Protein–RNA interactions for Protein: Q6P499

NIPAL3, NIPA-like protein 3, humanhuman

Predictions only

Length 406 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NIPAL3Q6P499 CD177P1-201ENST00000606252 935 ntBASIC17.09■□□□□ 0.33
NIPAL3Q6P499 ULK2-201ENST00000361658 3908 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
NIPAL3Q6P499 HSDL1-202ENST00000434463 1493 ntTSL 2 BASIC17.09■□□□□ 0.33
NIPAL3Q6P499 KRT16-201ENST00000301653 1644 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
NIPAL3Q6P499 ZNF787-202ENST00000587279 1657 ntTSL 2 BASIC17.09■□□□□ 0.33
NIPAL3Q6P499 PRELID3A-201ENST00000336990 1715 ntAPPRIS P1 TSL 2 BASIC17.09■□□□□ 0.33
NIPAL3Q6P499 KTI12-201ENST00000371614 1714 ntAPPRIS P1 BASIC17.09■□□□□ 0.33
NIPAL3Q6P499 PRELID3A-202ENST00000440960 1716 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
NIPAL3Q6P499 NF2-203ENST00000353887 1845 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
NIPAL3Q6P499 TMPRSS5-205ENST00000538955 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
NIPAL3Q6P499 PPP2R2B-203ENST00000394411 2071 ntAPPRIS P1 TSL 2 BASIC17.09■□□□□ 0.33
NIPAL3Q6P499 AC107464.1-203ENST00000468356 2120 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
NIPAL3Q6P499 ASB7-203ENST00000558747 2133 ntTSL 5 BASIC17.09■□□□□ 0.33
NIPAL3Q6P499 CHRAC1-201ENST00000220913 2488 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
NIPAL3Q6P499 ZNF274-203ENST00000424679 2539 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
NIPAL3Q6P499 URI1-202ENST00000392271 3444 ntAPPRIS P3 TSL 1 (best) BASIC17.09■□□□□ 0.33
NIPAL3Q6P499 TP53BP2-201ENST00000343537 4651 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
NIPAL3Q6P499 BAG5-201ENST00000299204 4848 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
NIPAL3Q6P499 FRRS1L-201ENST00000561981 8197 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
NIPAL3Q6P499 FLYWCH1-201ENST00000253928 5037 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.33
NIPAL3Q6P499 CASD1-201ENST00000297273 3942 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
NIPAL3Q6P499 KANSL1L-203ENST00000418791 3562 ntTSL 1 (best) BASIC17.08■□□□□ 0.33
NIPAL3Q6P499 AC018470.1-201ENST00000624790 3129 ntBASIC17.08■□□□□ 0.33
NIPAL3Q6P499 GTPBP2-202ENST00000307126 2933 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
NIPAL3Q6P499 ZNF696-201ENST00000330143 2795 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
NIPAL3Q6P499 ZNF74-203ENST00000403682 2789 ntTSL 1 (best) BASIC17.08■□□□□ 0.33
NIPAL3Q6P499 IFFO1-204ENST00000396840 2677 ntAPPRIS ALT1 TSL 5 BASIC17.08■□□□□ 0.33
NIPAL3Q6P499 OCSTAMP-201ENST00000279028 2043 ntAPPRIS P1 TSL 5 BASIC17.08■□□□□ 0.33
NIPAL3Q6P499 SPAG1-206ENST00000520643 1723 ntTSL 2 BASIC17.08■□□□□ 0.32
NIPAL3Q6P499 FADS2-209ENST00000521849 1703 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
NIPAL3Q6P499 PCGF3-208ENST00000470161 1652 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
NIPAL3Q6P499 CD151-201ENST00000322008 1548 ntAPPRIS P2 TSL 1 (best) BASIC17.08■□□□□ 0.32
NIPAL3Q6P499 TXNL1-211ENST00000590954 1339 ntAPPRIS P1 TSL 2 BASIC17.08■□□□□ 0.32
NIPAL3Q6P499 ANKRD10-202ENST00000310847 1193 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
NIPAL3Q6P499 LCE2B-201ENST00000368780 612 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
NIPAL3Q6P499 VKORC1-204ENST00000394971 664 ntTSL 5 BASIC17.08■□□□□ 0.32
NIPAL3Q6P499 AC092718.1-201ENST00000501068 1088 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
NIPAL3Q6P499 DET1-205ENST00000558413 583 ntTSL 4 BASIC17.08■□□□□ 0.32
NIPAL3Q6P499 ISG20-210ENST00000560741 800 ntAPPRIS P1 TSL 5 BASIC17.08■□□□□ 0.32
NIPAL3Q6P499 AL049637.2-201ENST00000641778 930 ntBASIC17.08■□□□□ 0.32
NIPAL3Q6P499 AL031985.4-201ENST00000642138 673 ntBASIC17.08■□□□□ 0.32
NIPAL3Q6P499 LGI3-201ENST00000306317 3272 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
NIPAL3Q6P499 HNRNPM-201ENST00000325495 2494 ntAPPRIS P4 TSL 1 (best) BASIC17.08■□□□□ 0.32
NIPAL3Q6P499 AR-207ENST00000612010 3896 ntTSL 5 BASIC17.08■□□□□ 0.32
NIPAL3Q6P499 TUBA4A-201ENST00000248437 2162 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
NIPAL3Q6P499 AC138028.1-201ENST00000333666 2137 ntTSL 2 BASIC17.08■□□□□ 0.32
NIPAL3Q6P499 ACYP2-203ENST00000406041 1913 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
NIPAL3Q6P499 GAREM2-201ENST00000401533 4161 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
NIPAL3Q6P499 GABRD-205ENST00000638771 1707 ntAPPRIS ALT2 TSL 3 BASIC17.07■□□□□ 0.32
NIPAL3Q6P499 PNKP-207ENST00000596014 1665 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
NIPAL3Q6P499 SBDS-201ENST00000246868 1631 ntAPPRIS P2 TSL 1 (best) BASIC17.07■□□□□ 0.32
NIPAL3Q6P499 NAF1-202ENST00000422287 1604 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
NIPAL3Q6P499 CNOT9-209ENST00000627282 1621 ntTSL 2 BASIC17.07■□□□□ 0.32
NIPAL3Q6P499 PCOLCE-AS1-201ENST00000442166 2537 ntTSL 2 BASIC17.07■□□□□ 0.32
NIPAL3Q6P499 AMDHD2-201ENST00000293971 1459 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
NIPAL3Q6P499 ANKS3-230ENST00000614075 2387 ntAPPRIS P1 TSL 5 BASIC17.07■□□□□ 0.32
NIPAL3Q6P499 FAM222A-202ENST00000538780 3294 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
NIPAL3Q6P499 GPBAR1-202ENST00000519574 1382 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
NIPAL3Q6P499 PCDHA1-202ENST00000394633 2204 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
NIPAL3Q6P499 SYTL1-208ENST00000543823 2229 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
NIPAL3Q6P499 DDRGK1-201ENST00000354488 1306 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
NIPAL3Q6P499 PARP15-202ENST00000464300 2156 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
NIPAL3Q6P499 WDR74-201ENST00000278856 1289 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
NIPAL3Q6P499 NKAIN4-201ENST00000370307 793 ntTSL 5 BASIC17.07■□□□□ 0.32
NIPAL3Q6P499 MDFI-202ENST00000373050 809 ntTSL 2 BASIC17.07■□□□□ 0.32
NIPAL3Q6P499 FAM86C1-203ENST00000426628 952 ntAPPRIS ALT2 TSL 2 BASIC17.07■□□□□ 0.32
NIPAL3Q6P499 PEX26-203ENST00000428061 815 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
NIPAL3Q6P499 PPP1R14BP5-201ENST00000440334 435 ntBASIC17.07■□□□□ 0.32
NIPAL3Q6P499 WDR86-AS1-203ENST00000480632 704 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
NIPAL3Q6P499 KCNMA1-220ENST00000481070 896 ntTSL 2 BASIC17.07■□□□□ 0.32
NIPAL3Q6P499 MRPL2-207ENST00000487429 905 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
NIPAL3Q6P499 CXCL2-202ENST00000508487 1218 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
NIPAL3Q6P499 FOSL1-204ENST00000532401 1132 ntTSL 2 BASIC17.07■□□□□ 0.32
NIPAL3Q6P499 AL359399.1-201ENST00000557610 462 ntTSL 3 BASIC17.07■□□□□ 0.32
NIPAL3Q6P499 AC044860.1-201ENST00000560756 1160 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
NIPAL3Q6P499 AC113410.3-201ENST00000623366 203 ntBASIC17.07■□□□□ 0.32
NIPAL3Q6P499 NOP14-204ENST00000502735 2723 ntAPPRIS ALT2 TSL 5 BASIC17.07■□□□□ 0.32
NIPAL3Q6P499 AC005332.8-201ENST00000622750 2735 ntBASIC17.07■□□□□ 0.32
NIPAL3Q6P499 PRSS23-201ENST00000280258 4015 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
NIPAL3Q6P499 FAM228A-201ENST00000295150 1774 ntAPPRIS P2 TSL 1 (best) BASIC17.07■□□□□ 0.32
NIPAL3Q6P499 SERPINA4-201ENST00000298841 1784 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
NIPAL3Q6P499 MTSS1-203ENST00000431961 1711 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
NIPAL3Q6P499 FADS1-204ENST00000433932 1690 ntTSL 2 BASIC17.07■□□□□ 0.32
NIPAL3Q6P499 NOC2LP1-202ENST00000452600 2235 ntBASIC17.06■□□□□ 0.32
NIPAL3Q6P499 FBXL18-205ENST00000620087 2076 ntTSL 5 BASIC17.06■□□□□ 0.32
NIPAL3Q6P499 TSC22D4-202ENST00000393991 1469 ntTSL 2 BASIC17.06■□□□□ 0.32
NIPAL3Q6P499 CD8A-202ENST00000352580 1977 ntAPPRIS ALT2 TSL 2 BASIC17.06■□□□□ 0.32
NIPAL3Q6P499 NKD2-201ENST00000274150 1940 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
NIPAL3Q6P499 TXNRD3-203ENST00000524230 2950 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
NIPAL3Q6P499 MMD2-202ENST00000404774 2415 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
NIPAL3Q6P499 TBX20-201ENST00000408931 1871 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
NIPAL3Q6P499 QSOX2-201ENST00000358701 4530 ntAPPRIS P1 TSL 2 BASIC17.06■□□□□ 0.32
NIPAL3Q6P499 NAT6-201ENST00000354862 1330 ntAPPRIS P3 TSL 1 (best) BASIC17.06■□□□□ 0.32
NIPAL3Q6P499 METTL21A-201ENST00000272839 1210 ntTSL 5 BASIC17.06■□□□□ 0.32
NIPAL3Q6P499 COX7A1-201ENST00000292907 762 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
NIPAL3Q6P499 RAMP1-204ENST00000409726 734 ntTSL 3 BASIC17.06■□□□□ 0.32
NIPAL3Q6P499 AP000697.1-201ENST00000430607 339 ntTSL 5 BASIC17.06■□□□□ 0.32
NIPAL3Q6P499 PTPA-216ENST00000432651 857 ntTSL 2 BASIC17.06■□□□□ 0.32
NIPAL3Q6P499 AC117500.4-201ENST00000542797 617 ntTSL 3 BASIC17.06■□□□□ 0.32
NIPAL3Q6P499 TMEM235-204ENST00000551068 1187 ntAPPRIS P1 TSL 5 BASIC17.06■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 21.5 ms