Protein–RNA interactions for Protein: Q8IZC6

COL27A1, Collagen alpha-1(XXVII) chain, humanhuman

Predicted RBP Predictions only

Length 1,860 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL27A1Q8IZC6 MAL-203ENST00000353004 873 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
COL27A1Q8IZC6 ROMO1-204ENST00000374078 498 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
COL27A1Q8IZC6 TEX30-205ENST00000376029 959 ntTSL 2 BASIC17.65■□□□□ 0.42
COL27A1Q8IZC6 PLXND1-205ENST00000504689 546 ntTSL 3 BASIC17.65■□□□□ 0.42
COL27A1Q8IZC6 CCDC61-201ENST00000536603 1282 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
COL27A1Q8IZC6 ISCU-208ENST00000539593 1071 ntTSL 2 BASIC17.65■□□□□ 0.42
COL27A1Q8IZC6 AC016876.1-204ENST00000573187 679 ntTSL 3 BASIC17.65■□□□□ 0.42
COL27A1Q8IZC6 AC068594.1-202ENST00000581657 749 ntTSL 3 BASIC17.65■□□□□ 0.42
COL27A1Q8IZC6 SRSF1-209ENST00000585096 568 ntTSL 4 BASIC17.65■□□□□ 0.42
COL27A1Q8IZC6 AC087289.1-201ENST00000586808 890 ntTSL 5 BASIC17.65■□□□□ 0.42
COL27A1Q8IZC6 SCRN2-202ENST00000407215 1779 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
COL27A1Q8IZC6 TRIP4-201ENST00000261884 2045 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
COL27A1Q8IZC6 BIN1-207ENST00000357970 2497 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
COL27A1Q8IZC6 TDRP-202ENST00000427263 2465 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
COL27A1Q8IZC6 FEM1AP3-201ENST00000403722 1741 ntBASIC17.65■□□□□ 0.42
COL27A1Q8IZC6 TPSD1-201ENST00000211076 1499 ntAPPRIS P2 TSL 1 (best) BASIC17.65■□□□□ 0.42
COL27A1Q8IZC6 TRIM13-206ENST00000457662 1489 ntAPPRIS P3 TSL 1 (best) BASIC17.65■□□□□ 0.42
COL27A1Q8IZC6 ZNF707-201ENST00000358656 2183 ntAPPRIS P1 TSL 2 BASIC17.65■□□□□ 0.42
COL27A1Q8IZC6 TMEM44-203ENST00000381975 2197 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
COL27A1Q8IZC6 MRPS5-201ENST00000272418 1652 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
COL27A1Q8IZC6 TEX264-209ENST00000457573 1448 ntAPPRIS P3 TSL 5 BASIC17.65■□□□□ 0.42
COL27A1Q8IZC6 SCAND1-203ENST00000615116 1371 ntAPPRIS P1 TSL 5 BASIC17.65■□□□□ 0.42
COL27A1Q8IZC6 BYSL-201ENST00000230340 2029 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
COL27A1Q8IZC6 PLSCR3-212ENST00000576201 1965 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
COL27A1Q8IZC6 RNF135-201ENST00000324689 1905 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
COL27A1Q8IZC6 ENTPD6-203ENST00000376652 2750 ntAPPRIS P3 TSL 1 (best) BASIC17.65■□□□□ 0.42
COL27A1Q8IZC6 TSPY2-201ENST00000320701 1161 ntAPPRIS P5 TSL 1 (best) BASIC17.65■□□□□ 0.42
COL27A1Q8IZC6 EMD-201ENST00000369835 966 ntTSL 3 BASIC17.65■□□□□ 0.42
COL27A1Q8IZC6 TSPY2-203ENST00000429039 779 ntAPPRIS ALT2 TSL 2 BASIC17.65■□□□□ 0.42
COL27A1Q8IZC6 UBXN10-AS1-201ENST00000442226 510 ntTSL 2 BASIC17.65■□□□□ 0.42
COL27A1Q8IZC6 AC018712.1-201ENST00000455767 687 ntBASIC17.65■□□□□ 0.42
COL27A1Q8IZC6 PPIE-208ENST00000470213 927 ntTSL 3 BASIC17.65■□□□□ 0.42
COL27A1Q8IZC6 SAXO2-206ENST00000566205 340 ntAPPRIS ALT2 TSL 2 BASIC17.65■□□□□ 0.42
COL27A1Q8IZC6 MUC1-224ENST00000611577 1023 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
COL27A1Q8IZC6 AL773604.1-201ENST00000617417 272 ntBASIC17.65■□□□□ 0.42
COL27A1Q8IZC6 EIF2B1-201ENST00000424014 2477 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.42
COL27A1Q8IZC6 PCBP4-212ENST00000484633 2009 ntTSL 5 BASIC17.64■□□□□ 0.42
COL27A1Q8IZC6 TTC12-202ENST00000393020 2541 ntTSL 5 BASIC17.64■□□□□ 0.41
COL27A1Q8IZC6 ZNF667-AS1-201ENST00000585445 1521 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
COL27A1Q8IZC6 CXCR3-201ENST00000373691 1861 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
COL27A1Q8IZC6 EEF1AKMT2-201ENST00000368836 1462 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
COL27A1Q8IZC6 POLI-202ENST00000406285 2030 ntTSL 2 BASIC17.64■□□□□ 0.41
COL27A1Q8IZC6 GALNS-201ENST00000268695 2363 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
COL27A1Q8IZC6 RNASEH2A-201ENST00000221486 1165 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
COL27A1Q8IZC6 C1QC-203ENST00000374640 1163 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
COL27A1Q8IZC6 EXOSC3-202ENST00000396521 768 ntTSL 2 BASIC17.64■□□□□ 0.41
COL27A1Q8IZC6 MMP24-AS1-201ENST00000424358 867 ntAPPRIS P1 TSL 2 BASIC17.64■□□□□ 0.41
COL27A1Q8IZC6 MMP24-AS1-209ENST00000456790 712 ntAPPRIS P1 TSL 2 BASIC17.64■□□□□ 0.41
COL27A1Q8IZC6 SLC25A1P1-201ENST00000528351 927 ntBASIC17.64■□□□□ 0.41
COL27A1Q8IZC6 HSP90B1-211ENST00000640977 1127 ntTSL 5 BASIC17.64■□□□□ 0.41
COL27A1Q8IZC6 ARSI-203ENST00000515301 1429 ntTSL 4 BASIC17.64■□□□□ 0.41
COL27A1Q8IZC6 ZNF420-201ENST00000304239 1945 ntTSL 2 BASIC17.64■□□□□ 0.41
COL27A1Q8IZC6 TICAM1-202ENST00000621756 1650 ntTSL 5 BASIC17.64■□□□□ 0.41
COL27A1Q8IZC6 NKX6-1-202ENST00000515820 2194 ntTSL 3 BASIC17.64■□□□□ 0.41
COL27A1Q8IZC6 MAP7-206ENST00000611373 2317 ntAPPRIS ALT2 TSL 5 BASIC17.63■□□□□ 0.41
COL27A1Q8IZC6 ARMC6-201ENST00000269932 2412 ntAPPRIS P1 TSL 5 BASIC17.63■□□□□ 0.41
COL27A1Q8IZC6 STARD3-202ENST00000394250 1949 ntTSL 2 BASIC17.63■□□□□ 0.41
COL27A1Q8IZC6 IQSEC3-201ENST00000382841 2701 ntAPPRIS P3 TSL 2 BASIC17.63■□□□□ 0.41
COL27A1Q8IZC6 CEP85L-205ENST00000419517 2079 ntAPPRIS P3 TSL 1 (best) BASIC17.63■□□□□ 0.41
COL27A1Q8IZC6 CD320-201ENST00000301458 1250 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
COL27A1Q8IZC6 ANKRD37-201ENST00000335174 1141 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
COL27A1Q8IZC6 COX6C-204ENST00000520271 571 ntAPPRIS P1 TSL 2 BASIC17.63■□□□□ 0.41
COL27A1Q8IZC6 FLT3LG-206ENST00000597551 951 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
COL27A1Q8IZC6 BX640515.1-201ENST00000617215 977 ntBASIC17.63■□□□□ 0.41
COL27A1Q8IZC6 UBL4A-202ENST00000369660 2382 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
COL27A1Q8IZC6 SMN1-204ENST00000506163 1445 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
COL27A1Q8IZC6 P2RY6-207ENST00000538328 1425 ntAPPRIS P1 TSL 3 BASIC17.63■□□□□ 0.41
COL27A1Q8IZC6 NDUFA10-203ENST00000404554 1557 ntTSL 5 BASIC17.63■□□□□ 0.41
COL27A1Q8IZC6 TRIM46-204ENST00000368385 1864 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
COL27A1Q8IZC6 TMPRSS5-212ENST00000545579 2163 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
COL27A1Q8IZC6 MAIP1-202ENST00000392290 1386 ntAPPRIS P2 TSL 1 (best) BASIC17.63■□□□□ 0.41
COL27A1Q8IZC6 CELF6-204ENST00000543764 1676 ntTSL 2 BASIC17.63■□□□□ 0.41
COL27A1Q8IZC6 AC141586.3-201ENST00000562166 1838 ntBASIC17.63■□□□□ 0.41
COL27A1Q8IZC6 PLD6-201ENST00000321560 2560 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
COL27A1Q8IZC6 IL9RP2-201ENST00000423948 1312 ntBASIC17.63■□□□□ 0.41
COL27A1Q8IZC6 TFAP2A-202ENST00000379608 2576 ntAPPRIS ALT1 TSL 1 (best) BASIC17.63■□□□□ 0.41
COL27A1Q8IZC6 DNAJB5-203ENST00000453597 2589 ntTSL 2 BASIC17.63■□□□□ 0.41
COL27A1Q8IZC6 SPIN2B-202ENST00000333933 1258 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
COL27A1Q8IZC6 ATP5G2-204ENST00000549164 745 ntAPPRIS P1 TSL 3 BASIC17.63■□□□□ 0.41
COL27A1Q8IZC6 AP001005.1-201ENST00000571755 1248 ntBASIC17.63■□□□□ 0.41
COL27A1Q8IZC6 CALM3-211ENST00000598871 561 ntTSL 4 BASIC17.63■□□□□ 0.41
COL27A1Q8IZC6 ATP5G2-209ENST00000602871 668 ntAPPRIS P1 TSL 2 BASIC17.63■□□□□ 0.41
COL27A1Q8IZC6 SIX5-203ENST00000560168 1975 ntTSL 4 BASIC17.63■□□□□ 0.41
COL27A1Q8IZC6 PCDHB11-202ENST00000624887 1973 ntTSL 2 BASIC17.63■□□□□ 0.41
COL27A1Q8IZC6 NFYC-AS1-201ENST00000606277 1687 ntBASIC17.62■□□□□ 0.41
COL27A1Q8IZC6 AC243591.1-201ENST00000452967 1364 ntBASIC17.62■□□□□ 0.41
COL27A1Q8IZC6 NFKBIE-204ENST00000619360 2327 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
COL27A1Q8IZC6 ST7-201ENST00000265437 2899 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
COL27A1Q8IZC6 FCN3-201ENST00000270879 1030 ntAPPRIS P4 TSL 1 (best) BASIC17.62■□□□□ 0.41
COL27A1Q8IZC6 NPFFR2-202ENST00000344413 1234 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
COL27A1Q8IZC6 FCN3-202ENST00000354982 997 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
COL27A1Q8IZC6 AC139749.1-201ENST00000534584 1094 ntTSL 3 BASIC17.62■□□□□ 0.41
COL27A1Q8IZC6 TSFM-208ENST00000543727 651 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
COL27A1Q8IZC6 AC099518.3-201ENST00000564808 809 ntAPPRIS P5 TSL 4 BASIC17.62■□□□□ 0.41
COL27A1Q8IZC6 DISC1-212ENST00000535983 2505 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
COL27A1Q8IZC6 AL353692.3-201ENST00000407031 1396 ntBASIC17.62■□□□□ 0.41
COL27A1Q8IZC6 MAP3K14-AS1-203ENST00000585780 2475 ntTSL 2 BASIC17.62■□□□□ 0.41
COL27A1Q8IZC6 ARHGAP22-210ENST00000477708 1951 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
COL27A1Q8IZC6 LINC00466-207ENST00000634725 1736 ntTSL 5 BASIC17.62■□□□□ 0.41
COL27A1Q8IZC6 B3GAT3-202ENST00000531383 2056 ntTSL 2 BASIC17.62■□□□□ 0.41
Retrieved 100 of 98,524 protein–RNA pairs in 26.2 ms