Protein–RNA interactions for Protein: Q15878

CACNA1E, Voltage-dependent R-type calcium channel subunit alpha-1E, humanhuman

Predictions only

Length 2,313 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1EQ15878 NAT14-202ENST00000587400 416 ntTSL 5 BASIC18.23■□□□□ 0.51
CACNA1EQ15878 LINC01711-201ENST00000598340 967 ntBASIC18.23■□□□□ 0.51
CACNA1EQ15878 TST-204ENST00000622841 1105 ntAPPRIS P1 TSL 5 BASIC18.23■□□□□ 0.51
CACNA1EQ15878 MYO1C-203ENST00000438665 4898 ntAPPRIS ALT1 TSL 5 BASIC18.23■□□□□ 0.51
CACNA1EQ15878 LINC02028-204ENST00000449350 1419 ntTSL 3 BASIC18.23■□□□□ 0.51
CACNA1EQ15878 EXOSC3-201ENST00000327304 1806 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
CACNA1EQ15878 WNT10B-202ENST00000403957 1817 ntTSL 5 BASIC18.23■□□□□ 0.51
CACNA1EQ15878 SLC6A18-201ENST00000324642 2121 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
CACNA1EQ15878 GRK2-201ENST00000308595 3466 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
CACNA1EQ15878 FBXL16-203ENST00000562563 2257 ntTSL 2 BASIC18.23■□□□□ 0.51
CACNA1EQ15878 AL365232.1-201ENST00000423730 1636 ntAPPRIS P1 TSL 5 BASIC18.23■□□□□ 0.51
CACNA1EQ15878 PFN2-203ENST00000452853 1780 ntAPPRIS ALT1 TSL 1 (best) BASIC18.23■□□□□ 0.51
CACNA1EQ15878 ZNF843-203ENST00000618063 1765 ntAPPRIS P2 TSL 1 (best) BASIC18.23■□□□□ 0.51
CACNA1EQ15878 S1PR5-201ENST00000333430 2341 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
CACNA1EQ15878 NSUN5P1-202ENST00000421140 1535 ntBASIC18.23■□□□□ 0.51
CACNA1EQ15878 NSUN5P2-203ENST00000457352 1529 ntBASIC18.23■□□□□ 0.51
CACNA1EQ15878 CCDC134-201ENST00000255784 1270 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
CACNA1EQ15878 STX8-201ENST00000306357 1246 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
CACNA1EQ15878 HYI-201ENST00000372425 1265 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
CACNA1EQ15878 ARMC12-202ENST00000373866 1254 ntAPPRIS P1 TSL 3 BASIC18.23■□□□□ 0.51
CACNA1EQ15878 C2orf82-202ENST00000409230 663 ntAPPRIS P2 TSL 3 BASIC18.23■□□□□ 0.51
CACNA1EQ15878 SCRN1-203ENST00000409570 535 ntTSL 4 BASIC18.23■□□□□ 0.51
CACNA1EQ15878 HOXB-AS2-201ENST00000464382 845 ntTSL 4 BASIC18.23■□□□□ 0.51
CACNA1EQ15878 BOC-211ENST00000484034 1286 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
CACNA1EQ15878 AF238378.1-201ENST00000526806 358 ntBASIC18.23■□□□□ 0.51
CACNA1EQ15878 SRSF1-209ENST00000585096 568 ntTSL 4 BASIC18.23■□□□□ 0.51
CACNA1EQ15878 AC099336.1-202ENST00000602961 463 ntBASIC18.23■□□□□ 0.51
CACNA1EQ15878 CXorf40B-205ENST00000462691 1440 ntAPPRIS ALT1 TSL 3 BASIC18.23■□□□□ 0.51
CACNA1EQ15878 CFP-203ENST00000396992 1592 ntAPPRIS P2 TSL 1 (best) BASIC18.23■□□□□ 0.51
CACNA1EQ15878 NECAB3-202ENST00000375238 1942 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
CACNA1EQ15878 ADAP1-218ENST00000617043 1946 ntTSL 2 BASIC18.23■□□□□ 0.51
CACNA1EQ15878 PGAM1-201ENST00000334828 1830 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
CACNA1EQ15878 TMC6-201ENST00000306591 1681 ntTSL 5 BASIC18.22■□□□□ 0.51
CACNA1EQ15878 CYP51A1P1-201ENST00000492267 1507 ntBASIC18.22■□□□□ 0.51
CACNA1EQ15878 DGUOK-201ENST00000264093 1144 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
CACNA1EQ15878 TPM1-203ENST00000317516 738 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
CACNA1EQ15878 DGUOK-202ENST00000348222 880 ntTSL 2 BASIC18.22■□□□□ 0.51
CACNA1EQ15878 C1QC-203ENST00000374640 1163 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
CACNA1EQ15878 SERF1B-202ENST00000380751 703 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
CACNA1EQ15878 FIGNL1-207ENST00000435566 593 ntTSL 4 BASIC18.22■□□□□ 0.51
CACNA1EQ15878 TPM1-218ENST00000559281 851 ntTSL 5 BASIC18.22■□□□□ 0.51
CACNA1EQ15878 ANAPC11-204ENST00000571024 668 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
CACNA1EQ15878 ANAPC11-218ENST00000582222 523 ntTSL 2 BASIC18.22■□□□□ 0.51
CACNA1EQ15878 MALAT1-215ENST00000619449 794 ntTSL 3 BASIC18.22■□□□□ 0.51
CACNA1EQ15878 DGUOK-208ENST00000629438 1029 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
CACNA1EQ15878 TRIM13-206ENST00000457662 1489 ntAPPRIS P3 TSL 1 (best) BASIC18.22■□□□□ 0.51
CACNA1EQ15878 WFIKKN1-201ENST00000319070 2028 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
CACNA1EQ15878 APBB3-203ENST00000357560 2218 ntAPPRIS P3 TSL 5 BASIC18.22■□□□□ 0.51
CACNA1EQ15878 WNT6-201ENST00000233948 1703 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
CACNA1EQ15878 T-202ENST00000366871 2250 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
CACNA1EQ15878 ASB16-201ENST00000293414 2139 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
CACNA1EQ15878 PLEKHM2-202ENST00000375799 4122 ntAPPRIS P2 TSL 1 (best) BASIC18.22■□□□□ 0.51
CACNA1EQ15878 CIRBP-202ENST00000413636 1606 ntTSL 2 BASIC18.22■□□□□ 0.51
CACNA1EQ15878 RNASEH2A-201ENST00000221486 1165 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
CACNA1EQ15878 NDUFB9-201ENST00000276689 711 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
CACNA1EQ15878 PCAT7-201ENST00000452148 1164 ntTSL 2 BASIC18.22■□□□□ 0.51
CACNA1EQ15878 PPIE-208ENST00000470213 927 ntTSL 3 BASIC18.22■□□□□ 0.51
CACNA1EQ15878 SUSD1-204ENST00000374270 3124 ntAPPRIS P3 TSL 1 (best) BASIC18.22■□□□□ 0.51
CACNA1EQ15878 VIPR2-202ENST00000377633 1491 ntTSL 2 BASIC18.22■□□□□ 0.51
CACNA1EQ15878 PCED1A-201ENST00000356872 1706 ntTSL 2 BASIC18.22■□□□□ 0.51
CACNA1EQ15878 CAMK2B-203ENST00000347193 1577 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
CACNA1EQ15878 GABRD-201ENST00000378585 1961 ntAPPRIS P2 TSL 1 (best) BASIC18.21■□□□□ 0.51
CACNA1EQ15878 PHOSPHO1-202ENST00000413580 2173 ntTSL 2 BASIC18.21■□□□□ 0.51
CACNA1EQ15878 TMEM189-201ENST00000371650 2222 ntAPPRIS ALT1 TSL 1 (best) BASIC18.21■□□□□ 0.51
CACNA1EQ15878 AKT2-210ENST00000424901 5170 ntTSL 5 BASIC18.21■□□□□ 0.51
CACNA1EQ15878 RDH13-203ENST00000415061 1871 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
CACNA1EQ15878 SLC26A11-212ENST00000572725 1862 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
CACNA1EQ15878 MOSPD3-201ENST00000223054 1053 ntAPPRIS P1 TSL 2 BASIC18.21■□□□□ 0.51
CACNA1EQ15878 PRMT2-201ENST00000291705 1011 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
CACNA1EQ15878 EMD-201ENST00000369835 966 ntTSL 3 BASIC18.21■□□□□ 0.51
CACNA1EQ15878 MSRB1-202ENST00000399753 847 ntTSL 3 BASIC18.21■□□□□ 0.51
CACNA1EQ15878 POLD2P1-201ENST00000511220 997 ntBASIC18.21■□□□□ 0.51
CACNA1EQ15878 RPL27-206ENST00000589913 697 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
CACNA1EQ15878 AC107959.1-202ENST00000502083 1945 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
CACNA1EQ15878 RBPMS-203ENST00000339877 1341 ntAPPRIS ALT1 TSL 1 (best) BASIC18.21■□□□□ 0.51
CACNA1EQ15878 MAGI2-217ENST00000629359 6704 ntTSL 5 BASIC18.21■□□□□ 0.51
CACNA1EQ15878 MAP3K14-AS1-203ENST00000585780 2475 ntTSL 2 BASIC18.21■□□□□ 0.51
CACNA1EQ15878 PKD1P6-201ENST00000343738 4769 ntBASIC18.21■□□□□ 0.51
CACNA1EQ15878 SLC25A3-201ENST00000188376 1909 ntAPPRIS ALT1 TSL 1 (best) BASIC18.21■□□□□ 0.51
CACNA1EQ15878 GUCA1A-205ENST00000541991 1921 ntTSL 5 BASIC18.21■□□□□ 0.51
CACNA1EQ15878 AC125437.2-201ENST00000625180 2167 ntBASIC18.21■□□□□ 0.51
CACNA1EQ15878 MRGPRF-AS1-201ENST00000538407 1490 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
CACNA1EQ15878 PWWP2AP1-201ENST00000429776 2273 ntBASIC18.21■□□□□ 0.51
CACNA1EQ15878 RCC2P3-201ENST00000418112 1537 ntBASIC18.21■□□□□ 0.51
CACNA1EQ15878 CCS-201ENST00000310190 942 ntTSL 5 BASIC18.21■□□□□ 0.51
CACNA1EQ15878 GPRC5C-201ENST00000342648 1273 ntTSL 5 BASIC18.21■□□□□ 0.51
CACNA1EQ15878 PHOSPHO2-201ENST00000359744 1125 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
CACNA1EQ15878 HMGN1P19-201ENST00000436976 333 ntBASIC18.21■□□□□ 0.51
CACNA1EQ15878 AL449423.1-201ENST00000578935 435 ntTSL 3 BASIC18.21■□□□□ 0.51
CACNA1EQ15878 AC006333.2-201ENST00000607957 2099 ntBASIC18.21■□□□□ 0.51
CACNA1EQ15878 NR1H2-211ENST00000599105 1830 ntAPPRIS ALT2 TSL 5 BASIC18.21■□□□□ 0.51
CACNA1EQ15878 TUBA3C-201ENST00000400113 1551 ntAPPRIS P1 TSL 5 BASIC18.21■□□□□ 0.5
CACNA1EQ15878 SETD3-201ENST00000329331 1330 ntTSL 1 (best) BASIC18.21■□□□□ 0.5
CACNA1EQ15878 PCDHAC2-203ENST00000615316 3011 ntBASIC18.2■□□□□ 0.5
CACNA1EQ15878 FAM217A-208ENST00000639338 1929 ntTSL 5 BASIC18.2■□□□□ 0.5
CACNA1EQ15878 HDGFL2-208ENST00000616600 2281 ntAPPRIS P3 TSL 1 (best) BASIC18.2■□□□□ 0.5
CACNA1EQ15878 POMC-204ENST00000405623 1426 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
CACNA1EQ15878 TNNI3-201ENST00000344887 840 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
CACNA1EQ15878 AL031284.1-201ENST00000419297 478 ntBASIC18.2■□□□□ 0.5
CACNA1EQ15878 AC139749.1-201ENST00000534584 1094 ntTSL 3 BASIC18.2■□□□□ 0.5
Retrieved 100 of 98,524 protein–RNA pairs in 18.3 ms