Protein–RNA interactions for Protein: Q7Z3D4

LYSMD3, LysM and putative peptidoglycan-binding domain-containing protein 3, humanhuman

Predictions only

Length 306 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD3Q7Z3D4 SLC31A2-201ENST00000259392 1785 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
LYSMD3Q7Z3D4 KRT18P22-201ENST00000402024 1347 ntBASIC18.84■□□□□ 0.61
LYSMD3Q7Z3D4 FAM160A2-201ENST00000265978 3481 ntAPPRIS P3 TSL 1 (best) BASIC18.84■□□□□ 0.61
LYSMD3Q7Z3D4 CHCHD6-201ENST00000290913 1006 ntAPPRIS P2 TSL 1 (best) BASIC18.84■□□□□ 0.61
LYSMD3Q7Z3D4 ZNF584-202ENST00000322834 1042 ntTSL 2 BASIC18.84■□□□□ 0.61
LYSMD3Q7Z3D4 AL023284.2-201ENST00000405850 579 ntBASIC18.84■□□□□ 0.61
LYSMD3Q7Z3D4 PDCD6-206ENST00000507528 1088 ntAPPRIS ALT1 TSL 1 (best) BASIC18.84■□□□□ 0.61
LYSMD3Q7Z3D4 AC083906.6-201ENST00000641366 219 ntBASIC18.84■□□□□ 0.61
LYSMD3Q7Z3D4 FKRP-202ENST00000391909 2801 ntAPPRIS P1 TSL 2 BASIC18.84■□□□□ 0.61
LYSMD3Q7Z3D4 MB21D1-202ENST00000370318 1917 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
LYSMD3Q7Z3D4 AC005082.1-201ENST00000413042 2259 ntBASIC18.84■□□□□ 0.61
LYSMD3Q7Z3D4 EIF3B-202ENST00000397011 2966 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
LYSMD3Q7Z3D4 BTBD1-202ENST00000379403 1467 ntTSL 5 BASIC18.84■□□□□ 0.61
LYSMD3Q7Z3D4 GDPD1-201ENST00000284116 1821 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
LYSMD3Q7Z3D4 WDR90-201ENST00000293879 5488 ntAPPRIS P2 TSL 5 BASIC18.84■□□□□ 0.61
LYSMD3Q7Z3D4 GRB10-201ENST00000335866 5032 ntTSL 1 (best) BASIC18.83■□□□□ 0.61
LYSMD3Q7Z3D4 GSTZ1-204ENST00000393734 1424 ntTSL 5 BASIC18.83■□□□□ 0.61
LYSMD3Q7Z3D4 TMEM110-MUSTN1-202ENST00000504329 1405 ntAPPRIS P1 TSL 5 BASIC18.83■□□□□ 0.61
LYSMD3Q7Z3D4 MTSS1L-201ENST00000338779 4992 ntAPPRIS P2 TSL 1 (best) BASIC18.83■□□□□ 0.61
LYSMD3Q7Z3D4 TMEM129-202ENST00000382936 2810 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
LYSMD3Q7Z3D4 CACNA1I-204ENST00000407673 5952 ntAPPRIS ALT2 TSL 1 (best) BASIC18.83■□□□□ 0.61
LYSMD3Q7Z3D4 FADS2-209ENST00000521849 1703 ntTSL 1 (best) BASIC18.83■□□□□ 0.61
LYSMD3Q7Z3D4 SMN2-202ENST00000380742 1388 ntAPPRIS ALT2 TSL 5 BASIC18.83■□□□□ 0.61
LYSMD3Q7Z3D4 MLF2-202ENST00000435120 1379 ntAPPRIS P1 TSL 2 BASIC18.83■□□□□ 0.61
LYSMD3Q7Z3D4 RNF146-203ENST00000368314 2369 ntAPPRIS ALT1 TSL 2 BASIC18.83■□□□□ 0.61
LYSMD3Q7Z3D4 TNFRSF8-202ENST00000413146 2363 ntTSL 1 (best) BASIC18.83■□□□□ 0.61
LYSMD3Q7Z3D4 YY1AP1-213ENST00000405763 2011 ntAPPRIS ALT2 TSL 1 (best) BASIC18.83■□□□□ 0.61
LYSMD3Q7Z3D4 FBXL20-202ENST00000394294 2309 ntTSL 1 (best) BASIC18.83■□□□□ 0.61
LYSMD3Q7Z3D4 BIRC7-202ENST00000342412 1302 ntAPPRIS ALT2 TSL 1 (best) BASIC18.83■□□□□ 0.61
LYSMD3Q7Z3D4 KCTD15-202ENST00000430256 2555 ntAPPRIS P1 TSL 2 BASIC18.83■□□□□ 0.6
LYSMD3Q7Z3D4 AD000671.2-201ENST00000589807 1925 ntAPPRIS P1 TSL 2 BASIC18.83■□□□□ 0.6
LYSMD3Q7Z3D4 GLS-202ENST00000338435 4475 ntAPPRIS ALT1 TSL 1 (best) BASIC18.83■□□□□ 0.6
LYSMD3Q7Z3D4 RNF144A-AS1-204ENST00000437589 618 ntTSL 2 BASIC18.83■□□□□ 0.6
LYSMD3Q7Z3D4 AL451069.1-201ENST00000455414 634 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
LYSMD3Q7Z3D4 RPL29-202ENST00000466397 742 ntAPPRIS P1 TSL 2 BASIC18.83■□□□□ 0.6
LYSMD3Q7Z3D4 DUT-205ENST00000558813 769 ntTSL 2 BASIC18.83■□□□□ 0.6
LYSMD3Q7Z3D4 SLC39A11-207ENST00000579732 1004 ntTSL 2 BASIC18.83■□□□□ 0.6
LYSMD3Q7Z3D4 AC010653.2-201ENST00000623505 997 ntBASIC18.83■□□□□ 0.6
LYSMD3Q7Z3D4 AC068587.9-201ENST00000641814 219 ntBASIC18.83■□□□□ 0.6
LYSMD3Q7Z3D4 KRT81-202ENST00000615839 1505 ntAPPRIS ALT2 TSL 5 BASIC18.83■□□□□ 0.6
LYSMD3Q7Z3D4 AIPL1-209ENST00000575265 2111 ntAPPRIS ALT2 TSL 1 (best) BASIC18.83■□□□□ 0.6
LYSMD3Q7Z3D4 IKBKG-214ENST00000618670 2069 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
LYSMD3Q7Z3D4 GRK6-201ENST00000355472 2939 ntAPPRIS P3 TSL 1 (best) BASIC18.83■□□□□ 0.6
LYSMD3Q7Z3D4 EPHA10-202ENST00000373048 5425 ntAPPRIS P2 TSL 5 BASIC18.83■□□□□ 0.6
LYSMD3Q7Z3D4 KHDC1-202ENST00000370384 1430 ntAPPRIS ALT2 TSL 1 (best) BASIC18.83■□□□□ 0.6
LYSMD3Q7Z3D4 HACE1-202ENST00000369125 3102 ntTSL 2 BASIC18.83■□□□□ 0.6
LYSMD3Q7Z3D4 RBFOX1-204ENST00000422070 1684 ntTSL 2 BASIC18.82■□□□□ 0.6
LYSMD3Q7Z3D4 HEIH-201ENST00000623091 1652 ntBASIC18.82■□□□□ 0.6
LYSMD3Q7Z3D4 SNN-201ENST00000329565 3312 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
LYSMD3Q7Z3D4 PSPC1-201ENST00000338910 2407 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
LYSMD3Q7Z3D4 UNG-202ENST00000336865 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
LYSMD3Q7Z3D4 UQCRQ-201ENST00000378665 586 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
LYSMD3Q7Z3D4 AC073343.2-202ENST00000430844 532 ntTSL 4 BASIC18.82■□□□□ 0.6
LYSMD3Q7Z3D4 CRNDE-210ENST00000560912 459 ntTSL 5 BASIC18.82■□□□□ 0.6
LYSMD3Q7Z3D4 SUSD3-205ENST00000617293 1076 ntAPPRIS ALT2 TSL 3 BASIC18.82■□□□□ 0.6
LYSMD3Q7Z3D4 ADORA1-208ENST00000618295 862 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
LYSMD3Q7Z3D4 AL513523.10-201ENST00000623024 1186 ntAPPRIS P1 TSL 5 BASIC18.82■□□□□ 0.6
LYSMD3Q7Z3D4 AC008735.6-201ENST00000635964 1292 ntAPPRIS P1 TSL 2 BASIC18.82■□□□□ 0.6
LYSMD3Q7Z3D4 CLN6-221ENST00000637494 765 ntTSL 5 BASIC18.82■□□□□ 0.6
LYSMD3Q7Z3D4 MIB2-203ENST00000378712 2890 ntTSL 2 BASIC18.82■□□□□ 0.6
LYSMD3Q7Z3D4 LINC02028-204ENST00000449350 1419 ntTSL 3 BASIC18.82■□□□□ 0.6
LYSMD3Q7Z3D4 TCTN1-223ENST00000550703 2149 ntTSL 2 BASIC18.82■□□□□ 0.6
LYSMD3Q7Z3D4 LINC00315-201ENST00000441947 2323 ntTSL 5 BASIC18.82■□□□□ 0.6
LYSMD3Q7Z3D4 PNMA8B-202ENST00000599531 5308 ntAPPRIS P1 BASIC18.81■□□□□ 0.6
LYSMD3Q7Z3D4 LONP1-201ENST00000360614 3236 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
LYSMD3Q7Z3D4 GHDC-212ENST00000593209 1827 ntTSL 5 BASIC18.81■□□□□ 0.6
LYSMD3Q7Z3D4 DYNC1LI2-201ENST00000258198 4515 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
LYSMD3Q7Z3D4 PHKG2-202ENST00000424889 1566 ntTSL 2 BASIC18.81■□□□□ 0.6
LYSMD3Q7Z3D4 ORAI2-204ENST00000473939 2493 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
LYSMD3Q7Z3D4 FAM198A-202ENST00000430121 3121 ntAPPRIS P2 TSL 5 BASIC18.81■□□□□ 0.6
LYSMD3Q7Z3D4 RAPH1-211ENST00000457812 2673 ntAPPRIS ALT2 TSL 2 BASIC18.81■□□□□ 0.6
LYSMD3Q7Z3D4 TMEM104-202ENST00000417024 1781 ntTSL 2 BASIC18.81■□□□□ 0.6
LYSMD3Q7Z3D4 SLC35A3-224ENST00000640732 1777 ntTSL 5 BASIC18.81■□□□□ 0.6
LYSMD3Q7Z3D4 TWF1-201ENST00000395510 3045 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
LYSMD3Q7Z3D4 GGT2-201ENST00000401924 2366 ntAPPRIS P1 TSL 5 BASIC18.81■□□□□ 0.6
LYSMD3Q7Z3D4 TTLL3-209ENST00000426895 2767 ntAPPRIS P2 TSL 2 BASIC18.81■□□□□ 0.6
LYSMD3Q7Z3D4 NPM3-201ENST00000370110 877 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
LYSMD3Q7Z3D4 MIR1224-201ENST00000408193 85 ntBASIC18.81■□□□□ 0.6
LYSMD3Q7Z3D4 KCTD7-202ENST00000443322 1160 ntAPPRIS ALT1 TSL 1 (best) BASIC18.81■□□□□ 0.6
LYSMD3Q7Z3D4 MCCD1P1-208ENST00000445732 328 ntBASIC18.81■□□□□ 0.6
LYSMD3Q7Z3D4 SEPHS1-206ENST00000545675 2988 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
LYSMD3Q7Z3D4 AL929554.1-201ENST00000568665 460 ntAPPRIS P1 TSL 3 BASIC18.81■□□□□ 0.6
LYSMD3Q7Z3D4 AC010531.1-201ENST00000568879 953 ntAPPRIS P1 TSL 4 BASIC18.81■□□□□ 0.6
LYSMD3Q7Z3D4 MRPL3-202ENST00000425847 1457 ntTSL 2 BASIC18.81■□□□□ 0.6
LYSMD3Q7Z3D4 MATN4-201ENST00000353917 1657 ntTSL 5 BASIC18.81■□□□□ 0.6
LYSMD3Q7Z3D4 IRF5-202ENST00000357234 1680 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
LYSMD3Q7Z3D4 AHCYL1-203ENST00000393614 4313 ntTSL 2 BASIC18.81■□□□□ 0.6
LYSMD3Q7Z3D4 SPATA6L-207ENST00000475086 1444 ntAPPRIS P1 TSL 2 BASIC18.81■□□□□ 0.6
LYSMD3Q7Z3D4 PPHLN1-213ENST00000549190 1777 ntTSL 5 BASIC18.81■□□□□ 0.6
LYSMD3Q7Z3D4 ATP5L-201ENST00000300688 1577 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
LYSMD3Q7Z3D4 ATP6V1G2-205ENST00000303892 1588 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
LYSMD3Q7Z3D4 SUDS3-204ENST00000543473 4897 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
LYSMD3Q7Z3D4 KIF1BP-201ENST00000361983 2544 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
LYSMD3Q7Z3D4 AC069544.2-201ENST00000640019 2528 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
LYSMD3Q7Z3D4 ZNF419-205ENST00000424930 2323 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
LYSMD3Q7Z3D4 ILK-203ENST00000420936 1692 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
LYSMD3Q7Z3D4 TRIP4-201ENST00000261884 2045 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
LYSMD3Q7Z3D4 AC008556.1-201ENST00000610908 2040 ntBASIC18.8■□□□□ 0.6
LYSMD3Q7Z3D4 CNIH3-201ENST00000272133 2558 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
LYSMD3Q7Z3D4 ARAP1-AS2-201ENST00000500163 1824 ntTSL 2 BASIC18.8■□□□□ 0.6
Retrieved 100 of 98,524 protein–RNA pairs in 31.4 ms