Protein–RNA interactions for Protein: Q8N5U0

C11orf42, Uncharacterized protein C11orf42, humanhuman

Predictions only

Length 333 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C11orf42Q8N5U0 CDK11B-201ENST00000340677 2534 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
C11orf42Q8N5U0 PDZD3-203ENST00000525131 1882 ntTSL 2 BASIC15.61■□□□□ 0.09
C11orf42Q8N5U0 HOXB6-201ENST00000225648 1660 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
C11orf42Q8N5U0 ST3GAL4-205ENST00000449406 1669 ntTSL 5 BASIC15.61■□□□□ 0.09
C11orf42Q8N5U0 SLC6A18-201ENST00000324642 2121 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
C11orf42Q8N5U0 PCSK7-201ENST00000320934 4649 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
C11orf42Q8N5U0 AC018445.3-201ENST00000624177 1945 ntBASIC15.61■□□□□ 0.09
C11orf42Q8N5U0 RNF146-201ENST00000309649 2624 ntAPPRIS P3 TSL 4 BASIC15.61■□□□□ 0.09
C11orf42Q8N5U0 CEP55-201ENST00000371485 2638 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
C11orf42Q8N5U0 TMEM65-201ENST00000297632 9029 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
C11orf42Q8N5U0 AL161938.1-201ENST00000569833 2180 ntBASIC15.61■□□□□ 0.09
C11orf42Q8N5U0 POLR2D-202ENST00000409698 806 ntTSL 2 BASIC15.61■□□□□ 0.09
C11orf42Q8N5U0 ELF3-AS1-202ENST00000419190 788 ntTSL 2 BASIC15.61■□□□□ 0.09
C11orf42Q8N5U0 YPEL3-207ENST00000566134 761 ntTSL 5 BASIC15.61■□□□□ 0.09
C11orf42Q8N5U0 L34079.3-201ENST00000600242 546 ntTSL 4 BASIC15.61■□□□□ 0.09
C11orf42Q8N5U0 RPS27A-211ENST00000639844 606 ntTSL 5 BASIC15.61■□□□□ 0.09
C11orf42Q8N5U0 ZNF281-202ENST00000367352 2933 ntAPPRIS ALT2 TSL 2 BASIC15.61■□□□□ 0.09
C11orf42Q8N5U0 BMP8B-201ENST00000372827 4822 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
C11orf42Q8N5U0 RNF170-205ENST00000526349 1338 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
C11orf42Q8N5U0 ATF5-201ENST00000423777 2069 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
C11orf42Q8N5U0 SLC9A6-202ENST00000370698 4631 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
C11orf42Q8N5U0 HNRNPUL1-203ENST00000378215 2864 ntTSL 2 BASIC15.61■□□□□ 0.09
C11orf42Q8N5U0 CRYBB2P1-202ENST00000382734 1364 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
C11orf42Q8N5U0 C15orf56-202ENST00000623360 2129 ntTSL 2 BASIC15.61■□□□□ 0.09
C11orf42Q8N5U0 CLDND1-203ENST00000394181 2170 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
C11orf42Q8N5U0 ANKRD6-202ENST00000369408 5258 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
C11orf42Q8N5U0 SLC12A4-201ENST00000316341 4765 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
C11orf42Q8N5U0 ITGA9-201ENST00000264741 7889 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
C11orf42Q8N5U0 TRMT2A-203ENST00000404751 2498 ntAPPRIS ALT2 TSL 2 BASIC15.6■□□□□ 0.09
C11orf42Q8N5U0 FBXO24-201ENST00000241071 2276 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
C11orf42Q8N5U0 TSPAN4-204ENST00000397404 1462 ntAPPRIS P1 TSL 5 BASIC15.6■□□□□ 0.09
C11orf42Q8N5U0 KIF21B-203ENST00000422435 5519 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
C11orf42Q8N5U0 YBX3-201ENST00000228251 1796 ntAPPRIS P3 TSL 1 (best) BASIC15.6■□□□□ 0.09
C11orf42Q8N5U0 SRMS-201ENST00000217188 1516 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
C11orf42Q8N5U0 LAD1-202ENST00000391967 2906 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
C11orf42Q8N5U0 WRNIP1-202ENST00000380769 3239 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
C11orf42Q8N5U0 ZDHHC3-205ENST00000424952 2687 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
C11orf42Q8N5U0 FOXN3-214ENST00000557258 2692 ntAPPRIS P3 TSL 1 (best) BASIC15.6■□□□□ 0.09
C11orf42Q8N5U0 ZCCHC24-201ENST00000372333 906 ntTSL 2 BASIC15.6■□□□□ 0.09
C11orf42Q8N5U0 TRPT1-203ENST00000394547 865 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
C11orf42Q8N5U0 AC087499.1-201ENST00000418141 1075 ntBASIC15.6■□□□□ 0.09
C11orf42Q8N5U0 KRT8P12-201ENST00000468527 998 ntTSL 2 BASIC15.6■□□□□ 0.09
C11orf42Q8N5U0 ETS1-207ENST00000531611 2134 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
C11orf42Q8N5U0 SLC39A2-203ENST00000554422 1259 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
C11orf42Q8N5U0 SPTBN4-212ENST00000598249 8070 ntAPPRIS P2 TSL 1 (best) BASIC15.6■□□□□ 0.09
C11orf42Q8N5U0 AC010947.1-201ENST00000623454 693 ntBASIC15.6■□□□□ 0.09
C11orf42Q8N5U0 AC073912.3-201ENST00000624414 853 ntBASIC15.6■□□□□ 0.09
C11orf42Q8N5U0 ATG4B-226ENST00000625810 370 ntTSL 4 BASIC15.6■□□□□ 0.09
C11orf42Q8N5U0 TFDP2-202ENST00000467072 1853 ntAPPRIS P3 TSL 1 (best) BASIC15.6■□□□□ 0.09
C11orf42Q8N5U0 SAMD11-213ENST00000618181 2179 ntAPPRIS ALT2 TSL 5 BASIC15.6■□□□□ 0.09
C11orf42Q8N5U0 DCAF4-201ENST00000353777 1940 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
C11orf42Q8N5U0 SLC3A2-202ENST00000377889 1993 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
C11orf42Q8N5U0 NCF1-201ENST00000289473 1396 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
C11orf42Q8N5U0 PRMT1-201ENST00000391851 1393 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
C11orf42Q8N5U0 PCDHA4-201ENST00000378125 2328 ntTSL 5 BASIC15.6■□□□□ 0.09
C11orf42Q8N5U0 AR-207ENST00000612010 3896 ntTSL 5 BASIC15.6■□□□□ 0.09
C11orf42Q8N5U0 POFUT2-201ENST00000331343 4825 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
C11orf42Q8N5U0 PCCB-216ENST00000483687 1727 ntTSL 3 BASIC15.6■□□□□ 0.09
C11orf42Q8N5U0 CERS4-201ENST00000251363 1797 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
C11orf42Q8N5U0 TINCR-201ENST00000448587 3733 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
C11orf42Q8N5U0 ETV2-203ENST00000402764 1487 ntAPPRIS P3 TSL 1 (best) BASIC15.59■□□□□ 0.09
C11orf42Q8N5U0 KLHL2-201ENST00000226725 3134 ntAPPRIS P3 TSL 1 (best) BASIC15.59■□□□□ 0.09
C11orf42Q8N5U0 GALNT2-201ENST00000366672 4454 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
C11orf42Q8N5U0 QPCTL-202ENST00000366382 1814 ntTSL 2 BASIC15.59■□□□□ 0.09
C11orf42Q8N5U0 AC129492.1-201ENST00000399413 1804 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
C11orf42Q8N5U0 ABCC6-209ENST00000640696 1893 ntTSL 5 BASIC15.59■□□□□ 0.09
C11orf42Q8N5U0 TMEM214-201ENST00000238788 2990 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
C11orf42Q8N5U0 AL049812.1-201ENST00000432563 2267 ntBASIC15.59■□□□□ 0.09
C11orf42Q8N5U0 ADCY6-206ENST00000550422 5877 ntTSL 2 BASIC15.59■□□□□ 0.09
C11orf42Q8N5U0 MMD2-201ENST00000401401 2335 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
C11orf42Q8N5U0 MAFF-202ENST00000407965 2325 ntAPPRIS P1 TSL 2 BASIC15.59■□□□□ 0.09
C11orf42Q8N5U0 TMEM191A-208ENST00000450925 1961 ntTSL 2 BASIC15.59■□□□□ 0.09
C11orf42Q8N5U0 BNIP3L-206ENST00000523515 915 ntTSL 2 BASIC15.59■□□□□ 0.09
C11orf42Q8N5U0 RPS20-210ENST00000523936 899 ntTSL 2 BASIC15.59■□□□□ 0.09
C11orf42Q8N5U0 AC008763.3-201ENST00000597959 777 ntAPPRIS P1 TSL 4 BASIC15.59■□□□□ 0.09
C11orf42Q8N5U0 ANKRD54-211ENST00000609454 825 ntTSL 3 BASIC15.59■□□□□ 0.09
C11orf42Q8N5U0 ASMTL-201ENST00000381317 2027 ntAPPRIS P3 TSL 1 (best) BASIC15.59■□□□□ 0.09
C11orf42Q8N5U0 TTLL3-209ENST00000426895 2767 ntAPPRIS P2 TSL 2 BASIC15.59■□□□□ 0.09
C11orf42Q8N5U0 ARHGAP11A-208ENST00000567348 2422 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
C11orf42Q8N5U0 TDRKH-203ENST00000368824 2824 ntAPPRIS P2 TSL 1 (best) BASIC15.59■□□□□ 0.09
C11orf42Q8N5U0 SNAI3-AS1-202ENST00000563475 2081 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
C11orf42Q8N5U0 CALM2-201ENST00000272298 1302 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
C11orf42Q8N5U0 CWH43-201ENST00000226432 2472 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
C11orf42Q8N5U0 PTTG1IP-204ENST00000445724 2497 ntTSL 2 BASIC15.59■□□□□ 0.09
C11orf42Q8N5U0 LANCL3-201ENST00000378619 3063 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
C11orf42Q8N5U0 RUNX1-207ENST00000437180 5967 ntAPPRIS P3 TSL 5 BASIC15.59■□□□□ 0.09
C11orf42Q8N5U0 ZBTB33-201ENST00000326624 5211 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
C11orf42Q8N5U0 ADORA2A-213ENST00000610595 2736 ntAPPRIS P1 TSL 2 BASIC15.59■□□□□ 0.09
C11orf42Q8N5U0 AC106820.2-201ENST00000563775 3264 ntBASIC15.58■□□□□ 0.09
C11orf42Q8N5U0 ARID3A-201ENST00000263620 5941 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.09
C11orf42Q8N5U0 EIF2AK3-201ENST00000303236 4646 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.09
C11orf42Q8N5U0 SLC16A3-221ENST00000617373 2048 ntAPPRIS P1 TSL 5 BASIC15.58■□□□□ 0.09
C11orf42Q8N5U0 SLC16A3-222ENST00000619321 2015 ntAPPRIS P1 TSL 5 BASIC15.58■□□□□ 0.09
C11orf42Q8N5U0 SMPD3-203ENST00000563226 2093 ntTSL 1 (best) BASIC15.58■□□□□ 0.09
C11orf42Q8N5U0 EVPL-202ENST00000586740 6223 ntTSL 1 (best) BASIC15.58■□□□□ 0.09
C11orf42Q8N5U0 FAM118A-202ENST00000405673 1612 ntTSL 5 BASIC15.58■□□□□ 0.09
C11orf42Q8N5U0 STARD10-213ENST00000538536 1678 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
C11orf42Q8N5U0 TJP1-212ENST00000614355 6977 ntAPPRIS ALT2 TSL 5 BASIC15.58■□□□□ 0.08
C11orf42Q8N5U0 MXD3-202ENST00000427908 2269 ntTSL 2 BASIC15.58■□□□□ 0.08
C11orf42Q8N5U0 FKBP8-206ENST00000596558 1756 ntAPPRIS ALT1 TSL 2 BASIC15.58■□□□□ 0.08
Retrieved 100 of 98,524 protein–RNA pairs in 33 ms