Protein–RNA interactions for Protein: Q6DN03

HIST2H2BC, Putative histone H2B type 2-C, humanhuman

Predictions only

Length 193 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIST2H2BCQ6DN03 LSR-204ENST00000361790 2210 ntAPPRIS P4 TSL 1 (best) BASIC16.03■□□□□ 0.16
HIST2H2BCQ6DN03 ZFC3H1-206ENST00000548100 1771 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
HIST2H2BCQ6DN03 POU4F1-201ENST00000377208 4547 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
HIST2H2BCQ6DN03 SYT15-201ENST00000374321 1369 ntAPPRIS P4 TSL 2 BASIC16.03■□□□□ 0.16
HIST2H2BCQ6DN03 WDR4-202ENST00000398208 2122 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
HIST2H2BCQ6DN03 NUDT15-201ENST00000258662 2098 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
HIST2H2BCQ6DN03 DLK2-201ENST00000357338 2038 ntAPPRIS P3 TSL 2 BASIC16.03■□□□□ 0.16
HIST2H2BCQ6DN03 MRPL53-201ENST00000258105 1162 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
HIST2H2BCQ6DN03 PF4-201ENST00000296029 604 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
HIST2H2BCQ6DN03 TMEM179B-201ENST00000333449 1023 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
HIST2H2BCQ6DN03 TRAPPC3-203ENST00000373163 951 ntTSL 3 BASIC16.03■□□□□ 0.16
HIST2H2BCQ6DN03 ATP5G3-202ENST00000392541 842 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
HIST2H2BCQ6DN03 FAM19A5-204ENST00000406880 833 ntTSL 3 BASIC16.03■□□□□ 0.16
HIST2H2BCQ6DN03 LINC00237-202ENST00000455890 1220 ntTSL 2 BASIC16.03■□□□□ 0.16
HIST2H2BCQ6DN03 MRPL20-203ENST00000482352 1049 ntTSL 2 BASIC16.03■□□□□ 0.16
HIST2H2BCQ6DN03 AC136475.3-203ENST00000525217 617 ntTSL 2 BASIC16.03■□□□□ 0.16
HIST2H2BCQ6DN03 FAU-209ENST00000531743 697 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
HIST2H2BCQ6DN03 AC104390.1-201ENST00000555663 520 ntBASIC16.03■□□□□ 0.16
HIST2H2BCQ6DN03 MIR4469-201ENST00000583919 79 ntBASIC16.03■□□□□ 0.16
HIST2H2BCQ6DN03 LINC01607-201ENST00000607172 621 ntTSL 2 BASIC16.03■□□□□ 0.16
HIST2H2BCQ6DN03 GJA4-201ENST00000342280 1622 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
HIST2H2BCQ6DN03 PDE9A-205ENST00000349112 1616 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
HIST2H2BCQ6DN03 FIP1L1-201ENST00000306932 1878 ntAPPRIS ALT2 TSL 1 (best) BASIC16.03■□□□□ 0.16
HIST2H2BCQ6DN03 MEF2A-207ENST00000558812 2186 ntTSL 2 BASIC16.03■□□□□ 0.16
HIST2H2BCQ6DN03 ESAM-201ENST00000278927 1826 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
HIST2H2BCQ6DN03 IL6R-208ENST00000622330 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC16.03■□□□□ 0.16
HIST2H2BCQ6DN03 MRGBP-201ENST00000370487 2781 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
HIST2H2BCQ6DN03 PIGQ-206ENST00000422307 2052 ntTSL 3 BASIC16.03■□□□□ 0.16
HIST2H2BCQ6DN03 SH3RF3-201ENST00000309415 5803 ntAPPRIS P1 TSL 5 BASIC16.02■□□□□ 0.16
HIST2H2BCQ6DN03 FNDC8-201ENST00000158009 1388 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
HIST2H2BCQ6DN03 SCAND1-203ENST00000615116 1371 ntAPPRIS P1 TSL 5 BASIC16.02■□□□□ 0.16
HIST2H2BCQ6DN03 LINGO3-201ENST00000585527 2241 ntAPPRIS P1 BASIC16.02■□□□□ 0.16
HIST2H2BCQ6DN03 ME2-202ENST00000382927 2492 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
HIST2H2BCQ6DN03 WWC2-AS2-201ENST00000578387 2183 ntBASIC16.02■□□□□ 0.16
HIST2H2BCQ6DN03 TECR-201ENST00000215567 1171 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
HIST2H2BCQ6DN03 CD320-201ENST00000301458 1250 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
HIST2H2BCQ6DN03 MRPS16-201ENST00000372940 866 ntTSL 2 BASIC16.02■□□□□ 0.16
HIST2H2BCQ6DN03 CDC26-201ENST00000374206 872 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
HIST2H2BCQ6DN03 CREM-211ENST00000374726 1207 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
HIST2H2BCQ6DN03 MPST-202ENST00000397225 2116 ntAPPRIS P1 TSL 2 BASIC16.02■□□□□ 0.16
HIST2H2BCQ6DN03 ALG1L5P-201ENST00000482043 771 ntBASIC16.02■□□□□ 0.16
HIST2H2BCQ6DN03 OR7E14P-202ENST00000530490 1290 ntBASIC16.02■□□□□ 0.16
HIST2H2BCQ6DN03 NAA60-217ENST00000572942 1089 ntTSL 2 BASIC16.02■□□□□ 0.16
HIST2H2BCQ6DN03 ERCC1-212ENST00000591636 836 ntTSL 2 BASIC16.02■□□□□ 0.16
HIST2H2BCQ6DN03 AC010615.2-202ENST00000597444 832 ntTSL 3 BASIC16.02■□□□□ 0.16
HIST2H2BCQ6DN03 AC024563.2-201ENST00000603282 481 ntBASIC16.02■□□□□ 0.16
HIST2H2BCQ6DN03 ADORA1-208ENST00000618295 862 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
HIST2H2BCQ6DN03 AC233723.2-201ENST00000623798 2106 ntBASIC16.02■□□□□ 0.16
HIST2H2BCQ6DN03 C12orf42-201ENST00000378113 1513 ntAPPRIS P2 TSL 5 BASIC16.02■□□□□ 0.15
HIST2H2BCQ6DN03 AC148477.3-202ENST00000376617 1766 ntTSL 2 BASIC16.02■□□□□ 0.15
HIST2H2BCQ6DN03 WRNIP1-203ENST00000380771 2595 ntTSL 1 (best) BASIC16.02■□□□□ 0.15
HIST2H2BCQ6DN03 DNAJC28-203ENST00000402202 1480 ntAPPRIS P1 TSL 5 BASIC16.02■□□□□ 0.15
HIST2H2BCQ6DN03 AP002414.3-201ENST00000589352 1468 ntBASIC16.02■□□□□ 0.15
HIST2H2BCQ6DN03 CHAC1-205ENST00000617961 1498 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
HIST2H2BCQ6DN03 RHOV-201ENST00000220507 1705 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
HIST2H2BCQ6DN03 RNF39-201ENST00000244360 2206 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
HIST2H2BCQ6DN03 RIPPLY3-201ENST00000329553 2235 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
HIST2H2BCQ6DN03 SEPT5-209ENST00000438754 2241 ntTSL 2 BASIC16.02■□□□□ 0.15
HIST2H2BCQ6DN03 POLD2-202ENST00000406581 2158 ntAPPRIS P1 TSL 2 BASIC16.02■□□□□ 0.15
HIST2H2BCQ6DN03 SBDS-201ENST00000246868 1631 ntAPPRIS P2 TSL 1 (best) BASIC16.01■□□□□ 0.15
HIST2H2BCQ6DN03 ESYT3-201ENST00000289135 1356 ntTSL 5 BASIC16.01■□□□□ 0.15
HIST2H2BCQ6DN03 CCZ1B-201ENST00000316731 2885 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
HIST2H2BCQ6DN03 GYG1-202ENST00000345003 2052 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
HIST2H2BCQ6DN03 MEGF6-202ENST00000356575 5455 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
HIST2H2BCQ6DN03 POMGNT2-202ENST00000441964 2531 ntAPPRIS P1 TSL 4 BASIC16.01■□□□□ 0.15
HIST2H2BCQ6DN03 DVL1-204ENST00000610709 2268 ntTSL 2 BASIC16.01■□□□□ 0.15
HIST2H2BCQ6DN03 CLDN14-202ENST00000399135 1752 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
HIST2H2BCQ6DN03 AL390860.1-201ENST00000449298 1541 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
HIST2H2BCQ6DN03 RAX-201ENST00000256852 2935 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
HIST2H2BCQ6DN03 PNMT-202ENST00000394246 821 ntTSL 2 BASIC16.01■□□□□ 0.15
HIST2H2BCQ6DN03 MIR503HG-203ENST00000441492 649 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
HIST2H2BCQ6DN03 BCRP1-201ENST00000444246 691 ntBASIC16.01■□□□□ 0.15
HIST2H2BCQ6DN03 PPOX-214ENST00000535223 664 ntTSL 3 BASIC16.01■□□□□ 0.15
HIST2H2BCQ6DN03 AC087741.1-203ENST00000576824 820 ntTSL 3 BASIC16.01■□□□□ 0.15
HIST2H2BCQ6DN03 AP002472.1-201ENST00000577490 586 ntBASIC16.01■□□□□ 0.15
HIST2H2BCQ6DN03 ELOF1-204ENST00000587806 1172 ntTSL 2 BASIC16.01■□□□□ 0.15
HIST2H2BCQ6DN03 HEXIM2-207ENST00000592695 1246 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
HIST2H2BCQ6DN03 AC004130.1-202ENST00000603156 666 ntTSL 2 BASIC16.01■□□□□ 0.15
HIST2H2BCQ6DN03 EGFL7-201ENST00000308874 1747 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
HIST2H2BCQ6DN03 DNAAF3-201ENST00000391720 2169 ntAPPRIS P3 TSL 2 BASIC16.01■□□□□ 0.15
HIST2H2BCQ6DN03 CRYZL1-203ENST00000381540 1482 ntTSL 2 BASIC16.01■□□□□ 0.15
HIST2H2BCQ6DN03 TEX264-215ENST00000611400 1488 ntAPPRIS P3 TSL 5 BASIC16.01■□□□□ 0.15
HIST2H2BCQ6DN03 MEF2D-203ENST00000368240 1905 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
HIST2H2BCQ6DN03 RGS20-202ENST00000297313 2104 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
HIST2H2BCQ6DN03 REXO1-201ENST00000170168 4591 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
HIST2H2BCQ6DN03 CDC42EP2-201ENST00000279249 2023 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
HIST2H2BCQ6DN03 ALG1L9P-201ENST00000508969 2165 ntTSL 1 (best) BASIC16■□□□□ 0.15
HIST2H2BCQ6DN03 WNT8A-204ENST00000506684 1543 ntTSL 1 (best) BASIC16■□□□□ 0.15
HIST2H2BCQ6DN03 TMED4-203ENST00000457408 2322 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
HIST2H2BCQ6DN03 C19orf12-201ENST00000323670 2464 ntAPPRIS P1 TSL 2 BASIC16■□□□□ 0.15
HIST2H2BCQ6DN03 C1QL4-201ENST00000334221 2071 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
HIST2H2BCQ6DN03 C1orf210-202ENST00000523677 1478 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
HIST2H2BCQ6DN03 UPK2-201ENST00000264031 916 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
HIST2H2BCQ6DN03 SFTPD-201ENST00000372292 1281 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
HIST2H2BCQ6DN03 C1QC-201ENST00000374637 1089 ntAPPRIS P1 TSL 3 BASIC16■□□□□ 0.15
HIST2H2BCQ6DN03 AC092474.2-201ENST00000424288 719 ntBASIC16■□□□□ 0.15
HIST2H2BCQ6DN03 RNASE10-202ENST00000430083 1172 ntTSL 2 BASIC16■□□□□ 0.15
HIST2H2BCQ6DN03 AL121672.1-201ENST00000439423 1181 ntTSL 1 (best) BASIC16■□□□□ 0.15
HIST2H2BCQ6DN03 AL133375.1-201ENST00000500590 980 ntTSL 5 BASIC16■□□□□ 0.15
HIST2H2BCQ6DN03 PNMT-203ENST00000581428 677 ntTSL 2 BASIC16■□□□□ 0.15
Retrieved 100 of 98,524 protein–RNA pairs in 19.7 ms