Protein–RNA interactions for Protein: Q8N139

ABCA6, ATP-binding cassette sub-family A member 6, humanhuman

Predictions only

Length 1,617 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ABCA6Q8N139 SEPT4-201ENST00000317256 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC27.75■■■□□ 2.03
ABCA6Q8N139 GAS2L1-207ENST00000611648 2482 ntAPPRIS P1 TSL 2 BASIC27.75■■■□□ 2.03
ABCA6Q8N139 MGAT4B-201ENST00000292591 2446 ntAPPRIS P1 TSL 1 (best) BASIC27.75■■■□□ 2.03
ABCA6Q8N139 MRGPRF-AS1-201ENST00000538407 1490 ntTSL 1 (best) BASIC27.75■■■□□ 2.03
ABCA6Q8N139 ZAR1L-201ENST00000345108 1103 ntAPPRIS P1 TSL 1 (best) BASIC27.74■■■□□ 2.03
ABCA6Q8N139 WIPF1-203ENST00000392546 2180 ntAPPRIS P2 TSL 5 BASIC27.74■■■□□ 2.03
ABCA6Q8N139 CLDN6-202ENST00000396925 1739 ntAPPRIS P1 TSL 5 BASIC27.74■■■□□ 2.03
ABCA6Q8N139 CLDN14-205ENST00000399139 1231 ntAPPRIS P1 TSL 1 (best) BASIC27.74■■■□□ 2.03
ABCA6Q8N139 MRPL52-210ENST00000555345 895 ntTSL 2 BASIC27.74■■■□□ 2.03
ABCA6Q8N139 AC092118.1-202ENST00000568697 718 ntTSL 3 BASIC27.74■■■□□ 2.03
ABCA6Q8N139 SLC26A11-212ENST00000572725 1862 ntAPPRIS P1 TSL 1 (best) BASIC27.74■■■□□ 2.03
ABCA6Q8N139 PSMC3IP-204ENST00000587209 1381 ntTSL 1 (best) BASIC27.74■■■□□ 2.03
ABCA6Q8N139 C7orf43-201ENST00000316937 2520 ntAPPRIS P1 TSL 1 (best) BASIC27.74■■■□□ 2.03
ABCA6Q8N139 APLP1-203ENST00000586861 2052 ntTSL 2 BASIC27.74■■■□□ 2.03
ABCA6Q8N139 MAGEA6-201ENST00000329342 1740 ntAPPRIS P1 TSL 1 (best) BASIC27.74■■■□□ 2.03
ABCA6Q8N139 MAGEA3-201ENST00000370278 1724 ntAPPRIS P1 TSL 1 (best) BASIC27.74■■■□□ 2.03
ABCA6Q8N139 IDH1-205ENST00000446179 2298 ntAPPRIS P1 TSL 1 (best) BASIC27.74■■■□□ 2.03
ABCA6Q8N139 CCS-201ENST00000310190 942 ntTSL 5 BASIC27.74■■■□□ 2.03
ABCA6Q8N139 MIR564-202ENST00000385049 94 ntBASIC27.74■■■□□ 2.03
ABCA6Q8N139 CHMP3-203ENST00000409225 1099 ntTSL 2 BASIC27.74■■■□□ 2.03
ABCA6Q8N139 C2orf49-202ENST00000410049 854 ntTSL 1 (best) BASIC27.74■■■□□ 2.03
ABCA6Q8N139 AFG3L1P-210ENST00000431757 569 ntTSL 4 BASIC27.74■■■□□ 2.03
ABCA6Q8N139 TTLL12-204ENST00000494035 888 ntTSL 2 BASIC27.74■■■□□ 2.03
ABCA6Q8N139 RBM14-RBM4-203ENST00000500635 829 ntTSL 2 BASIC27.74■■■□□ 2.03
ABCA6Q8N139 SMAD3-210ENST00000559092 584 ntTSL 4 BASIC27.74■■■□□ 2.03
ABCA6Q8N139 ZPBP2-204ENST00000584588 1277 ntTSL 5 BASIC27.74■■■□□ 2.03
ABCA6Q8N139 LINC01607-201ENST00000607172 621 ntTSL 2 BASIC27.74■■■□□ 2.03
ABCA6Q8N139 IDI1-201ENST00000381344 2301 ntAPPRIS P1 TSL 1 (best) BASIC27.74■■■□□ 2.03
ABCA6Q8N139 GUCA1A-205ENST00000541991 1921 ntTSL 5 BASIC27.74■■■□□ 2.03
ABCA6Q8N139 REEP5-202ENST00000379638 3326 ntAPPRIS P1 TSL 1 (best) BASIC27.73■■■□□ 2.03
ABCA6Q8N139 ABHD14B-202ENST00000361143 1636 ntAPPRIS P1 TSL 1 (best) BASIC27.73■■■□□ 2.03
ABCA6Q8N139 Z82202.1-201ENST00000623446 1880 ntBASIC27.73■■■□□ 2.03
ABCA6Q8N139 TPD52-211ENST00000519303 1594 ntTSL 1 (best) BASIC27.73■■■□□ 2.03
ABCA6Q8N139 MORF4L2-AS1-201ENST00000435306 2086 ntTSL 1 (best) BASIC27.73■■■□□ 2.03
ABCA6Q8N139 FARSA-207ENST00000588025 2057 ntTSL 5 BASIC27.73■■■□□ 2.03
ABCA6Q8N139 MED17-221ENST00000639724 2317 ntTSL 5 BASIC27.73■■■□□ 2.03
ABCA6Q8N139 NR2F1-205ENST00000615873 1427 ntTSL 1 (best) BASIC27.73■■■□□ 2.03
ABCA6Q8N139 C17orf67-201ENST00000397861 2013 ntAPPRIS P1 TSL 1 (best) BASIC27.73■■■□□ 2.03
ABCA6Q8N139 TREX1-205ENST00000625293 1783 ntBASIC27.73■■■□□ 2.03
ABCA6Q8N139 TNNC1-201ENST00000232975 714 ntAPPRIS P1 TSL 1 (best) BASIC27.73■■■□□ 2.03
ABCA6Q8N139 HFE-210ENST00000470149 1123 ntAPPRIS ALT2 TSL 1 (best) BASIC27.73■■■□□ 2.03
ABCA6Q8N139 ENDOV-205ENST00000518644 625 ntTSL 4 BASIC27.73■■■□□ 2.03
ABCA6Q8N139 GABARAP-204ENST00000571253 837 ntTSL 2 BASIC27.73■■■□□ 2.03
ABCA6Q8N139 AC010327.4-202ENST00000591484 748 ntBASIC27.73■■■□□ 2.03
ABCA6Q8N139 SYNGR4-204ENST00000601610 859 ntTSL 3 BASIC27.73■■■□□ 2.03
ABCA6Q8N139 SUMO3-204ENST00000411651 1921 ntTSL 2 BASIC27.72■■■□□ 2.03
ABCA6Q8N139 TMC6-201ENST00000306591 1681 ntTSL 5 BASIC27.72■■■□□ 2.03
ABCA6Q8N139 GRB7-202ENST00000394204 1667 ntTSL 1 (best) BASIC27.72■■■□□ 2.03
ABCA6Q8N139 DNAJC1-202ENST00000376980 2106 ntAPPRIS P1 TSL 1 (best) BASIC27.72■■■□□ 2.03
ABCA6Q8N139 CFC1B-203ENST00000620207 1444 ntTSL 5 BASIC27.72■■■□□ 2.03
ABCA6Q8N139 PTH2-201ENST00000270631 459 ntAPPRIS P1 TSL 1 (best) BASIC27.72■■■□□ 2.03
ABCA6Q8N139 HES2-202ENST00000377836 507 ntTSL 2 BASIC27.72■■■□□ 2.03
ABCA6Q8N139 AL022314.1-201ENST00000414203 464 ntTSL 5 BASIC27.72■■■□□ 2.03
ABCA6Q8N139 RPL13AP23-201ENST00000480739 586 ntBASIC27.72■■■□□ 2.03
ABCA6Q8N139 AL049869.3-201ENST00000554918 558 ntTSL 3 BASIC27.72■■■□□ 2.03
ABCA6Q8N139 IRF8-202ENST00000562492 946 ntTSL 3 BASIC27.72■■■□□ 2.03
ABCA6Q8N139 AC099518.3-201ENST00000564808 809 ntAPPRIS P5 TSL 4 BASIC27.72■■■□□ 2.03
ABCA6Q8N139 PRKN-208ENST00000610470 531 ntTSL 2 BASIC27.72■■■□□ 2.03
ABCA6Q8N139 PRKN-209ENST00000612485 225 ntTSL 5 BASIC27.72■■■□□ 2.03
ABCA6Q8N139 AL355877.3-201ENST00000622820 899 ntBASIC27.72■■■□□ 2.03
ABCA6Q8N139 ESAM-201ENST00000278927 1826 ntAPPRIS P1 TSL 1 (best) BASIC27.72■■■□□ 2.03
ABCA6Q8N139 TRMU-201ENST00000290846 1940 ntAPPRIS P1 TSL 1 (best) BASIC27.72■■■□□ 2.03
ABCA6Q8N139 ACY1-201ENST00000404366 1473 ntAPPRIS P1 TSL 1 (best) BASIC27.72■■■□□ 2.03
ABCA6Q8N139 C19orf66-201ENST00000253110 2117 ntAPPRIS P3 TSL 2 BASIC27.72■■■□□ 2.03
ABCA6Q8N139 TRIM46-204ENST00000368385 1864 ntTSL 1 (best) BASIC27.72■■■□□ 2.03
ABCA6Q8N139 AGER-205ENST00000375069 1538 ntTSL 1 (best) BASIC27.72■■■□□ 2.03
ABCA6Q8N139 CELF6-202ENST00000395258 1741 ntTSL 5 BASIC27.72■■■□□ 2.03
ABCA6Q8N139 HGFAC-204ENST00000511533 2016 ntTSL 1 (best) BASIC27.71■■■□□ 2.03
ABCA6Q8N139 IKBKG-207ENST00000611071 2103 ntAPPRIS P3 TSL 1 (best) BASIC27.71■■■□□ 2.03
ABCA6Q8N139 AC021188.1-201ENST00000421534 740 ntTSL 3 BASIC27.71■■■□□ 2.03
ABCA6Q8N139 NCBP2-AS1-201ENST00000447775 562 ntTSL 5 BASIC27.71■■■□□ 2.03
ABCA6Q8N139 AC055717.3-201ENST00000622967 595 ntBASIC27.71■■■□□ 2.03
ABCA6Q8N139 KRT8P32-201ENST00000512863 1461 ntBASIC27.71■■■□□ 2.03
ABCA6Q8N139 TEX264-215ENST00000611400 1488 ntAPPRIS P3 TSL 5 BASIC27.71■■■□□ 2.03
ABCA6Q8N139 MSL1-204ENST00000578648 2267 ntTSL 5 BASIC27.71■■■□□ 2.03
ABCA6Q8N139 DAZAP2-201ENST00000412716 2598 ntAPPRIS P1 TSL 1 (best) BASIC27.71■■■□□ 2.03
ABCA6Q8N139 RHOV-201ENST00000220507 1705 ntAPPRIS P1 TSL 1 (best) BASIC27.71■■■□□ 2.03
ABCA6Q8N139 ARSI-203ENST00000515301 1429 ntTSL 4 BASIC27.71■■■□□ 2.03
ABCA6Q8N139 ST3GAL3-219ENST00000372374 2170 ntTSL 5 BASIC27.71■■■□□ 2.03
ABCA6Q8N139 RAB34-204ENST00000395245 1766 ntAPPRIS P1 TSL 1 (best) BASIC27.71■■■□□ 2.03
ABCA6Q8N139 HBZ-201ENST00000252951 755 ntAPPRIS P1 TSL 1 (best) BASIC27.7■■■□□ 2.03
ABCA6Q8N139 CSF3-203ENST00000394148 622 ntTSL 3 BASIC27.7■■■□□ 2.03
ABCA6Q8N139 BIRC7-203ENST00000395306 593 ntTSL 2 BASIC27.7■■■□□ 2.03
ABCA6Q8N139 POM121L3P-201ENST00000419331 1163 ntBASIC27.7■■■□□ 2.03
ABCA6Q8N139 AC013356.2-201ENST00000559730 729 ntTSL 3 BASIC27.7■■■□□ 2.03
ABCA6Q8N139 AP001269.4-201ENST00000609611 512 ntBASIC27.7■■■□□ 2.03
ABCA6Q8N139 FAM215A-202ENST00000632077 792 ntBASIC27.7■■■□□ 2.03
ABCA6Q8N139 SSH3-202ENST00000308298 2046 ntTSL 2 BASIC27.7■■■□□ 2.03
ABCA6Q8N139 PKMYT1-201ENST00000262300 2171 ntTSL 1 (best) BASIC27.7■■■□□ 2.03
ABCA6Q8N139 CLN3-216ENST00000565316 1318 ntTSL 1 (best) BASIC27.7■■■□□ 2.03
ABCA6Q8N139 FBXW8-201ENST00000309909 2343 ntAPPRIS P1 TSL 1 (best) BASIC27.7■■■□□ 2.03
ABCA6Q8N139 SETMAR-206ENST00000430981 1671 ntTSL 1 (best) BASIC27.7■■■□□ 2.02
ABCA6Q8N139 GPSM1-206ENST00000616132 2270 ntTSL 1 (best) BASIC27.7■■■□□ 2.02
ABCA6Q8N139 MYBL2-201ENST00000217026 2639 ntAPPRIS P1 TSL 1 (best) BASIC27.7■■■□□ 2.02
ABCA6Q8N139 LAMTOR5-201ENST00000256644 868 ntTSL 1 (best) BASIC27.7■■■□□ 2.02
ABCA6Q8N139 KLK12-202ENST00000319590 1074 ntAPPRIS ALT2 TSL 5 BASIC27.7■■■□□ 2.02
ABCA6Q8N139 TNFSF13-204ENST00000396542 726 ntTSL 3 BASIC27.7■■■□□ 2.02
ABCA6Q8N139 CR559946.1-201ENST00000453835 531 ntTSL 4 BASIC27.7■■■□□ 2.02
ABCA6Q8N139 SCARNA2-201ENST00000458748 420 ntBASIC27.7■■■□□ 2.02
ABCA6Q8N139 LAMTOR5-204ENST00000483260 694 ntTSL 2 BASIC27.7■■■□□ 2.02
Retrieved 100 of 98,524 protein–RNA pairs in 24.4 ms