Protein–RNA interactions for Protein: Q52M75

LINC01554, Putative uncharacterized protein encoded by LINC01554, humanhuman

Predictions only

Length 96 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01554Q52M75 NAGK-229ENST00000613852 1801 ntTSL 1 (best) BASIC9.43□□□□□ -0.9
LINC01554Q52M75 BASP1-203ENST00000616743 1711 ntAPPRIS P1 TSL 3 BASIC9.43□□□□□ -0.9
LINC01554Q52M75 SIDT1-201ENST00000264852 5080 ntAPPRIS P1 TSL 2 BASIC9.43□□□□□ -0.9
LINC01554Q52M75 TTC28-AS1-219ENST00000454741 5064 ntTSL 1 (best) BASIC9.43□□□□□ -0.9
LINC01554Q52M75 C16orf59-201ENST00000361837 1662 ntAPPRIS P2 TSL 1 (best) BASIC9.43□□□□□ -0.9
LINC01554Q52M75 TPM1-204ENST00000334895 1637 ntTSL 1 (best) BASIC9.43□□□□□ -0.9
LINC01554Q52M75 R3HDM2-201ENST00000347140 4331 ntAPPRIS P2 TSL 1 (best) BASIC9.43□□□□□ -0.9
LINC01554Q52M75 ECHDC1-203ENST00000368291 1354 ntTSL 2 BASIC9.43□□□□□ -0.9
LINC01554Q52M75 CTAG1B-202ENST00000359887 998 ntTSL 2 BASIC9.43□□□□□ -0.9
LINC01554Q52M75 RNF208-201ENST00000391553 1077 ntAPPRIS P1 BASIC9.43□□□□□ -0.9
LINC01554Q52M75 SMIM29-205ENST00000468145 903 ntTSL 2 BASIC9.43□□□□□ -0.9
LINC01554Q52M75 SMIM29-207ENST00000481533 1053 ntAPPRIS P1 TSL 1 (best) BASIC9.43□□□□□ -0.9
LINC01554Q52M75 DTWD2-204ENST00000515439 1275 ntTSL 5 BASIC9.43□□□□□ -0.9
LINC01554Q52M75 CFD-202ENST00000592860 809 ntAPPRIS ALT2 TSL 1 (best) BASIC9.43□□□□□ -0.9
LINC01554Q52M75 CCDC194-202ENST00000636079 705 ntAPPRIS P1 TSL 5 BASIC9.43□□□□□ -0.9
LINC01554Q52M75 TSHZ1-204ENST00000580243 3582 ntAPPRIS P1 TSL 2 BASIC9.43□□□□□ -0.9
LINC01554Q52M75 ADGRA1-AS1-201ENST00000366099 3236 ntBASIC9.43□□□□□ -0.9
LINC01554Q52M75 SYBU-205ENST00000422135 3226 ntAPPRIS ALT2 TSL 5 BASIC9.43□□□□□ -0.9
LINC01554Q52M75 FGFR2-215ENST00000457416 3061 ntAPPRIS P3 TSL 1 (best) BASIC9.43□□□□□ -0.9
LINC01554Q52M75 NCOR2-203ENST00000404621 8520 ntAPPRIS ALT2 TSL 1 (best) BASIC9.43□□□□□ -0.9
LINC01554Q52M75 ITPK1-202ENST00000354313 2803 ntTSL 1 (best) BASIC9.43□□□□□ -0.9
LINC01554Q52M75 NLRX1-202ENST00000409109 4092 ntAPPRIS P1 TSL 1 (best) BASIC9.43□□□□□ -0.9
LINC01554Q52M75 LRRC57-204ENST00000563454 2407 ntAPPRIS P1 TSL 2 BASIC9.43□□□□□ -0.9
LINC01554Q52M75 NPNT-214ENST00000514622 2362 ntTSL 2 BASIC9.43□□□□□ -0.9
LINC01554Q52M75 UMOD-205ENST00000570689 2315 ntAPPRIS P3 TSL 5 BASIC9.43□□□□□ -0.9
LINC01554Q52M75 UBXN11-201ENST00000314675 2254 ntAPPRIS ALT2 TSL 2 BASIC9.43□□□□□ -0.9
LINC01554Q52M75 TRPM2-204ENST00000397932 5216 ntAPPRIS ALT2 TSL 1 (best) BASIC9.43□□□□□ -0.9
LINC01554Q52M75 PGS1-201ENST00000262764 2201 ntAPPRIS P1 TSL 1 (best) BASIC9.43□□□□□ -0.9
LINC01554Q52M75 TRIP10-210ENST00000600428 2249 ntTSL 5 BASIC9.43□□□□□ -0.9
LINC01554Q52M75 WSCD1-209ENST00000574232 2129 ntAPPRIS P1 TSL 5 BASIC9.43□□□□□ -0.9
LINC01554Q52M75 ADAM9-203ENST00000466936 2053 ntTSL 2 BASIC9.43□□□□□ -0.9
LINC01554Q52M75 PXYLP1-203ENST00000502783 2066 ntTSL 2 BASIC9.43□□□□□ -0.9
LINC01554Q52M75 MYLK-201ENST00000346322 5892 ntAPPRIS ALT2 TSL 5 BASIC9.43□□□□□ -0.9
LINC01554Q52M75 AIFM2-204ENST00000613322 3247 ntAPPRIS P1 TSL 5 BASIC9.43□□□□□ -0.9
LINC01554Q52M75 GCFC2-201ENST00000321027 4440 ntAPPRIS P1 TSL 1 (best) BASIC9.42□□□□□ -0.9
LINC01554Q52M75 AL161772.1-201ENST00000610494 4412 ntBASIC9.42□□□□□ -0.9
LINC01554Q52M75 ARID5A-203ENST00000454558 3079 ntTSL 1 (best) BASIC9.42□□□□□ -0.9
LINC01554Q52M75 CD55-205ENST00000367067 1843 ntAPPRIS ALT2 TSL 5 BASIC9.42□□□□□ -0.9
LINC01554Q52M75 MGRN1-203ENST00000415496 6405 ntAPPRIS ALT2 TSL 1 (best) BASIC9.42□□□□□ -0.9
LINC01554Q52M75 TM7SF2-201ENST00000279263 1722 ntAPPRIS P1 TSL 1 (best) BASIC9.42□□□□□ -0.9
LINC01554Q52M75 WWTR1-AS1-202ENST00000479752 1700 ntTSL 1 (best) BASIC9.42□□□□□ -0.9
LINC01554Q52M75 FAM98A-201ENST00000238823 2816 ntAPPRIS P1 TSL 1 (best) BASIC9.42□□□□□ -0.9
LINC01554Q52M75 CASR-202ENST00000498619 5009 ntTSL 1 (best) BASIC9.42□□□□□ -0.9
LINC01554Q52M75 CXCL16-203ENST00000574412 1668 ntAPPRIS P2 TSL 1 (best) BASIC9.42□□□□□ -0.9
LINC01554Q52M75 KCNG3-201ENST00000306078 3824 ntAPPRIS P3 TSL 1 (best) BASIC9.42□□□□□ -0.9
LINC01554Q52M75 TNIP1-220ENST00000610535 2726 ntTSL 5 BASIC9.42□□□□□ -0.9
LINC01554Q52M75 NUP98-201ENST00000324932 6973 ntAPPRIS P1 TSL 1 (best) BASIC9.42□□□□□ -0.9
LINC01554Q52M75 CEBPE-201ENST00000206513 1554 ntAPPRIS P1 TSL 1 (best) BASIC9.42□□□□□ -0.9
LINC01554Q52M75 DMTN-201ENST00000265800 2554 ntTSL 5 BASIC9.42□□□□□ -0.9
LINC01554Q52M75 DMTN-207ENST00000517305 2551 ntTSL 5 BASIC9.42□□□□□ -0.9
LINC01554Q52M75 MYB-201ENST00000316528 3571 ntTSL 5 BASIC9.42□□□□□ -0.9
LINC01554Q52M75 MYB-241ENST00000616088 3573 ntTSL 5 BASIC9.42□□□□□ -0.9
LINC01554Q52M75 TTLL8-201ENST00000266182 2505 ntAPPRIS ALT2 TSL 5 BASIC9.42□□□□□ -0.9
LINC01554Q52M75 RIMS1-213ENST00000517960 4428 ntTSL 5 BASIC9.42□□□□□ -0.9
LINC01554Q52M75 RIMS1-215ENST00000520567 4442 ntTSL 5 BASIC9.42□□□□□ -0.9
LINC01554Q52M75 SLC22A3-201ENST00000275300 3348 ntAPPRIS P1 TSL 1 (best) BASIC9.42□□□□□ -0.9
LINC01554Q52M75 P2RY6-202ENST00000393590 2398 ntAPPRIS P1 TSL 1 (best) BASIC9.42□□□□□ -0.9
LINC01554Q52M75 AKR7A2-201ENST00000235835 1362 ntAPPRIS P1 TSL 1 (best) BASIC9.42□□□□□ -0.9
LINC01554Q52M75 TSKS-202ENST00000358830 1367 ntAPPRIS ALT2 TSL 1 (best) BASIC9.42□□□□□ -0.9
LINC01554Q52M75 SMARCC2-201ENST00000267064 4076 ntAPPRIS P4 TSL 1 (best) BASIC9.42□□□□□ -0.9
LINC01554Q52M75 DIP2A-204ENST00000457905 3044 ntTSL 1 (best) BASIC9.42□□□□□ -0.9
LINC01554Q52M75 FOXP1-201ENST00000318779 843 ntTSL 1 (best) BASIC9.42□□□□□ -0.9
LINC01554Q52M75 UBE2C-202ENST00000335046 737 ntTSL 2 BASIC9.42□□□□□ -0.9
LINC01554Q52M75 TNFRSF6B-201ENST00000369996 1124 ntAPPRIS P1 TSL 1 (best) BASIC9.42□□□□□ -0.9
LINC01554Q52M75 ACYP2-202ENST00000394666 993 ntAPPRIS P1 TSL 1 (best) BASIC9.42□□□□□ -0.9
LINC01554Q52M75 HES6-206ENST00000409574 738 ntTSL 2 BASIC9.42□□□□□ -0.9
LINC01554Q52M75 WDR86-AS1-204ENST00000489632 751 ntTSL 3 BASIC9.42□□□□□ -0.9
LINC01554Q52M75 SSPN-204ENST00000535504 419 ntTSL 1 (best) BASIC9.42□□□□□ -0.9
LINC01554Q52M75 TRIR-202ENST00000588213 841 ntTSL 3 BASIC9.42□□□□□ -0.9
LINC01554Q52M75 AC018553.2-201ENST00000637770 1064 ntTSL 1 (best) BASIC9.42□□□□□ -0.9
LINC01554Q52M75 B4GAT1-201ENST00000311181 2072 ntAPPRIS P1 TSL 1 (best) BASIC9.42□□□□□ -0.9
LINC01554Q52M75 OLIG3-201ENST00000367734 2049 ntAPPRIS P1 BASIC9.42□□□□□ -0.9
LINC01554Q52M75 CD19-202ENST00000538922 1957 ntAPPRIS ALT2 TSL 5 BASIC9.42□□□□□ -0.9
LINC01554Q52M75 PARVG-205ENST00000422871 3462 ntAPPRIS P1 TSL 5 BASIC9.42□□□□□ -0.9
LINC01554Q52M75 DMRTB1-201ENST00000371445 1910 ntAPPRIS P1 TSL 1 (best) BASIC9.42□□□□□ -0.9
LINC01554Q52M75 AL590627.1-201ENST00000626603 1910 ntTSL 2 BASIC9.42□□□□□ -0.9
LINC01554Q52M75 PSD-201ENST00000020673 4183 ntAPPRIS P1 TSL 1 (best) BASIC9.42□□□□□ -0.9
LINC01554Q52M75 MAPK3-212ENST00000484663 2567 ntTSL 1 (best) BASIC9.42□□□□□ -0.9
LINC01554Q52M75 C12orf76-203ENST00000546651 1755 ntTSL 2 BASIC9.42□□□□□ -0.9
LINC01554Q52M75 PABPC4-204ENST00000372862 2470 ntTSL 5 BASIC9.42□□□□□ -0.9
LINC01554Q52M75 CBS-203ENST00000398158 2453 ntAPPRIS P1 TSL 1 (best) BASIC9.42□□□□□ -0.9
LINC01554Q52M75 MAP7D2-203ENST00000443379 2476 ntAPPRIS ALT2 TSL 2 BASIC9.42□□□□□ -0.9
LINC01554Q52M75 FDFT1-223ENST00000615631 2462 ntAPPRIS P1 TSL 5 BASIC9.42□□□□□ -0.9
LINC01554Q52M75 CBSL-206ENST00000624406 2453 ntAPPRIS P1 TSL 1 (best) BASIC9.42□□□□□ -0.9
LINC01554Q52M75 SMARCA4-214ENST00000589677 5181 ntAPPRIS ALT1 TSL 5 BASIC9.42□□□□□ -0.9
LINC01554Q52M75 SARDH-205ENST00000422262 2367 ntTSL 5 BASIC9.42□□□□□ -0.9
LINC01554Q52M75 TERF1-202ENST00000276603 1677 ntAPPRIS P4 TSL 1 (best) BASIC9.42□□□□□ -0.9
LINC01554Q52M75 CAPN5-205ENST00000529629 2333 ntAPPRIS P1 TSL 1 (best) BASIC9.42□□□□□ -0.9
LINC01554Q52M75 PLLP-205ENST00000613167 7578 ntTSL 5 BASIC9.42□□□□□ -0.9
LINC01554Q52M75 MMP11-201ENST00000215743 2291 ntAPPRIS P1 TSL 1 (best) BASIC9.42□□□□□ -0.9
LINC01554Q52M75 STT3B-201ENST00000295770 4248 ntAPPRIS P1 TSL 1 (best) BASIC9.42□□□□□ -0.9
LINC01554Q52M75 LCOR-202ENST00000356016 4834 ntAPPRIS P3 TSL 2 BASIC9.42□□□□□ -0.9
LINC01554Q52M75 CASC3-201ENST00000264645 4116 ntAPPRIS P1 TSL 1 (best) BASIC9.41□□□□□ -0.9
LINC01554Q52M75 POLD2-201ENST00000223361 1597 ntTSL 5 BASIC9.41□□□□□ -0.9
LINC01554Q52M75 RAB31-207ENST00000578921 4055 ntAPPRIS P1 TSL 1 (best) BASIC9.41□□□□□ -0.9
LINC01554Q52M75 SLC25A23-202ENST00000301454 3425 ntAPPRIS P1 TSL 1 (best) BASIC9.41□□□□□ -0.9
LINC01554Q52M75 ASB6-202ENST00000277459 2180 ntTSL 1 (best) BASIC9.41□□□□□ -0.9
LINC01554Q52M75 SEPT9-237ENST00000591198 2160 ntTSL 2 BASIC9.41□□□□□ -0.9
LINC01554Q52M75 MAD1L1-202ENST00000399654 2762 ntAPPRIS P1 TSL 5 BASIC9.41□□□□□ -0.9
LINC01554Q52M75 MFSD3-201ENST00000301327 1548 ntAPPRIS P1 TSL 1 (best) BASIC9.41□□□□□ -0.9
Retrieved 100 of 98,524 protein–RNA pairs in 30.5 ms