Protein–RNA interactions for Protein: Q6VY07

PACS1, Phosphofurin acidic cluster sorting protein 1, humanhuman

Predictions only

Length 963 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PACS1Q6VY07 DENND2A-201ENST00000275884 3735 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
PACS1Q6VY07 ACAP3-202ENST00000354700 3896 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
PACS1Q6VY07 KCNQ2-205ENST00000360480 2775 ntAPPRIS ALT2 TSL 5 BASIC18.96■□□□□ 0.63
PACS1Q6VY07 IL17RC-215ENST00000455057 2244 ntAPPRIS ALT2 TSL 1 (best) BASIC18.96■□□□□ 0.63
PACS1Q6VY07 USP48-204ENST00000400301 4309 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
PACS1Q6VY07 ZNF274-203ENST00000424679 2539 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
PACS1Q6VY07 FAM3A-201ENST00000322269 1815 ntTSL 5 BASIC18.96■□□□□ 0.63
PACS1Q6VY07 LCE2B-201ENST00000368780 612 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
PACS1Q6VY07 MIR718-201ENST00000390190 70 ntBASIC18.96■□□□□ 0.63
PACS1Q6VY07 POLR2J-202ENST00000393794 784 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
PACS1Q6VY07 FAM197Y1-201ENST00000421178 764 ntBASIC18.96■□□□□ 0.63
PACS1Q6VY07 AP000697.1-201ENST00000430607 339 ntTSL 5 BASIC18.96■□□□□ 0.63
PACS1Q6VY07 NDUFB2-203ENST00000461457 559 ntTSL 3 BASIC18.96■□□□□ 0.63
PACS1Q6VY07 CHAC1-203ENST00000487220 853 ntTSL 3 BASIC18.96■□□□□ 0.63
PACS1Q6VY07 AF131216.3-201ENST00000525867 1099 ntTSL 2 BASIC18.96■□□□□ 0.63
PACS1Q6VY07 ANAPC11-207ENST00000572639 578 ntAPPRIS P1 TSL 3 BASIC18.96■□□□□ 0.63
PACS1Q6VY07 AP006294.2-201ENST00000641667 209 ntBASIC18.96■□□□□ 0.63
PACS1Q6VY07 WISP2-201ENST00000190983 1403 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
PACS1Q6VY07 NFATC2IP-201ENST00000320805 4569 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
PACS1Q6VY07 BAG3-201ENST00000369085 2571 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
PACS1Q6VY07 AL138752.2-201ENST00000540557 2591 ntAPPRIS P1 TSL 5 BASIC18.96■□□□□ 0.63
PACS1Q6VY07 CYP46A1-202ENST00000380228 1597 ntTSL 2 BASIC18.96■□□□□ 0.63
PACS1Q6VY07 ISL2-201ENST00000290759 1881 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
PACS1Q6VY07 PTGER3-201ENST00000306666 2333 ntAPPRIS ALT2 TSL 1 (best) BASIC18.96■□□□□ 0.63
PACS1Q6VY07 ZNF205-206ENST00000620094 2309 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
PACS1Q6VY07 ANKRD10-201ENST00000267339 2495 ntAPPRIS P1 TSL 2 BASIC18.96■□□□□ 0.63
PACS1Q6VY07 LRP3-201ENST00000253193 3807 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
PACS1Q6VY07 TXNL1-211ENST00000590954 1339 ntAPPRIS P1 TSL 2 BASIC18.96■□□□□ 0.63
PACS1Q6VY07 PCSK7-201ENST00000320934 4649 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
PACS1Q6VY07 CABIN1-202ENST00000337989 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC18.95■□□□□ 0.62
PACS1Q6VY07 CPZ-201ENST00000315782 2136 ntAPPRIS P3 TSL 1 (best) BASIC18.95■□□□□ 0.62
PACS1Q6VY07 RRN3-205ENST00000563559 2128 ntTSL 5 BASIC18.95■□□□□ 0.62
PACS1Q6VY07 MATN4-201ENST00000353917 1657 ntTSL 5 BASIC18.95■□□□□ 0.62
PACS1Q6VY07 GPRIN2-201ENST00000374314 1696 ntAPPRIS P1 BASIC18.95■□□□□ 0.62
PACS1Q6VY07 ACTR3B-203ENST00000397282 1692 ntTSL 2 BASIC18.95■□□□□ 0.62
PACS1Q6VY07 TMPRSS5-209ENST00000544634 1524 ntTSL 2 BASIC18.95■□□□□ 0.62
PACS1Q6VY07 ZNF696-201ENST00000330143 2795 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
PACS1Q6VY07 STRADB-202ENST00000392249 2190 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
PACS1Q6VY07 SIKE1-201ENST00000060969 2190 ntAPPRIS P3 TSL 1 (best) BASIC18.95■□□□□ 0.62
PACS1Q6VY07 ITPK1-202ENST00000354313 2803 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
PACS1Q6VY07 PJA1-202ENST00000374571 2672 ntAPPRIS ALT2 TSL 1 (best) BASIC18.95■□□□□ 0.62
PACS1Q6VY07 ANKS3-230ENST00000614075 2387 ntAPPRIS P1 TSL 5 BASIC18.95■□□□□ 0.62
PACS1Q6VY07 CXCL3-201ENST00000296026 1075 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
PACS1Q6VY07 RXFP4-201ENST00000368318 1240 ntAPPRIS P1 BASIC18.95■□□□□ 0.62
PACS1Q6VY07 NKAIN4-201ENST00000370307 793 ntTSL 5 BASIC18.95■□□□□ 0.62
PACS1Q6VY07 TCEAL6-202ENST00000372774 1106 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
PACS1Q6VY07 CDKN1B-202ENST00000396340 897 ntTSL 3 BASIC18.95■□□□□ 0.62
PACS1Q6VY07 AC004951.3-201ENST00000418645 1148 ntBASIC18.95■□□□□ 0.62
PACS1Q6VY07 KHDRBS1-204ENST00000492989 1215 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
PACS1Q6VY07 REXO2-216ENST00000544196 452 ntTSL 3 BASIC18.95■□□□□ 0.62
PACS1Q6VY07 EIF3J-AS1-205ENST00000560750 1093 ntTSL 3 BASIC18.95■□□□□ 0.62
PACS1Q6VY07 AC016582.3-201ENST00000589653 561 ntTSL 4 BASIC18.95■□□□□ 0.62
PACS1Q6VY07 SOCS3-201ENST00000330871 2734 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
PACS1Q6VY07 VMAC-201ENST00000339485 2254 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
PACS1Q6VY07 LEFTY2-201ENST00000366820 2287 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
PACS1Q6VY07 SORCS3-201ENST00000369699 5530 ntAPPRIS P1 TSL 5 BASIC18.95■□□□□ 0.62
PACS1Q6VY07 TMEM25-203ENST00000354284 1456 ntTSL 2 BASIC18.95■□□□□ 0.62
PACS1Q6VY07 DDRGK1-201ENST00000354488 1306 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
PACS1Q6VY07 GTF2H4-202ENST00000376316 1673 ntAPPRIS P1 TSL 5 BASIC18.95■□□□□ 0.62
PACS1Q6VY07 LRP1-204ENST00000553277 1693 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
PACS1Q6VY07 FUCA1-201ENST00000374479 2047 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
PACS1Q6VY07 CASD1-201ENST00000297273 3942 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
PACS1Q6VY07 KIF16B-206ENST00000636835 5109 ntAPPRIS ALT2 TSL 1 (best) BASIC18.94■□□□□ 0.62
PACS1Q6VY07 TAL1-202ENST00000371884 4642 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
PACS1Q6VY07 SNAI3-AS1-205ENST00000568633 2096 ntBASIC18.94■□□□□ 0.62
PACS1Q6VY07 CNTNAP3B-203ENST00000377561 5379 ntAPPRIS P2 TSL 1 (best) BASIC18.94■□□□□ 0.62
PACS1Q6VY07 SERGEF-201ENST00000265965 1566 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
PACS1Q6VY07 AC138932.1-201ENST00000534164 6830 ntBASIC18.94■□□□□ 0.62
PACS1Q6VY07 NECAB1-201ENST00000417640 5289 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
PACS1Q6VY07 PTGER3-209ENST00000460330 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC18.94■□□□□ 0.62
PACS1Q6VY07 PKMYT1-203ENST00000431515 2308 ntTSL 2 BASIC18.94■□□□□ 0.62
PACS1Q6VY07 ABHD14B-202ENST00000361143 1636 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
PACS1Q6VY07 METTL21A-201ENST00000272839 1210 ntTSL 5 BASIC18.94■□□□□ 0.62
PACS1Q6VY07 RAC3-201ENST00000306897 1090 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
PACS1Q6VY07 LIME1-201ENST00000309546 1178 ntAPPRIS P3 TSL 1 (best) BASIC18.94■□□□□ 0.62
PACS1Q6VY07 IGHV3-73-201ENST00000390636 437 ntAPPRIS P1 BASIC18.94■□□□□ 0.62
PACS1Q6VY07 LINC01122-201ENST00000422723 675 ntTSL 3 BASIC18.94■□□□□ 0.62
PACS1Q6VY07 ADGRD1-AS1-202ENST00000542980 1277 ntTSL 4 BASIC18.94■□□□□ 0.62
PACS1Q6VY07 CBLN3-202ENST00000555436 718 ntTSL 3 BASIC18.94■□□□□ 0.62
PACS1Q6VY07 AC044860.1-201ENST00000560756 1160 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
PACS1Q6VY07 HSDL1-202ENST00000434463 1493 ntTSL 2 BASIC18.94■□□□□ 0.62
PACS1Q6VY07 HOXA9-201ENST00000343483 2060 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
PACS1Q6VY07 ZHX3-212ENST00000558993 1528 ntTSL 5 BASIC18.94■□□□□ 0.62
PACS1Q6VY07 ZNRF3-203ENST00000544604 6851 ntAPPRIS ALT2 TSL 1 (best) BASIC18.94■□□□□ 0.62
PACS1Q6VY07 PRDM14-201ENST00000276594 2344 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
PACS1Q6VY07 SLC37A2-203ENST00000403796 2910 ntAPPRIS ALT1 TSL 2 BASIC18.94■□□□□ 0.62
PACS1Q6VY07 UBE2E3-209ENST00000602710 1556 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
PACS1Q6VY07 GAREM2-201ENST00000401533 4161 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
PACS1Q6VY07 MMD2-202ENST00000404774 2415 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
PACS1Q6VY07 AL031658.1-201ENST00000449519 2013 ntTSL 2 BASIC18.93■□□□□ 0.62
PACS1Q6VY07 FAM219B-204ENST00000563119 2721 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
PACS1Q6VY07 BPIFB3-201ENST00000375494 1454 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
PACS1Q6VY07 GAMT-201ENST00000252288 1121 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
PACS1Q6VY07 POMC-202ENST00000380794 1295 ntAPPRIS P1 TSL 2 BASIC18.93■□□□□ 0.62
PACS1Q6VY07 CTNNBIP1-204ENST00000400904 1206 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
PACS1Q6VY07 RAMP1-204ENST00000409726 734 ntTSL 3 BASIC18.93■□□□□ 0.62
PACS1Q6VY07 DERL1-203ENST00000419562 918 ntTSL 2 BASIC18.93■□□□□ 0.62
PACS1Q6VY07 AL359747.1-201ENST00000442370 536 ntTSL 2 BASIC18.93■□□□□ 0.62
PACS1Q6VY07 B3GAT3P1-201ENST00000471720 806 ntBASIC18.93■□□□□ 0.62
PACS1Q6VY07 NUDT16P1-203ENST00000513809 620 ntBASIC18.93■□□□□ 0.62
Retrieved 100 of 98,524 protein–RNA pairs in 22.9 ms