Protein–RNA interactions for Protein: Q53EL6

PDCD4, Programmed cell death protein 4, humanhuman

Known RBP Predictions only

Length 469 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDCD4Q53EL6 NFYC-AS1-201ENST00000606277 1687 ntBASIC18.03■□□□□ 0.48
PDCD4Q53EL6 UBXN2A-201ENST00000309033 6066 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
PDCD4Q53EL6 CCT7-215ENST00000539919 2031 ntTSL 2 BASIC18.03■□□□□ 0.48
PDCD4Q53EL6 LHX8-201ENST00000294638 2373 ntAPPRIS P3 TSL 1 (best) BASIC18.03■□□□□ 0.48
PDCD4Q53EL6 ULK2-201ENST00000361658 3908 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
PDCD4Q53EL6 DMRT3-201ENST00000190165 2183 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
PDCD4Q53EL6 AP5S1-203ENST00000379573 1848 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
PDCD4Q53EL6 PCDHA2-203ENST00000526136 5254 ntAPPRIS P2 TSL 1 (best) BASIC18.03■□□□□ 0.48
PDCD4Q53EL6 ZC3H12D-201ENST00000409806 5791 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
PDCD4Q53EL6 HARBI1-201ENST00000326737 1967 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
PDCD4Q53EL6 GBGT1-203ENST00000372040 1980 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
PDCD4Q53EL6 RNF128-201ENST00000255499 2817 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
PDCD4Q53EL6 PCCA-202ENST00000376285 2494 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
PDCD4Q53EL6 HAGH-201ENST00000397353 1257 ntAPPRIS ALT1 TSL 5 BASIC18.03■□□□□ 0.48
PDCD4Q53EL6 GCC2-AS1-202ENST00000440975 574 ntTSL 4 BASIC18.03■□□□□ 0.48
PDCD4Q53EL6 GLRB-205ENST00000512619 728 ntTSL 3 BASIC18.03■□□□□ 0.48
PDCD4Q53EL6 C17orf107-202ENST00000521575 1275 ntAPPRIS ALT2 TSL 1 (best) BASIC18.03■□□□□ 0.48
PDCD4Q53EL6 LIMD2-206ENST00000578993 602 ntTSL 3 BASIC18.03■□□□□ 0.48
PDCD4Q53EL6 LINC00654-202ENST00000589201 579 ntTSL 3 BASIC18.03■□□□□ 0.48
PDCD4Q53EL6 DEDD2-205ENST00000596251 1183 ntAPPRIS P3 TSL 1 (best) BASIC18.03■□□□□ 0.48
PDCD4Q53EL6 AC013268.1-201ENST00000639717 1208 ntTSL 5 BASIC18.03■□□□□ 0.48
PDCD4Q53EL6 ACSL6-205ENST00000379246 2622 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
PDCD4Q53EL6 TMEM235-203ENST00000550981 1786 ntTSL 2 BASIC18.03■□□□□ 0.48
PDCD4Q53EL6 PLK1-201ENST00000300093 2227 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
PDCD4Q53EL6 MAPRE3-201ENST00000233121 1892 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
PDCD4Q53EL6 FAM49B-214ENST00000519540 2021 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
PDCD4Q53EL6 PRDM12-201ENST00000253008 2476 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
PDCD4Q53EL6 TNPO2-203ENST00000450764 4993 ntAPPRIS ALT1 TSL 1 (best) BASIC18.02■□□□□ 0.48
PDCD4Q53EL6 GSEC-201ENST00000626810 2289 ntTSL 2 BASIC18.02■□□□□ 0.48
PDCD4Q53EL6 RNASEH2C-203ENST00000528220 1337 ntTSL 2 BASIC18.02■□□□□ 0.48
PDCD4Q53EL6 CDH24-201ENST00000267383 2873 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
PDCD4Q53EL6 LINC02361-201ENST00000538731 1484 ntTSL 2 BASIC18.02■□□□□ 0.48
PDCD4Q53EL6 POMC-201ENST00000264708 1074 ntAPPRIS P1 TSL 2 BASIC18.02■□□□□ 0.48
PDCD4Q53EL6 SLC39A5-201ENST00000266980 2031 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
PDCD4Q53EL6 TRIM61-201ENST00000329314 1582 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
PDCD4Q53EL6 ANG-201ENST00000336811 1222 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
PDCD4Q53EL6 FGFR1-203ENST00000341462 6054 ntTSL 5 BASIC18.02■□□□□ 0.48
PDCD4Q53EL6 DUS1L-202ENST00000354321 2151 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
PDCD4Q53EL6 ZZZ3-201ENST00000370798 2468 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
PDCD4Q53EL6 MINPP1-201ENST00000371994 2183 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
PDCD4Q53EL6 ASMTL-AS1-203ENST00000425740 840 ntTSL 2 BASIC18.02■□□□□ 0.48
PDCD4Q53EL6 POU5F1P3-201ENST00000428824 1078 ntBASIC18.02■□□□□ 0.48
PDCD4Q53EL6 DYNLT3-203ENST00000432389 719 ntTSL 5 BASIC18.02■□□□□ 0.48
PDCD4Q53EL6 LINC00969-218ENST00000452844 583 ntTSL 3 BASIC18.02■□□□□ 0.48
PDCD4Q53EL6 LINC00969-221ENST00000457233 1279 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
PDCD4Q53EL6 AC099522.1-201ENST00000505955 881 ntTSL 3 BASIC18.02■□□□□ 0.48
PDCD4Q53EL6 AC127496.6-201ENST00000576215 338 ntTSL 3 BASIC18.02■□□□□ 0.48
PDCD4Q53EL6 AC005225.2-202ENST00000617980 408 ntTSL 4 BASIC18.02■□□□□ 0.48
PDCD4Q53EL6 MAP6-201ENST00000304771 3334 ntAPPRIS P3 TSL 1 (best) BASIC18.02■□□□□ 0.48
PDCD4Q53EL6 WIPF1-206ENST00000409891 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC18.02■□□□□ 0.47
PDCD4Q53EL6 PLEKHB1-203ENST00000398492 2275 ntAPPRIS ALT1 TSL 1 (best) BASIC18.02■□□□□ 0.47
PDCD4Q53EL6 DNAJA3-203ENST00000431375 2294 ntTSL 2 BASIC18.02■□□□□ 0.47
PDCD4Q53EL6 BAIAP2L2-202ENST00000381669 2146 ntAPPRIS P2 TSL 1 (best) BASIC18.02■□□□□ 0.47
PDCD4Q53EL6 ACSM2A-201ENST00000219054 1988 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
PDCD4Q53EL6 PLIN2-201ENST00000276914 1972 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
PDCD4Q53EL6 FN3KRP-201ENST00000269373 1849 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
PDCD4Q53EL6 KDM4B-202ENST00000381759 3058 ntTSL 1 (best) BASIC18.02■□□□□ 0.47
PDCD4Q53EL6 B4GALT2-202ENST00000356836 2629 ntAPPRIS P1 TSL 2 BASIC18.02■□□□□ 0.47
PDCD4Q53EL6 RFC2-213ENST00000621097 1635 ntTSL 5 BASIC18.01■□□□□ 0.47
PDCD4Q53EL6 SCOC-208ENST00000510586 2193 ntAPPRIS ALT1 TSL 5 BASIC18.01■□□□□ 0.47
PDCD4Q53EL6 PRORSD1P-202ENST00000563365 2154 ntBASIC18.01■□□□□ 0.47
PDCD4Q53EL6 THOP1-201ENST00000307741 4804 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
PDCD4Q53EL6 KCNN4-209ENST00000615047 2029 ntTSL 5 BASIC18.01■□□□□ 0.47
PDCD4Q53EL6 LURAP1-201ENST00000371980 1854 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
PDCD4Q53EL6 PTTG1IP-203ENST00000397887 2413 ntTSL 4 BASIC18.01■□□□□ 0.47
PDCD4Q53EL6 GTF2H4-201ENST00000259895 1735 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
PDCD4Q53EL6 FDXR-203ENST00000420580 1705 ntTSL 2 BASIC18.01■□□□□ 0.47
PDCD4Q53EL6 SERGEF-201ENST00000265965 1566 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
PDCD4Q53EL6 AGO4-201ENST00000373210 7116 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
PDCD4Q53EL6 ZNF200-202ENST00000396870 2373 ntAPPRIS ALT2 TSL 1 (best) BASIC18.01■□□□□ 0.47
PDCD4Q53EL6 LINC02028-204ENST00000449350 1419 ntTSL 3 BASIC18.01■□□□□ 0.47
PDCD4Q53EL6 KANK4-204ENST00000371153 4665 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
PDCD4Q53EL6 DDX42-216ENST00000583590 4148 ntAPPRIS P1 TSL 5 BASIC18.01■□□□□ 0.47
PDCD4Q53EL6 PRKRIP1-208ENST00000496391 3430 ntAPPRIS P1 TSL 2 BASIC18.01■□□□□ 0.47
PDCD4Q53EL6 PARL-201ENST00000311101 1240 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
PDCD4Q53EL6 RTL8A-201ENST00000370775 1244 ntAPPRIS P1 BASIC18.01■□□□□ 0.47
PDCD4Q53EL6 C6orf48-205ENST00000375640 1053 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
PDCD4Q53EL6 Z98884.1-201ENST00000451646 830 ntTSL 3 BASIC18.01■□□□□ 0.47
PDCD4Q53EL6 AC108693.2-201ENST00000492981 303 ntTSL 3 BASIC18.01■□□□□ 0.47
PDCD4Q53EL6 Z85996.1-201ENST00000494644 937 ntBASIC18.01■□□□□ 0.47
PDCD4Q53EL6 ELAC1-203ENST00000588577 694 ntTSL 2 BASIC18.01■□□□□ 0.47
PDCD4Q53EL6 ZNF667-AS1-206ENST00000591797 535 ntTSL 5 BASIC18.01■□□□□ 0.47
PDCD4Q53EL6 PLAUR-203ENST00000340093 1548 ntAPPRIS P3 TSL 1 (best) BASIC18.01■□□□□ 0.47
PDCD4Q53EL6 TMPRSS9-205ENST00000613480 2568 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
PDCD4Q53EL6 PDLIM3-202ENST00000284770 1766 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
PDCD4Q53EL6 ZCCHC24-202ENST00000372336 4933 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
PDCD4Q53EL6 CEMP1-202ENST00000567119 1374 ntAPPRIS P2 BASIC18.01■□□□□ 0.47
PDCD4Q53EL6 KLHDC10-201ENST00000335420 6437 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
PDCD4Q53EL6 SPART-209ENST00000494062 3018 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
PDCD4Q53EL6 NAT16-204ENST00000455377 1492 ntAPPRIS P2 TSL 1 (best) BASIC18.01■□□□□ 0.47
PDCD4Q53EL6 CADPS2-202ENST00000334010 6045 ntAPPRIS ALT2 TSL 5 BASIC18■□□□□ 0.47
PDCD4Q53EL6 PDLIM7-203ENST00000359895 1567 ntAPPRIS ALT2 TSL 1 (best) BASIC18■□□□□ 0.47
PDCD4Q53EL6 AIFM3-203ENST00000405089 2333 ntAPPRIS ALT1 TSL 2 BASIC18■□□□□ 0.47
PDCD4Q53EL6 AC118553.2-203ENST00000639037 2590 ntAPPRIS P5 TSL 5 BASIC18■□□□□ 0.47
PDCD4Q53EL6 NETO1-201ENST00000327305 3058 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
PDCD4Q53EL6 MAP3K6-207ENST00000493901 4309 ntAPPRIS P1 TSL 5 BASIC18■□□□□ 0.47
PDCD4Q53EL6 AP2M1-201ENST00000292807 1931 ntAPPRIS P4 TSL 5 BASIC18■□□□□ 0.47
PDCD4Q53EL6 STK11-201ENST00000326873 2611 ntAPPRIS P2 TSL 1 (best) BASIC18■□□□□ 0.47
PDCD4Q53EL6 PPP1R7-201ENST00000234038 2386 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
PDCD4Q53EL6 CCNI2-201ENST00000378731 2355 ntAPPRIS P3 TSL 1 (best) BASIC18■□□□□ 0.47
Retrieved 100 of 98,524 protein–RNA pairs in 38.2 ms