Protein–RNA interactions for Protein: P58418

CLRN1, Clarin-1, humanhuman

Predictions only

Length 232 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLRN1P58418 PCDHA5-202ENST00000529859 5218 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
CLRN1P58418 CCDC27-201ENST00000294600 2176 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
CLRN1P58418 PODXL2-201ENST00000342480 2186 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
CLRN1P58418 SYNGR1-201ENST00000216155 497 ntTSL 3 BASIC16.77■□□□□ 0.28
CLRN1P58418 MSGN1-201ENST00000281047 606 ntAPPRIS P1 BASIC16.77■□□□□ 0.28
CLRN1P58418 DUSP23-203ENST00000368109 729 ntAPPRIS P1 TSL 2 BASIC16.77■□□□□ 0.28
CLRN1P58418 AC116562.2-201ENST00000507042 360 ntBASIC16.77■□□□□ 0.28
CLRN1P58418 TMEM263-203ENST00000547242 811 ntAPPRIS P1 TSL 2 BASIC16.77■□□□□ 0.28
CLRN1P58418 ZNF667-AS1-208ENST00000594783 475 ntTSL 3 BASIC16.77■□□□□ 0.28
CLRN1P58418 AC026471.5-201ENST00000615068 467 ntBASIC16.77■□□□□ 0.28
CLRN1P58418 HSDL1-202ENST00000434463 1493 ntTSL 2 BASIC16.77■□□□□ 0.28
CLRN1P58418 MYBL2-202ENST00000396863 2704 ntTSL 2 BASIC16.77■□□□□ 0.28
CLRN1P58418 IL4I1-202ENST00000391826 1863 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.27
CLRN1P58418 PCCB-208ENST00000468777 1877 ntAPPRIS ALT2 TSL 3 BASIC16.77■□□□□ 0.27
CLRN1P58418 GCDH-216ENST00000591470 1867 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
CLRN1P58418 CDK5R1-201ENST00000313401 4325 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
CLRN1P58418 TRAK1-209ENST00000487159 5536 ntAPPRIS ALT2 TSL 5 BASIC16.77■□□□□ 0.27
CLRN1P58418 TMEM91-210ENST00000542945 1610 ntTSL 2 BASIC16.77■□□□□ 0.27
CLRN1P58418 AL138781.2-201ENST00000617896 1843 ntBASIC16.77■□□□□ 0.27
CLRN1P58418 EDN3-204ENST00000371028 2397 ntAPPRIS P4 TSL 5 BASIC16.77■□□□□ 0.27
CLRN1P58418 FIP1L1-202ENST00000337488 2198 ntTSL 1 (best) BASIC16.77■□□□□ 0.27
CLRN1P58418 FIP1L1-203ENST00000358575 2180 ntAPPRIS P4 TSL 2 BASIC16.77■□□□□ 0.27
CLRN1P58418 NOTCH2NL-204ENST00000579793 1954 ntAPPRIS ALT2 TSL 2 BASIC16.77■□□□□ 0.27
CLRN1P58418 MFSD10-202ENST00000355443 1753 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
CLRN1P58418 AL031598.1-201ENST00000561511 1773 ntBASIC16.77■□□□□ 0.27
CLRN1P58418 NUTM2D-201ENST00000381697 3290 ntAPPRIS P5 TSL 1 (best) BASIC16.76■□□□□ 0.27
CLRN1P58418 RNF167-205ENST00000571816 1728 ntAPPRIS P3 TSL 5 BASIC16.76■□□□□ 0.27
CLRN1P58418 CD151-201ENST00000322008 1548 ntAPPRIS P2 TSL 1 (best) BASIC16.76■□□□□ 0.27
CLRN1P58418 WRNIP1-202ENST00000380769 3239 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
CLRN1P58418 RBP4-202ENST00000371467 1314 ntAPPRIS P1 TSL 5 BASIC16.76■□□□□ 0.27
CLRN1P58418 TMEM129-202ENST00000382936 2810 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
CLRN1P58418 PRR23B-201ENST00000329447 1896 ntAPPRIS P1 BASIC16.76■□□□□ 0.27
CLRN1P58418 ENOPH1-201ENST00000273920 2025 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
CLRN1P58418 PPP2R5A-201ENST00000261461 3128 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
CLRN1P58418 GPR42-201ENST00000454971 1804 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
CLRN1P58418 HEXDC-203ENST00000577944 1820 ntTSL 5 BASIC16.76■□□□□ 0.27
CLRN1P58418 PIN1-201ENST00000247970 997 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
CLRN1P58418 NTAN1-201ENST00000287706 1204 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
CLRN1P58418 MDK-201ENST00000359803 985 ntAPPRIS P2 TSL 2 BASIC16.76■□□□□ 0.27
CLRN1P58418 NKAIN4-201ENST00000370307 793 ntTSL 5 BASIC16.76■□□□□ 0.27
CLRN1P58418 BCL7B-206ENST00000455335 985 ntTSL 3 BASIC16.76■□□□□ 0.27
CLRN1P58418 DBNL-214ENST00000456905 1241 ntTSL 2 BASIC16.76■□□□□ 0.27
CLRN1P58418 AC092718.1-201ENST00000501068 1088 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
CLRN1P58418 PAIP2-208ENST00000511706 468 ntTSL 5 BASIC16.76■□□□□ 0.27
CLRN1P58418 AC093752.1-201ENST00000511950 605 ntTSL 4 BASIC16.76■□□□□ 0.27
CLRN1P58418 AP002433.1-201ENST00000525548 964 ntTSL 3 BASIC16.76■□□□□ 0.27
CLRN1P58418 EIF3J-AS1-205ENST00000560750 1093 ntTSL 3 BASIC16.76■□□□□ 0.27
CLRN1P58418 TNFRSF12A-206ENST00000575124 1133 ntTSL 2 BASIC16.76■□□□□ 0.27
CLRN1P58418 CYGB-204ENST00000589342 815 ntTSL 3 BASIC16.76■□□□□ 0.27
CLRN1P58418 KANK3-205ENST00000610351 1191 ntTSL 5 BASIC16.76■□□□□ 0.27
CLRN1P58418 LDHD-202ENST00000450168 1966 ntAPPRIS ALT2 TSL 1 (best) BASIC16.76■□□□□ 0.27
CLRN1P58418 KRT8P3-201ENST00000519669 1449 ntBASIC16.76■□□□□ 0.27
CLRN1P58418 SLC29A2-201ENST00000311161 2262 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
CLRN1P58418 COX20-203ENST00000411948 2631 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
CLRN1P58418 NLGN2-204ENST00000575301 4374 ntAPPRIS P1 TSL 5 BASIC16.76■□□□□ 0.27
CLRN1P58418 CDC14B-208ENST00000463569 1734 ntAPPRIS ALT2 TSL 5 BASIC16.76■□□□□ 0.27
CLRN1P58418 SH3GLB2-202ENST00000372559 1365 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
CLRN1P58418 AHRR-204ENST00000506456 2350 ntTSL 2 BASIC16.75■□□□□ 0.27
CLRN1P58418 KLF16-201ENST00000250916 2890 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
CLRN1P58418 ZNF787-202ENST00000587279 1657 ntTSL 2 BASIC16.75■□□□□ 0.27
CLRN1P58418 ACBD4-215ENST00000592162 1684 ntTSL 5 BASIC16.75■□□□□ 0.27
CLRN1P58418 SEPT2-203ENST00000391971 3315 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
CLRN1P58418 FBXL20-202ENST00000394294 2309 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
CLRN1P58418 QPCTL-202ENST00000366382 1814 ntTSL 2 BASIC16.75■□□□□ 0.27
CLRN1P58418 TCP11-209ENST00000444780 1841 ntAPPRIS ALT2 TSL 2 BASIC16.75■□□□□ 0.27
CLRN1P58418 ZNF768-202ENST00000562803 1999 ntAPPRIS ALT2 TSL 3 BASIC16.75■□□□□ 0.27
CLRN1P58418 RPRM-201ENST00000325926 1471 ntAPPRIS P1 BASIC16.75■□□□□ 0.27
CLRN1P58418 TEPSIN-201ENST00000300714 2287 ntAPPRIS P2 TSL 1 (best) BASIC16.75■□□□□ 0.27
CLRN1P58418 FAM118A-202ENST00000405673 1612 ntTSL 5 BASIC16.75■□□□□ 0.27
CLRN1P58418 AD000671.2-201ENST00000589807 1925 ntAPPRIS P1 TSL 2 BASIC16.75■□□□□ 0.27
CLRN1P58418 TCEAL6-202ENST00000372774 1106 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
CLRN1P58418 AL390728.5-201ENST00000428687 706 ntTSL 3 BASIC16.75■□□□□ 0.27
CLRN1P58418 MRPL36-202ENST00000505059 610 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
CLRN1P58418 AC097488.1-201ENST00000507834 756 ntBASIC16.75■□□□□ 0.27
CLRN1P58418 TGIF1-222ENST00000577543 729 ntTSL 3 BASIC16.75■□□□□ 0.27
CLRN1P58418 CIRBP-217ENST00000588230 1013 ntTSL 5 BASIC16.75■□□□□ 0.27
CLRN1P58418 TYROBP-209ENST00000589517 415 ntAPPRIS ALT1 TSL 1 (best) BASIC16.75■□□□□ 0.27
CLRN1P58418 L34079.3-201ENST00000600242 546 ntTSL 4 BASIC16.75■□□□□ 0.27
CLRN1P58418 REXO1L10P-201ENST00000615707 1290 ntBASIC16.75■□□□□ 0.27
CLRN1P58418 REXO1L12P-201ENST00000622156 912 ntBASIC16.75■□□□□ 0.27
CLRN1P58418 MARK4-211ENST00000622871 1147 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
CLRN1P58418 ASRGL1-211ENST00000628829 1161 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
CLRN1P58418 FAM213A-206ENST00000615554 2213 ntAPPRIS P1 TSL 5 BASIC16.75■□□□□ 0.27
CLRN1P58418 NUP153-202ENST00000537253 6030 ntAPPRIS ALT2 TSL 2 BASIC16.75■□□□□ 0.27
CLRN1P58418 SPAG1-206ENST00000520643 1723 ntTSL 2 BASIC16.75■□□□□ 0.27
CLRN1P58418 LRCH3-207ENST00000441090 2034 ntTSL 2 BASIC16.75■□□□□ 0.27
CLRN1P58418 CRYBB2P1-202ENST00000382734 1364 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
CLRN1P58418 JAKMIP1-208ENST00000637373 1362 ntTSL 5 BASIC16.75■□□□□ 0.27
CLRN1P58418 DIO1-201ENST00000322679 1658 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
CLRN1P58418 DIO1-217ENST00000617230 1656 ntTSL 5 BASIC16.75■□□□□ 0.27
CLRN1P58418 C19orf25-203ENST00000585675 1837 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
CLRN1P58418 GHDC-212ENST00000593209 1827 ntTSL 5 BASIC16.75■□□□□ 0.27
CLRN1P58418 CDC14B-203ENST00000375242 2965 ntTSL 2 BASIC16.74■□□□□ 0.27
CLRN1P58418 CEP78-201ENST00000277082 2542 ntAPPRIS ALT2 TSL 2 BASIC16.74■□□□□ 0.27
CLRN1P58418 TMEM179-201ENST00000341595 2513 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
CLRN1P58418 FDFT1-226ENST00000623368 2368 ntTSL 2 BASIC16.74■□□□□ 0.27
CLRN1P58418 FBXO24-202ENST00000427939 2087 ntTSL 2 BASIC16.74■□□□□ 0.27
CLRN1P58418 BAIAP2-204ENST00000428708 2095 ntAPPRIS ALT2 TSL 1 (best) BASIC16.74■□□□□ 0.27
CLRN1P58418 GPR83-202ENST00000539203 1909 ntTSL 5 BASIC16.74■□□□□ 0.27
CLRN1P58418 ACVR1B-203ENST00000426655 1782 ntTSL 2 BASIC16.74■□□□□ 0.27
Retrieved 100 of 98,524 protein–RNA pairs in 30.4 ms