Protein–RNA interactions for Protein: Q5VT25

CDC42BPA, Serine/threonine-protein kinase MRCK alpha, humanhuman

Predictions only

Length 1,732 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPAQ5VT25 AL512343.2-201ENST00000609423 490 ntTSL 2 BASIC28.38■■■□□ 2.13
CDC42BPAQ5VT25 NDUFA10-203ENST00000404554 1557 ntTSL 5 BASIC28.38■■■□□ 2.13
CDC42BPAQ5VT25 CCT6P1-202ENST00000442266 1317 ntTSL 2 BASIC28.38■■■□□ 2.13
CDC42BPAQ5VT25 ENTPD6-203ENST00000376652 2750 ntAPPRIS P3 TSL 1 (best) BASIC28.38■■■□□ 2.13
CDC42BPAQ5VT25 RIOX1-201ENST00000304061 2429 ntAPPRIS P1 BASIC28.38■■■□□ 2.13
CDC42BPAQ5VT25 PMPCB-202ENST00000428154 1714 ntTSL 1 (best) BASIC28.38■■■□□ 2.13
CDC42BPAQ5VT25 AC099805.1-202ENST00000519927 1057 ntTSL 5 BASIC28.38■■■□□ 2.13
CDC42BPAQ5VT25 SAXO2-206ENST00000566205 340 ntAPPRIS ALT2 TSL 2 BASIC28.38■■■□□ 2.13
CDC42BPAQ5VT25 AC124864.1-201ENST00000623408 392 ntBASIC28.38■■■□□ 2.13
CDC42BPAQ5VT25 RNF135-201ENST00000324689 1905 ntTSL 1 (best) BASIC28.37■■■□□ 2.13
CDC42BPAQ5VT25 AC006001.3-204ENST00000638711 2103 ntTSL 5 BASIC28.37■■■□□ 2.13
CDC42BPAQ5VT25 SCRN2-202ENST00000407215 1779 ntTSL 1 (best) BASIC28.37■■■□□ 2.13
CDC42BPAQ5VT25 ARSI-203ENST00000515301 1429 ntTSL 4 BASIC28.37■■■□□ 2.13
CDC42BPAQ5VT25 SYT17-207ENST00000568115 1721 ntTSL 5 BASIC28.37■■■□□ 2.13
CDC42BPAQ5VT25 EXOSC4-201ENST00000316052 887 ntAPPRIS P1 TSL 1 (best) BASIC28.37■■■□□ 2.13
CDC42BPAQ5VT25 UBXN10-AS1-201ENST00000442226 510 ntTSL 2 BASIC28.37■■■□□ 2.13
CDC42BPAQ5VT25 AL137026.1-202ENST00000452578 1089 ntTSL 2 BASIC28.37■■■□□ 2.13
CDC42BPAQ5VT25 MRPL52-210ENST00000555345 895 ntTSL 2 BASIC28.37■■■□□ 2.13
CDC42BPAQ5VT25 DNASE1L2-206ENST00000613572 1260 ntAPPRIS P1 TSL 5 BASIC28.37■■■□□ 2.13
CDC42BPAQ5VT25 SCAND1-203ENST00000615116 1371 ntAPPRIS P1 TSL 5 BASIC28.37■■■□□ 2.13
CDC42BPAQ5VT25 EEF1AKMT2-201ENST00000368836 1462 ntAPPRIS P1 TSL 1 (best) BASIC28.37■■■□□ 2.13
CDC42BPAQ5VT25 EPHA6-202ENST00000470610 2058 ntTSL 2 BASIC28.37■■■□□ 2.13
CDC42BPAQ5VT25 LINC01521-201ENST00000504184 1943 ntBASIC28.36■■■□□ 2.13
CDC42BPAQ5VT25 PITHD1-201ENST00000246151 1603 ntAPPRIS P1 TSL 1 (best) BASIC28.36■■■□□ 2.13
CDC42BPAQ5VT25 GCOM1-201ENST00000380568 1516 ntAPPRIS ALT2 TSL 2 BASIC28.36■■■□□ 2.13
CDC42BPAQ5VT25 WFDC1-203ENST00000568638 1319 ntAPPRIS P1 TSL 2 BASIC28.36■■■□□ 2.13
CDC42BPAQ5VT25 MRPS5-201ENST00000272418 1652 ntAPPRIS P1 TSL 1 (best) BASIC28.36■■■□□ 2.13
CDC42BPAQ5VT25 TRIM13-206ENST00000457662 1489 ntAPPRIS P3 TSL 1 (best) BASIC28.36■■■□□ 2.13
CDC42BPAQ5VT25 HES2-202ENST00000377836 507 ntTSL 2 BASIC28.36■■■□□ 2.13
CDC42BPAQ5VT25 LSM5-204ENST00000409909 740 ntTSL 2 BASIC28.36■■■□□ 2.13
CDC42BPAQ5VT25 ORAOV1-210ENST00000539414 817 ntAPPRIS ALT1 TSL 2 BASIC28.36■■■□□ 2.13
CDC42BPAQ5VT25 NDUFA6-204ENST00000617763 1183 ntTSL 1 (best) BASIC28.36■■■□□ 2.13
CDC42BPAQ5VT25 HSP90B1-211ENST00000640977 1127 ntTSL 5 BASIC28.36■■■□□ 2.13
CDC42BPAQ5VT25 POLI-202ENST00000406285 2030 ntTSL 2 BASIC28.36■■■□□ 2.13
CDC42BPAQ5VT25 ZNF667-AS1-201ENST00000585445 1521 ntTSL 1 (best) BASIC28.36■■■□□ 2.13
CDC42BPAQ5VT25 PCDHB11-202ENST00000624887 1973 ntTSL 2 BASIC28.36■■■□□ 2.13
CDC42BPAQ5VT25 TICAM1-202ENST00000621756 1650 ntTSL 5 BASIC28.36■■■□□ 2.13
CDC42BPAQ5VT25 DLK2-203ENST00000372488 1590 ntAPPRIS P3 TSL 1 (best) BASIC28.36■■■□□ 2.13
CDC42BPAQ5VT25 GALNS-201ENST00000268695 2363 ntAPPRIS P1 TSL 1 (best) BASIC28.36■■■□□ 2.13
CDC42BPAQ5VT25 MUTYH-203ENST00000372098 1839 ntTSL 1 (best) BASIC28.35■■■□□ 2.13
CDC42BPAQ5VT25 MUTYH-204ENST00000372104 1823 ntAPPRIS ALT2 TSL 1 (best) BASIC28.35■■■□□ 2.13
CDC42BPAQ5VT25 MUTYH-205ENST00000372110 1809 ntTSL 1 (best) BASIC28.35■■■□□ 2.13
CDC42BPAQ5VT25 EXOSC3-202ENST00000396521 768 ntTSL 2 BASIC28.35■■■□□ 2.13
CDC42BPAQ5VT25 HOXA11-AS1_5.1-201ENST00000620211 203 ntBASIC28.35■■■□□ 2.13
CDC42BPAQ5VT25 ASMTL-206ENST00000534940 2048 ntTSL 2 BASIC28.35■■■□□ 2.13
CDC42BPAQ5VT25 PLD6-201ENST00000321560 2560 ntAPPRIS P1 TSL 1 (best) BASIC28.35■■■□□ 2.13
CDC42BPAQ5VT25 LINC00466-207ENST00000634725 1736 ntTSL 5 BASIC28.35■■■□□ 2.13
CDC42BPAQ5VT25 CMTM1-204ENST00000336328 606 ntAPPRIS ALT2 TSL 1 (best) BASIC28.35■■■□□ 2.13
CDC42BPAQ5VT25 VENTXP7-201ENST00000475503 772 ntBASIC28.35■■■□□ 2.13
CDC42BPAQ5VT25 CMTM1-213ENST00000529506 581 ntAPPRIS ALT2 TSL 1 (best) BASIC28.35■■■□□ 2.13
CDC42BPAQ5VT25 AC087289.1-201ENST00000586808 890 ntTSL 5 BASIC28.35■■■□□ 2.13
CDC42BPAQ5VT25 MUC1-224ENST00000611577 1023 ntTSL 1 (best) BASIC28.35■■■□□ 2.13
CDC42BPAQ5VT25 IRF3-202ENST00000377135 1442 ntTSL 1 (best) BASIC28.34■■■□□ 2.13
CDC42BPAQ5VT25 AL357033.4-201ENST00000617703 1807 ntBASIC28.34■■■□□ 2.13
CDC42BPAQ5VT25 DNAJB5-203ENST00000453597 2589 ntTSL 2 BASIC28.34■■■□□ 2.13
CDC42BPAQ5VT25 UBL4A-202ENST00000369660 2382 ntAPPRIS P1 TSL 1 (best) BASIC28.34■■■□□ 2.13
CDC42BPAQ5VT25 TTC12-202ENST00000393020 2541 ntTSL 5 BASIC28.34■■■□□ 2.13
CDC42BPAQ5VT25 EMD-201ENST00000369835 966 ntTSL 3 BASIC28.34■■■□□ 2.13
CDC42BPAQ5VT25 NTMT1-205ENST00000459968 1123 ntTSL 2 BASIC28.34■■■□□ 2.13
CDC42BPAQ5VT25 NTMT1-207ENST00000482347 1072 ntTSL 2 BASIC28.34■■■□□ 2.13
CDC42BPAQ5VT25 AC016876.1-204ENST00000573187 679 ntTSL 3 BASIC28.34■■■□□ 2.13
CDC42BPAQ5VT25 FLT3LG-206ENST00000597551 951 ntAPPRIS P1 TSL 1 (best) BASIC28.34■■■□□ 2.13
CDC42BPAQ5VT25 CXorf40B-205ENST00000462691 1440 ntAPPRIS ALT1 TSL 3 BASIC28.34■■■□□ 2.13
CDC42BPAQ5VT25 P2RY6-207ENST00000538328 1425 ntAPPRIS P1 TSL 3 BASIC28.34■■■□□ 2.13
CDC42BPAQ5VT25 SIX5-203ENST00000560168 1975 ntTSL 4 BASIC28.33■■■□□ 2.13
CDC42BPAQ5VT25 CPNE2-201ENST00000290776 2645 ntAPPRIS P1 TSL 1 (best) BASIC28.33■■■□□ 2.13
CDC42BPAQ5VT25 EIF2B1-201ENST00000424014 2477 ntAPPRIS P1 TSL 1 (best) BASIC28.33■■■□□ 2.13
CDC42BPAQ5VT25 ANKRD37-201ENST00000335174 1141 ntAPPRIS P1 TSL 1 (best) BASIC28.33■■■□□ 2.13
CDC42BPAQ5VT25 NPFFR2-202ENST00000344413 1234 ntTSL 1 (best) BASIC28.33■■■□□ 2.13
CDC42BPAQ5VT25 AC007834.1-201ENST00000446473 728 ntTSL 3 BASIC28.33■■■□□ 2.13
CDC42BPAQ5VT25 CCDC61-201ENST00000536603 1282 ntAPPRIS ALT2 TSL 1 (best) BASIC28.33■■■□□ 2.13
CDC42BPAQ5VT25 AC099518.3-201ENST00000564808 809 ntAPPRIS P5 TSL 4 BASIC28.33■■■□□ 2.13
CDC42BPAQ5VT25 ZNF420-201ENST00000304239 1945 ntTSL 2 BASIC28.33■■■□□ 2.13
CDC42BPAQ5VT25 TFAP2A-202ENST00000379608 2576 ntAPPRIS ALT1 TSL 1 (best) BASIC28.33■■■□□ 2.13
CDC42BPAQ5VT25 FOXD4-201ENST00000382500 1974 ntAPPRIS P1 BASIC28.33■■■□□ 2.13
CDC42BPAQ5VT25 IRGC-201ENST00000244314 1662 ntAPPRIS P1 TSL 1 (best) BASIC28.33■■■□□ 2.13
CDC42BPAQ5VT25 CELF6-204ENST00000543764 1676 ntTSL 2 BASIC28.33■■■□□ 2.13
CDC42BPAQ5VT25 TRIM46-204ENST00000368385 1864 ntTSL 1 (best) BASIC28.33■■■□□ 2.13
CDC42BPAQ5VT25 MYCN-201ENST00000281043 2602 ntAPPRIS P1 TSL 5 BASIC28.33■■■□□ 2.13
CDC42BPAQ5VT25 GPR3-201ENST00000374024 2115 ntAPPRIS P1 TSL 1 (best) BASIC28.33■■■□□ 2.12
CDC42BPAQ5VT25 CASTOR1-202ENST00000407689 1623 ntAPPRIS P1 TSL 1 (best) BASIC28.32■■■□□ 2.12
CDC42BPAQ5VT25 CD320-201ENST00000301458 1250 ntAPPRIS P1 TSL 1 (best) BASIC28.32■■■□□ 2.12
CDC42BPAQ5VT25 MAL-203ENST00000353004 873 ntTSL 1 (best) BASIC28.32■■■□□ 2.12
CDC42BPAQ5VT25 CD1E-209ENST00000368164 869 ntTSL 1 (best) BASIC28.32■■■□□ 2.12
CDC42BPAQ5VT25 C1QC-203ENST00000374640 1163 ntAPPRIS P1 TSL 1 (best) BASIC28.32■■■□□ 2.12
CDC42BPAQ5VT25 TSFM-208ENST00000543727 651 ntTSL 1 (best) BASIC28.32■■■□□ 2.12
CDC42BPAQ5VT25 AC104971.2-201ENST00000588144 1209 ntTSL 2 BASIC28.32■■■□□ 2.12
CDC42BPAQ5VT25 TPSD1-201ENST00000211076 1499 ntAPPRIS P2 TSL 1 (best) BASIC28.32■■■□□ 2.12
CDC42BPAQ5VT25 MRPS7-204ENST00000579761 1717 ntTSL 2 BASIC28.32■■■□□ 2.12
CDC42BPAQ5VT25 AL353692.3-201ENST00000407031 1396 ntBASIC28.32■■■□□ 2.12
CDC42BPAQ5VT25 TWIST2-202ENST00000612363 1404 ntAPPRIS P1 TSL 1 (best) BASIC28.32■■■□□ 2.12
CDC42BPAQ5VT25 B3GAT3-202ENST00000531383 2056 ntTSL 2 BASIC28.32■■■□□ 2.12
CDC42BPAQ5VT25 PPIE-208ENST00000470213 927 ntTSL 3 BASIC28.32■■■□□ 2.12
CDC42BPAQ5VT25 AC068594.1-202ENST00000581657 749 ntTSL 3 BASIC28.32■■■□□ 2.12
CDC42BPAQ5VT25 CALM3-211ENST00000598871 561 ntTSL 4 BASIC28.32■■■□□ 2.12
CDC42BPAQ5VT25 SYNGR4-204ENST00000601610 859 ntTSL 3 BASIC28.32■■■□□ 2.12
CDC42BPAQ5VT25 LIN28B-AS1-205ENST00000637414 879 ntTSL 5 BASIC28.32■■■□□ 2.12
CDC42BPAQ5VT25 CXCL16-201ENST00000293778 2222 ntAPPRIS P2 TSL 1 (best) BASIC28.31■■■□□ 2.12
CDC42BPAQ5VT25 RTN4RL2-201ENST00000335099 2203 ntAPPRIS P1 TSL 1 (best) BASIC28.31■■■□□ 2.12
CDC42BPAQ5VT25 CEP85L-205ENST00000419517 2079 ntAPPRIS P3 TSL 1 (best) BASIC28.31■■■□□ 2.12
Retrieved 100 of 98,524 protein–RNA pairs in 27.9 ms