Protein–RNA interactions for Protein: Q6ZUS6

CCDC149, Coiled-coil domain-containing protein 149, humanhuman

Predictions only

Length 474 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC149Q6ZUS6 GMPPA-203ENST00000358215 1823 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
CCDC149Q6ZUS6 KLHL14-201ENST00000358095 1884 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
CCDC149Q6ZUS6 PTPRN2-204ENST00000404321 1374 ntTSL 5 BASIC19.69■□□□□ 0.74
CCDC149Q6ZUS6 RDH13-203ENST00000415061 1871 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
CCDC149Q6ZUS6 RBM26-202ENST00000438724 5152 ntAPPRIS ALT1 TSL 1 (best) BASIC19.69■□□□□ 0.74
CCDC149Q6ZUS6 FKBP3-201ENST00000216330 1684 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
CCDC149Q6ZUS6 ISYNA1-206ENST00000578963 1691 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
CCDC149Q6ZUS6 MRFAP1-201ENST00000320912 2049 ntAPPRIS P1 TSL 2 BASIC19.68■□□□□ 0.74
CCDC149Q6ZUS6 SEMA3B-202ENST00000418576 1765 ntTSL 2 BASIC19.68■□□□□ 0.74
CCDC149Q6ZUS6 RNF38-202ENST00000350199 5104 ntAPPRIS P1 TSL 5 BASIC19.68■□□□□ 0.74
CCDC149Q6ZUS6 GPT-205ENST00000528431 1822 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
CCDC149Q6ZUS6 MIR662-201ENST00000384847 95 ntBASIC19.68■□□□□ 0.74
CCDC149Q6ZUS6 SDR39U1-201ENST00000399395 1233 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
CCDC149Q6ZUS6 ING5-202ENST00000406941 946 ntAPPRIS ALT1 TSL 1 (best) BASIC19.68■□□□□ 0.74
CCDC149Q6ZUS6 UBE2F-205ENST00000414443 2100 ntTSL 2 BASIC19.68■□□□□ 0.74
CCDC149Q6ZUS6 AP000347.1-202ENST00000435868 847 ntBASIC19.68■□□□□ 0.74
CCDC149Q6ZUS6 DLGAP4-201ENST00000339266 5016 ntAPPRIS ALT2 TSL 5 BASIC19.68■□□□□ 0.74
CCDC149Q6ZUS6 PDE9A-206ENST00000380328 1875 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
CCDC149Q6ZUS6 SHBG-201ENST00000340624 1311 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
CCDC149Q6ZUS6 TMEM189-201ENST00000371650 2222 ntAPPRIS ALT1 TSL 1 (best) BASIC19.68■□□□□ 0.74
CCDC149Q6ZUS6 PLD6-201ENST00000321560 2560 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
CCDC149Q6ZUS6 DNAJB5-203ENST00000453597 2589 ntTSL 2 BASIC19.68■□□□□ 0.74
CCDC149Q6ZUS6 NGEF-202ENST00000373552 2286 ntAPPRIS P1 TSL 2 BASIC19.68■□□□□ 0.74
CCDC149Q6ZUS6 BYSL-201ENST00000230340 2029 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
CCDC149Q6ZUS6 CD19-206ENST00000567541 1707 ntAPPRIS ALT2 TSL 1 (best) BASIC19.68■□□□□ 0.74
CCDC149Q6ZUS6 ACD-214ENST00000620338 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC19.67■□□□□ 0.74
CCDC149Q6ZUS6 ZDHHC5-201ENST00000287169 4666 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
CCDC149Q6ZUS6 AP5S1-202ENST00000379567 1791 ntAPPRIS P1 TSL 2 BASIC19.67■□□□□ 0.74
CCDC149Q6ZUS6 COMT-202ENST00000361682 2437 ntAPPRIS P3 TSL 1 (best) BASIC19.67■□□□□ 0.74
CCDC149Q6ZUS6 GLS-201ENST00000320717 4834 ntAPPRIS P3 TSL 1 (best) BASIC19.67■□□□□ 0.74
CCDC149Q6ZUS6 RAB5A-201ENST00000273047 2536 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
CCDC149Q6ZUS6 MYOG-201ENST00000241651 1528 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
CCDC149Q6ZUS6 LRRC23-201ENST00000007969 1615 ntAPPRIS P4 TSL 1 (best) BASIC19.67■□□□□ 0.74
CCDC149Q6ZUS6 CNPY2-201ENST00000273308 1214 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
CCDC149Q6ZUS6 PSMA7-203ENST00000370873 996 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
CCDC149Q6ZUS6 MIR564-202ENST00000385049 94 ntBASIC19.67■□□□□ 0.74
CCDC149Q6ZUS6 ELP6-205ENST00000439305 880 ntTSL 2 BASIC19.67■□□□□ 0.74
CCDC149Q6ZUS6 ARSK-202ENST00000504763 1088 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
CCDC149Q6ZUS6 ZNF706-206ENST00000519744 785 ntTSL 3 BASIC19.67■□□□□ 0.74
CCDC149Q6ZUS6 AC079031.1-201ENST00000542627 1035 ntTSL 3 BASIC19.67■□□□□ 0.74
CCDC149Q6ZUS6 TBCB-205ENST00000585746 875 ntTSL 3 BASIC19.67■□□□□ 0.74
CCDC149Q6ZUS6 SMIM22-203ENST00000588500 525 ntAPPRIS ALT2 TSL 1 (best) BASIC19.67■□□□□ 0.74
CCDC149Q6ZUS6 KISS1R-203ENST00000606939 964 ntTSL 5 BASIC19.67■□□□□ 0.74
CCDC149Q6ZUS6 AC010240.3-201ENST00000607688 395 ntBASIC19.67■□□□□ 0.74
CCDC149Q6ZUS6 TMPRSS6-207ENST00000442782 1695 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
CCDC149Q6ZUS6 LINC01123-202ENST00000419296 2436 ntTSL 2 BASIC19.67■□□□□ 0.74
CCDC149Q6ZUS6 ENTPD8-204ENST00000472938 1749 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
CCDC149Q6ZUS6 AC006001.3-204ENST00000638711 2103 ntTSL 5 BASIC19.67■□□□□ 0.74
CCDC149Q6ZUS6 KCNC2-204ENST00000540018 2168 ntAPPRIS ALT2 TSL 2 BASIC19.67■□□□□ 0.74
CCDC149Q6ZUS6 RASL12-201ENST00000220062 2640 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
CCDC149Q6ZUS6 CXCL16-201ENST00000293778 2222 ntAPPRIS P2 TSL 1 (best) BASIC19.67■□□□□ 0.74
CCDC149Q6ZUS6 BTD-202ENST00000383778 2261 ntAPPRIS ALT2 TSL 2 BASIC19.67■□□□□ 0.74
CCDC149Q6ZUS6 ZFC3H1-211ENST00000552037 1484 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
CCDC149Q6ZUS6 RDX-202ENST00000405097 2761 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
CCDC149Q6ZUS6 APBB1IP-201ENST00000356785 1513 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
CCDC149Q6ZUS6 GCOM1-201ENST00000380568 1516 ntAPPRIS ALT2 TSL 2 BASIC19.66■□□□□ 0.74
CCDC149Q6ZUS6 STEAP1B-201ENST00000404369 1515 ntAPPRIS ALT2 TSL 1 (best) BASIC19.66■□□□□ 0.74
CCDC149Q6ZUS6 MRAS-204ENST00000464896 1534 ntTSL 2 BASIC19.66■□□□□ 0.74
CCDC149Q6ZUS6 SCD5-201ENST00000273908 1995 ntTSL 2 BASIC19.66■□□□□ 0.74
CCDC149Q6ZUS6 ADGRA3-204ENST00000502482 2870 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
CCDC149Q6ZUS6 EEF1A2-201ENST00000217182 2006 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
CCDC149Q6ZUS6 SPATS2L-204ENST00000409140 2463 ntAPPRIS P1 TSL 2 BASIC19.66■□□□□ 0.74
CCDC149Q6ZUS6 HGFAC-204ENST00000511533 2016 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
CCDC149Q6ZUS6 CDK4-202ENST00000312990 1650 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
CCDC149Q6ZUS6 ETV7-202ENST00000340181 1719 ntAPPRIS P3 TSL 1 (best) BASIC19.66■□□□□ 0.74
CCDC149Q6ZUS6 ZNF48-201ENST00000320159 3234 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
CCDC149Q6ZUS6 PFN2-203ENST00000452853 1780 ntAPPRIS ALT1 TSL 1 (best) BASIC19.66■□□□□ 0.74
CCDC149Q6ZUS6 TRAPPC3-202ENST00000373162 1056 ntTSL 2 BASIC19.66■□□□□ 0.74
CCDC149Q6ZUS6 DUSP15-203ENST00000375966 1077 ntTSL 3 BASIC19.66■□□□□ 0.74
CCDC149Q6ZUS6 CORT-201ENST00000377049 1130 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
CCDC149Q6ZUS6 GGT1-204ENST00000401885 968 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
CCDC149Q6ZUS6 TSPY22P-201ENST00000427496 604 ntBASIC19.66■□□□□ 0.74
CCDC149Q6ZUS6 ENO1-AS1-201ENST00000442636 456 ntTSL 2 BASIC19.66■□□□□ 0.74
CCDC149Q6ZUS6 PHGR1-201ENST00000448599 436 ntAPPRIS P1 TSL 5 BASIC19.66■□□□□ 0.74
CCDC149Q6ZUS6 AK2-210ENST00000548033 936 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
CCDC149Q6ZUS6 AC009084.1-201ENST00000566869 317 ntTSL 5 BASIC19.66■□□□□ 0.74
CCDC149Q6ZUS6 LINC01711-201ENST00000598340 967 ntBASIC19.66■□□□□ 0.74
CCDC149Q6ZUS6 DUSP7-202ENST00000495880 3340 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
CCDC149Q6ZUS6 ARFGAP3-201ENST00000263245 2857 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
CCDC149Q6ZUS6 JPH2-201ENST00000342272 1923 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
CCDC149Q6ZUS6 FGFR2-211ENST00000369059 3003 ntTSL 5 BASIC19.66■□□□□ 0.74
CCDC149Q6ZUS6 TEX13A-201ENST00000600991 1377 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
CCDC149Q6ZUS6 SLC3A2-202ENST00000377889 1993 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
CCDC149Q6ZUS6 PLSCR3-212ENST00000576201 1965 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
CCDC149Q6ZUS6 PTX4-201ENST00000293922 1422 ntAPPRIS P2 TSL 1 (best) BASIC19.66■□□□□ 0.74
CCDC149Q6ZUS6 LAT-204ENST00000395461 1448 ntAPPRIS ALT2 TSL 1 (best) BASIC19.66■□□□□ 0.74
CCDC149Q6ZUS6 MTMR9LP-204ENST00000441044 2624 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
CCDC149Q6ZUS6 KRT8P32-201ENST00000512863 1461 ntBASIC19.66■□□□□ 0.74
CCDC149Q6ZUS6 AC026362.1-201ENST00000540866 5618 ntTSL 2 BASIC19.66■□□□□ 0.74
CCDC149Q6ZUS6 ASB16-201ENST00000293414 2139 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
CCDC149Q6ZUS6 HDAC1-201ENST00000373548 2124 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
CCDC149Q6ZUS6 USF2-202ENST00000343550 1523 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
CCDC149Q6ZUS6 KLRG2-201ENST00000340940 2197 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
CCDC149Q6ZUS6 SPG7-202ENST00000341316 2288 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
CCDC149Q6ZUS6 UBQLN4P1-201ENST00000461599 1801 ntBASIC19.65■□□□□ 0.74
CCDC149Q6ZUS6 LPAR1-201ENST00000358883 2687 ntAPPRIS P2 TSL 2 BASIC19.65■□□□□ 0.74
CCDC149Q6ZUS6 SLC25A3-201ENST00000188376 1909 ntAPPRIS ALT1 TSL 1 (best) BASIC19.65■□□□□ 0.74
CCDC149Q6ZUS6 GJC3-201ENST00000312891 1116 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
CCDC149Q6ZUS6 TMEM150B-201ENST00000326652 943 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
CCDC149Q6ZUS6 GNG5-202ENST00000370645 790 ntAPPRIS P1 TSL 2 BASIC19.65■□□□□ 0.74
Retrieved 100 of 98,524 protein–RNA pairs in 34 ms