Protein–RNA interactions for Protein: Q7Z5J4

RAI1, Retinoic acid-induced protein 1, humanhuman

Predicted RBP Predictions only

Length 1,906 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAI1Q7Z5J4 C1QTNF1-209ENST00000581774 1368 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
RAI1Q7Z5J4 EPN3-216ENST00000537145 2223 ntTSL 5 BASIC15.99■□□□□ 0.15
RAI1Q7Z5J4 MTFR1L-202ENST00000374301 2099 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
RAI1Q7Z5J4 COL9A3-201ENST00000343916 2485 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
RAI1Q7Z5J4 TPD52-209ENST00000518937 2856 ntTSL 2 BASIC15.98■□□□□ 0.15
RAI1Q7Z5J4 HGFAC-204ENST00000511533 2016 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
RAI1Q7Z5J4 CCDC74A-206ENST00000467992 1347 ntAPPRIS ALT2 TSL 1 (best) BASIC15.98■□□□□ 0.15
RAI1Q7Z5J4 PDZD3-203ENST00000525131 1882 ntTSL 2 BASIC15.98■□□□□ 0.15
RAI1Q7Z5J4 AL049812.1-201ENST00000432563 2267 ntBASIC15.98■□□□□ 0.15
RAI1Q7Z5J4 INSM1-201ENST00000310227 2829 ntAPPRIS P1 BASIC15.98■□□□□ 0.15
RAI1Q7Z5J4 SPNS1-201ENST00000311008 2208 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
RAI1Q7Z5J4 CT47A4-201ENST00000415858 1298 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
RAI1Q7Z5J4 CT47A9-201ENST00000417256 1298 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
RAI1Q7Z5J4 CT47A6-201ENST00000419194 1298 ntAPPRIS P1 TSL 5 BASIC15.98■□□□□ 0.15
RAI1Q7Z5J4 CT47A10-201ENST00000430448 1298 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
RAI1Q7Z5J4 AL591212.1-201ENST00000433646 615 ntTSL 5 BASIC15.98■□□□□ 0.15
RAI1Q7Z5J4 CT47A5-201ENST00000439466 1298 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
RAI1Q7Z5J4 CT47A3-201ENST00000441330 1298 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
RAI1Q7Z5J4 AC079781.3-201ENST00000449110 356 ntBASIC15.98■□□□□ 0.15
RAI1Q7Z5J4 CT47A8-201ENST00000457977 1298 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
RAI1Q7Z5J4 CT47A2-201ENST00000458218 1298 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
RAI1Q7Z5J4 GSTZ1-218ENST00000557053 580 ntTSL 3 BASIC15.98■□□□□ 0.15
RAI1Q7Z5J4 AL691432.3-201ENST00000621860 400 ntBASIC15.98■□□□□ 0.15
RAI1Q7Z5J4 PAQR6-201ENST00000292291 1908 ntAPPRIS P3 TSL 1 (best) BASIC15.98■□□□□ 0.15
RAI1Q7Z5J4 CCK-202ENST00000396169 1527 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
RAI1Q7Z5J4 ZHX3-212ENST00000558993 1528 ntTSL 5 BASIC15.98■□□□□ 0.15
RAI1Q7Z5J4 CNEP1R1-203ENST00000458059 2965 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
RAI1Q7Z5J4 TSPAN17-202ENST00000310032 2550 ntTSL 5 BASIC15.98■□□□□ 0.15
RAI1Q7Z5J4 SAMD11-213ENST00000618181 2179 ntAPPRIS ALT2 TSL 5 BASIC15.98■□□□□ 0.15
RAI1Q7Z5J4 BST1-201ENST00000265016 1480 ntAPPRIS P2 TSL 1 (best) BASIC15.98■□□□□ 0.15
RAI1Q7Z5J4 HCK-206ENST00000518730 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC15.98■□□□□ 0.15
RAI1Q7Z5J4 CD19-206ENST00000567541 1707 ntAPPRIS ALT2 TSL 1 (best) BASIC15.98■□□□□ 0.15
RAI1Q7Z5J4 ZNF843-203ENST00000618063 1765 ntAPPRIS P2 TSL 1 (best) BASIC15.98■□□□□ 0.15
RAI1Q7Z5J4 SDHA-201ENST00000264932 2390 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
RAI1Q7Z5J4 TCEAL2-201ENST00000329035 1080 ntAPPRIS P1 TSL 5 BASIC15.98■□□□□ 0.15
RAI1Q7Z5J4 DUSP15-203ENST00000375966 1077 ntTSL 3 BASIC15.98■□□□□ 0.15
RAI1Q7Z5J4 LENG8-AS1-201ENST00000416022 582 ntTSL 3 BASIC15.98■□□□□ 0.15
RAI1Q7Z5J4 KRT17P6-201ENST00000453795 1220 ntBASIC15.98■□□□□ 0.15
RAI1Q7Z5J4 FNDC5-205ENST00000496770 837 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
RAI1Q7Z5J4 ZNF436-AS1-206ENST00000518821 461 ntTSL 2 BASIC15.98■□□□□ 0.15
RAI1Q7Z5J4 LINC00092-202ENST00000580908 580 ntTSL 2 BASIC15.98■□□□□ 0.15
RAI1Q7Z5J4 SIGIRR-220ENST00000531205 1649 ntTSL 2 BASIC15.98■□□□□ 0.15
RAI1Q7Z5J4 PITX2-201ENST00000306732 2320 ntAPPRIS P4 TSL 1 (best) BASIC15.97■□□□□ 0.15
RAI1Q7Z5J4 PRRT1-202ENST00000375150 1726 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
RAI1Q7Z5J4 FER1L4-211ENST00000616283 1818 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
RAI1Q7Z5J4 SLC23A3-201ENST00000295738 2037 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
RAI1Q7Z5J4 CYP2D7-201ENST00000358097 1655 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
RAI1Q7Z5J4 CACNG5-202ENST00000533854 1311 ntAPPRIS P1 TSL 2 BASIC15.97■□□□□ 0.15
RAI1Q7Z5J4 LAD1-202ENST00000391967 2906 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
RAI1Q7Z5J4 KMT5B-203ENST00000401547 2666 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
RAI1Q7Z5J4 FAM3A-204ENST00000369643 1521 ntAPPRIS P1 TSL 2 BASIC15.97■□□□□ 0.15
RAI1Q7Z5J4 PPP1R3F-201ENST00000055335 3421 ntAPPRIS P1 TSL 2 BASIC15.97■□□□□ 0.15
RAI1Q7Z5J4 MEN1-208ENST00000394374 3155 ntAPPRIS P3 TSL 5 BASIC15.97■□□□□ 0.15
RAI1Q7Z5J4 SPAG16-204ENST00000413312 2258 ntTSL 5 BASIC15.97■□□□□ 0.15
RAI1Q7Z5J4 MPIG6B-205ENST00000375810 910 ntAPPRIS ALT2 TSL 1 (best) BASIC15.97■□□□□ 0.15
RAI1Q7Z5J4 MIR662-201ENST00000384847 95 ntBASIC15.97■□□□□ 0.15
RAI1Q7Z5J4 ITM2C-204ENST00000409704 1106 ntTSL 5 BASIC15.97■□□□□ 0.15
RAI1Q7Z5J4 UNC93B7-201ENST00000509439 705 ntBASIC15.97■□□□□ 0.15
RAI1Q7Z5J4 CCNG1-208ENST00000510664 994 ntTSL 5 BASIC15.97■□□□□ 0.15
RAI1Q7Z5J4 NAPSB-203ENST00000531692 561 ntTSL 2 BASIC15.97■□□□□ 0.15
RAI1Q7Z5J4 BMF-207ENST00000559701 630 ntTSL 3 BASIC15.97■□□□□ 0.15
RAI1Q7Z5J4 AC003688.1-201ENST00000577138 489 ntAPPRIS P1 TSL 3 BASIC15.97■□□□□ 0.15
RAI1Q7Z5J4 LIMD2-211ENST00000583211 1298 ntTSL 3 BASIC15.97■□□□□ 0.15
RAI1Q7Z5J4 CCDC74B-202ENST00000392984 1353 ntAPPRIS ALT2 TSL 5 BASIC15.97■□□□□ 0.15
RAI1Q7Z5J4 CYP2E1-205ENST00000463117 1912 ntAPPRIS P1 TSL 5 BASIC15.97■□□□□ 0.15
RAI1Q7Z5J4 CLINT1-207ENST00000523908 2346 ntAPPRIS ALT1 TSL 1 (best) BASIC15.97■□□□□ 0.15
RAI1Q7Z5J4 RAX-202ENST00000334889 3197 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
RAI1Q7Z5J4 GPR146-201ENST00000397095 1969 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
RAI1Q7Z5J4 SMPD3-203ENST00000563226 2093 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
RAI1Q7Z5J4 NEK2-205ENST00000540251 1318 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
RAI1Q7Z5J4 DMRT2-205ENST00000382255 2367 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
RAI1Q7Z5J4 MAFG-202ENST00000392366 1743 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
RAI1Q7Z5J4 AC008105.1-201ENST00000587534 2003 ntTSL 2 BASIC15.96■□□□□ 0.15
RAI1Q7Z5J4 MAFF-202ENST00000407965 2325 ntAPPRIS P1 TSL 2 BASIC15.96■□□□□ 0.15
RAI1Q7Z5J4 MOS-201ENST00000311923 1041 ntAPPRIS P1 BASIC15.96■□□□□ 0.15
RAI1Q7Z5J4 PARK7-201ENST00000338639 949 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
RAI1Q7Z5J4 CIB2-208ENST00000560618 804 ntTSL 2 BASIC15.96■□□□□ 0.15
RAI1Q7Z5J4 AP002414.4-201ENST00000589764 1148 ntBASIC15.96■□□□□ 0.15
RAI1Q7Z5J4 ZNF524-203ENST00000591046 1260 ntAPPRIS P1 BASIC15.96■□□□□ 0.15
RAI1Q7Z5J4 AL031008.1-201ENST00000619963 541 ntBASIC15.96■□□□□ 0.15
RAI1Q7Z5J4 SEPT9-236ENST00000591088 1691 ntAPPRIS ALT2 TSL 2 BASIC15.96■□□□□ 0.15
RAI1Q7Z5J4 STXBP2-202ENST00000414284 1859 ntAPPRIS ALT1 TSL 1 (best) BASIC15.96■□□□□ 0.15
RAI1Q7Z5J4 SDF4-201ENST00000263741 2079 ntAPPRIS P3 TSL 1 (best) BASIC15.96■□□□□ 0.15
RAI1Q7Z5J4 CPZ-202ENST00000360986 2267 ntAPPRIS ALT2 TSL 1 (best) BASIC15.96■□□□□ 0.15
RAI1Q7Z5J4 STMN3-201ENST00000370053 2255 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
RAI1Q7Z5J4 SGO1-209ENST00000442720 2266 ntAPPRIS ALT2 TSL 1 (best) BASIC15.96■□□□□ 0.15
RAI1Q7Z5J4 DMRT2-201ENST00000259622 2459 ntTSL 2 BASIC15.96■□□□□ 0.15
RAI1Q7Z5J4 LAPTM4B-204ENST00000619747 2758 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
RAI1Q7Z5J4 RELA-202ENST00000406246 2700 ntAPPRIS P3 TSL 1 (best) BASIC15.96■□□□□ 0.15
RAI1Q7Z5J4 VAV1-210ENST00000602142 2620 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
RAI1Q7Z5J4 KHDC1-202ENST00000370384 1430 ntAPPRIS ALT2 TSL 1 (best) BASIC15.96■□□□□ 0.15
RAI1Q7Z5J4 PDLIM3-212ENST00000620787 2352 ntTSL 4 BASIC15.96■□□□□ 0.15
RAI1Q7Z5J4 LAG3-201ENST00000203629 1974 ntAPPRIS P2 TSL 1 (best) BASIC15.96■□□□□ 0.15
RAI1Q7Z5J4 STARD3-219ENST00000580611 1989 ntTSL 5 BASIC15.96■□□□□ 0.15
RAI1Q7Z5J4 FP475955.4-201ENST00000623131 1990 ntBASIC15.96■□□□□ 0.15
RAI1Q7Z5J4 SNX19-209ENST00000530356 1562 ntTSL 2 BASIC15.96■□□□□ 0.14
RAI1Q7Z5J4 AC004870.1-201ENST00000315132 882 ntBASIC15.96■□□□□ 0.14
RAI1Q7Z5J4 DHRS4-203ENST00000397075 727 ntTSL 2 BASIC15.96■□□□□ 0.14
RAI1Q7Z5J4 TSSC2-201ENST00000450217 709 ntBASIC15.96■□□□□ 0.14
RAI1Q7Z5J4 DVL3-201ENST00000313143 5254 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Retrieved 100 of 98,524 protein–RNA pairs in 31.1 ms