Protein–RNA interactions for Protein: Q86WJ1

CHD1L, Chromodomain-helicase-DNA-binding protein 1-like, humanhuman

Predictions only

Length 897 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHD1LQ86WJ1 ZNF419-205ENST00000424930 2323 ntAPPRIS ALT2 TSL 1 (best) BASIC23.19■■□□□ 1.3
CHD1LQ86WJ1 MINOS1-NBL1-204ENST00000602662 1623 ntAPPRIS P1 TSL 2 BASIC23.19■■□□□ 1.3
CHD1LQ86WJ1 CBFA2T2-201ENST00000342704 2864 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
CHD1LQ86WJ1 PTPA-201ENST00000337738 2845 ntTSL 2 BASIC23.18■■□□□ 1.3
CHD1LQ86WJ1 CHST2-201ENST00000309575 4582 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
CHD1LQ86WJ1 IFNLR1-202ENST00000327575 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC23.18■■□□□ 1.3
CHD1LQ86WJ1 PRDM1-202ENST00000369091 2612 ntTSL 1 (best) BASIC23.18■■□□□ 1.3
CHD1LQ86WJ1 FAM49B-214ENST00000519540 2021 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
CHD1LQ86WJ1 CD248-201ENST00000311330 2558 ntAPPRIS P1 BASIC23.18■■□□□ 1.3
CHD1LQ86WJ1 KDM4B-202ENST00000381759 3058 ntTSL 1 (best) BASIC23.18■■□□□ 1.3
CHD1LQ86WJ1 PROB1-201ENST00000434752 5122 ntAPPRIS P1 BASIC23.18■■□□□ 1.3
CHD1LQ86WJ1 C1orf198-201ENST00000366663 3858 ntAPPRIS P3 TSL 1 (best) BASIC23.18■■□□□ 1.3
CHD1LQ86WJ1 AC012618.2-201ENST00000428058 849 ntBASIC23.18■■□□□ 1.3
CHD1LQ86WJ1 FAM86C2P-201ENST00000525180 435 ntTSL 4 BASIC23.18■■□□□ 1.3
CHD1LQ86WJ1 TARBP2-220ENST00000552857 916 ntTSL 5 BASIC23.18■■□□□ 1.3
CHD1LQ86WJ1 CHEK2P2-202ENST00000555186 864 ntTSL 2 BASIC23.18■■□□□ 1.3
CHD1LQ86WJ1 AL049637.2-201ENST00000641778 930 ntBASIC23.18■■□□□ 1.3
CHD1LQ86WJ1 TRIM41-202ENST00000351937 2696 ntTSL 1 (best) BASIC23.18■■□□□ 1.3
CHD1LQ86WJ1 PJA1-202ENST00000374571 2672 ntAPPRIS ALT2 TSL 1 (best) BASIC23.18■■□□□ 1.3
CHD1LQ86WJ1 DMRT3-201ENST00000190165 2183 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
CHD1LQ86WJ1 ETS1-207ENST00000531611 2134 ntTSL 1 (best) BASIC23.18■■□□□ 1.3
CHD1LQ86WJ1 CBS-203ENST00000398158 2453 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
CHD1LQ86WJ1 HLA-G-205ENST00000428701 1578 ntAPPRIS P2 BASIC23.18■■□□□ 1.3
CHD1LQ86WJ1 CBSL-206ENST00000624406 2453 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
CHD1LQ86WJ1 LEFTY2-201ENST00000366820 2287 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
CHD1LQ86WJ1 TWIST2-202ENST00000612363 1404 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
CHD1LQ86WJ1 CLN3-206ENST00000360019 1840 ntTSL 2 BASIC23.17■■□□□ 1.3
CHD1LQ86WJ1 EEF1D-205ENST00000442189 2207 ntAPPRIS P4 TSL 1 (best) BASIC23.17■■□□□ 1.3
CHD1LQ86WJ1 MUTYH-202ENST00000355498 1776 ntAPPRIS ALT2 TSL 1 (best) BASIC23.17■■□□□ 1.3
CHD1LQ86WJ1 TMEM104-202ENST00000417024 1781 ntTSL 2 BASIC23.17■■□□□ 1.3
CHD1LQ86WJ1 ASB7-203ENST00000558747 2133 ntTSL 5 BASIC23.17■■□□□ 1.3
CHD1LQ86WJ1 SYT15-205ENST00000503753 1331 ntAPPRIS ALT2 TSL 1 (best) BASIC23.17■■□□□ 1.3
CHD1LQ86WJ1 PPP2R2C-206ENST00000507294 1667 ntTSL 2 BASIC23.17■■□□□ 1.3
CHD1LQ86WJ1 SLC2A14-214ENST00000542505 1650 ntTSL 1 (best) BASIC23.17■■□□□ 1.3
CHD1LQ86WJ1 SNX17-201ENST00000233575 2044 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
CHD1LQ86WJ1 PRELID3A-209ENST00000592149 2001 ntTSL 2 BASIC23.17■■□□□ 1.3
CHD1LQ86WJ1 FMR1-202ENST00000334557 1295 ntTSL 1 (best) BASIC23.17■■□□□ 1.3
CHD1LQ86WJ1 C9orf129-201ENST00000375419 1154 ntAPPRIS P1 TSL 5 BASIC23.17■■□□□ 1.3
CHD1LQ86WJ1 VSIG2-202ENST00000403470 1191 ntTSL 2 BASIC23.17■■□□□ 1.3
CHD1LQ86WJ1 AC091153.3-201ENST00000497885 472 ntTSL 2 BASIC23.17■■□□□ 1.3
CHD1LQ86WJ1 AL691442.1-201ENST00000505139 1042 ntAPPRIS P1 TSL 2 BASIC23.17■■□□□ 1.3
CHD1LQ86WJ1 CBLN3-202ENST00000555436 718 ntTSL 3 BASIC23.17■■□□□ 1.3
CHD1LQ86WJ1 DGCR10-201ENST00000609839 495 ntBASIC23.17■■□□□ 1.3
CHD1LQ86WJ1 FAM219B-204ENST00000563119 2721 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
CHD1LQ86WJ1 TCTN1-225ENST00000551590 2309 ntAPPRIS ALT2 TSL 1 (best) BASIC23.17■■□□□ 1.3
CHD1LQ86WJ1 AGAP1-205ENST00000409538 6138 ntTSL 5 BASIC23.17■■□□□ 1.3
CHD1LQ86WJ1 AC139491.1-201ENST00000512675 1516 ntTSL 1 (best) BASIC23.17■■□□□ 1.3
CHD1LQ86WJ1 OGFOD2-222ENST00000545317 1481 ntTSL 2 BASIC23.17■■□□□ 1.3
CHD1LQ86WJ1 AC079598.2-202ENST00000546624 1451 ntBASIC23.17■■□□□ 1.3
CHD1LQ86WJ1 CYP2D6-201ENST00000359033 1433 ntTSL 1 (best) BASIC23.16■■□□□ 1.3
CHD1LQ86WJ1 KHDC1-202ENST00000370384 1430 ntAPPRIS ALT2 TSL 1 (best) BASIC23.16■■□□□ 1.3
CHD1LQ86WJ1 KRT8P45-201ENST00000414328 1447 ntBASIC23.16■■□□□ 1.3
CHD1LQ86WJ1 EFHC1-206ENST00000635760 2030 ntTSL 5 BASIC23.16■■□□□ 1.3
CHD1LQ86WJ1 GGNBP2-210ENST00000611219 2315 ntTSL 2 BASIC23.16■■□□□ 1.3
CHD1LQ86WJ1 TRIM74-201ENST00000285805 1350 ntAPPRIS P2 TSL 1 (best) BASIC23.16■■□□□ 1.3
CHD1LQ86WJ1 TRIM73-201ENST00000323819 1358 ntAPPRIS P2 TSL 1 (best) BASIC23.16■■□□□ 1.3
CHD1LQ86WJ1 RBP4-202ENST00000371467 1314 ntAPPRIS P1 TSL 5 BASIC23.16■■□□□ 1.3
CHD1LQ86WJ1 ECE1-203ENST00000374893 2484 ntTSL 1 (best) BASIC23.16■■□□□ 1.3
CHD1LQ86WJ1 SPART-209ENST00000494062 3018 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
CHD1LQ86WJ1 PHF12-201ENST00000268756 2957 ntTSL 1 (best) BASIC23.16■■□□□ 1.3
CHD1LQ86WJ1 WDR74-201ENST00000278856 1289 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
CHD1LQ86WJ1 LIME1-201ENST00000309546 1178 ntAPPRIS P3 TSL 1 (best) BASIC23.16■■□□□ 1.3
CHD1LQ86WJ1 MAPKAPK2-202ENST00000367103 2961 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
CHD1LQ86WJ1 PMVK-201ENST00000368467 1280 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
CHD1LQ86WJ1 PMEPA1-204ENST00000395814 800 ntTSL 3 BASIC23.16■■□□□ 1.3
CHD1LQ86WJ1 GLYCTK-205ENST00000473032 935 ntTSL 1 (best) BASIC23.16■■□□□ 1.3
CHD1LQ86WJ1 FDX2-206ENST00000492239 773 ntTSL 2 BASIC23.16■■□□□ 1.3
CHD1LQ86WJ1 USP46-AS1-201ENST00000503051 1048 ntTSL 3 BASIC23.16■■□□□ 1.3
CHD1LQ86WJ1 RRN3-205ENST00000563559 2128 ntTSL 5 BASIC23.16■■□□□ 1.3
CHD1LQ86WJ1 REXO1L10P-201ENST00000615707 1290 ntBASIC23.16■■□□□ 1.3
CHD1LQ86WJ1 REXO1L12P-201ENST00000622156 912 ntBASIC23.16■■□□□ 1.3
CHD1LQ86WJ1 SRMS-201ENST00000217188 1516 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
CHD1LQ86WJ1 KRT6A-201ENST00000330722 2310 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
CHD1LQ86WJ1 BIRC8-201ENST00000426466 2026 ntAPPRIS P1 BASIC23.16■■□□□ 1.3
CHD1LQ86WJ1 AC008556.1-201ENST00000610908 2040 ntBASIC23.16■■□□□ 1.3
CHD1LQ86WJ1 UBTF-202ENST00000343638 4684 ntTSL 1 (best) BASIC23.16■■□□□ 1.3
CHD1LQ86WJ1 BMP2K-208ENST00000628286 3848 ntAPPRIS ALT2 TSL 5 BASIC23.16■■□□□ 1.3
CHD1LQ86WJ1 CPAMD8-202ENST00000388925 5355 ntTSL 5 BASIC23.16■■□□□ 1.3
CHD1LQ86WJ1 OGFOD3-202ENST00000329197 1652 ntTSL 1 (best) BASIC23.16■■□□□ 1.3
CHD1LQ86WJ1 AL109659.2-201ENST00000606809 1674 ntBASIC23.16■■□□□ 1.3
CHD1LQ86WJ1 PSPC1-201ENST00000338910 2407 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
CHD1LQ86WJ1 MME-217ENST00000616757 1315 ntTSL 5 BASIC23.15■■□□□ 1.3
CHD1LQ86WJ1 POLR2D-202ENST00000409698 806 ntTSL 2 BASIC23.15■■□□□ 1.3
CHD1LQ86WJ1 MFAP1P1-201ENST00000442257 1255 ntBASIC23.15■■□□□ 1.3
CHD1LQ86WJ1 AC092718.1-201ENST00000501068 1088 ntTSL 1 (best) BASIC23.15■■□□□ 1.3
CHD1LQ86WJ1 PENK-204ENST00000518770 863 ntTSL 2 BASIC23.15■■□□□ 1.3
CHD1LQ86WJ1 SLC25A1P4-201ENST00000567977 778 ntBASIC23.15■■□□□ 1.3
CHD1LQ86WJ1 AC003005.1-201ENST00000601674 582 ntAPPRIS P5 TSL 2 BASIC23.15■■□□□ 1.3
CHD1LQ86WJ1 Z99916.2-201ENST00000604037 246 ntBASIC23.15■■□□□ 1.3
CHD1LQ86WJ1 AC097662.2-201ENST00000641359 267 ntAPPRIS P1 BASIC23.15■■□□□ 1.3
CHD1LQ86WJ1 C14orf180-201ENST00000331952 1455 ntAPPRIS ALT2 TSL 2 BASIC23.15■■□□□ 1.3
CHD1LQ86WJ1 ZCWPW1-201ENST00000360951 2110 ntAPPRIS ALT2 TSL 2 BASIC23.15■■□□□ 1.3
CHD1LQ86WJ1 TTLL3-209ENST00000426895 2767 ntAPPRIS P2 TSL 2 BASIC23.15■■□□□ 1.3
CHD1LQ86WJ1 HAPLN4-201ENST00000291481 3449 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
CHD1LQ86WJ1 SEMA3B-209ENST00000456560 2221 ntTSL 1 (best) BASIC23.14■■□□□ 1.3
CHD1LQ86WJ1 PRMT1-201ENST00000391851 1393 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.3
CHD1LQ86WJ1 ECHDC1-214ENST00000474289 2443 ntAPPRIS P3 TSL 5 BASIC23.14■■□□□ 1.3
CHD1LQ86WJ1 NADK-201ENST00000341426 3235 ntAPPRIS P3 TSL 2 BASIC23.14■■□□□ 1.3
CHD1LQ86WJ1 SERPINE2-201ENST00000258405 2195 ntAPPRIS P3 TSL 1 (best) BASIC23.14■■□□□ 1.3
CHD1LQ86WJ1 ANKRD18DP-201ENST00000335478 2171 ntTSL 2 BASIC23.14■■□□□ 1.3
Retrieved 100 of 98,524 protein–RNA pairs in 39.6 ms