Protein–RNA interactions for Protein: P56589

PEX3, Peroxisomal biogenesis factor 3, humanhuman

Predictions only

Length 373 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PEX3P56589 ANKRD13D-201ENST00000308440 2219 ntTSL 2 BASIC20.65■□□□□ 0.9
PEX3P56589 CPZ-201ENST00000315782 2136 ntAPPRIS P3 TSL 1 (best) BASIC20.65■□□□□ 0.9
PEX3P56589 CDK18-217ENST00000506784 2143 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
PEX3P56589 TBC1D10C-201ENST00000312390 1497 ntTSL 5 BASIC20.65■□□□□ 0.9
PEX3P56589 PTGES2-214ENST00000617202 1344 ntTSL 5 BASIC20.65■□□□□ 0.9
PEX3P56589 CD7-201ENST00000312648 1281 ntAPPRIS P2 TSL 1 (best) BASIC20.65■□□□□ 0.9
PEX3P56589 LINC01381-201ENST00000431650 466 ntTSL 3 BASIC20.65■□□□□ 0.9
PEX3P56589 LINC01063-201ENST00000441644 348 ntTSL 3 BASIC20.65■□□□□ 0.9
PEX3P56589 BX664615.1-201ENST00000443558 458 ntBASIC20.65■□□□□ 0.9
PEX3P56589 RPL39L-203ENST00000455270 653 ntAPPRIS P1 TSL 2 BASIC20.65■□□□□ 0.9
PEX3P56589 RARRES2-205ENST00000482669 563 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
PEX3P56589 CMTM3-210ENST00000565666 769 ntTSL 3 BASIC20.65■□□□□ 0.9
PEX3P56589 RBM42-202ENST00000586618 771 ntTSL 3 BASIC20.65■□□□□ 0.9
PEX3P56589 ATP5D-207ENST00000591660 637 ntAPPRIS P1 TSL 3 BASIC20.65■□□□□ 0.9
PEX3P56589 OBP2B-205ENST00000618116 961 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
PEX3P56589 RNF187-203ENST00000639044 708 ntAPPRIS P2 TSL 1 (best) BASIC20.65■□□□□ 0.9
PEX3P56589 FOXP4-205ENST00000409208 3341 ntAPPRIS P1 TSL 5 BASIC20.65■□□□□ 0.9
PEX3P56589 KSR1-205ENST00000509603 2731 ntAPPRIS ALT2 TSL 5 BASIC20.65■□□□□ 0.9
PEX3P56589 EPHA10-202ENST00000373048 5425 ntAPPRIS P2 TSL 5 BASIC20.65■□□□□ 0.9
PEX3P56589 TSGA10IP-203ENST00000532620 1925 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
PEX3P56589 DIO3OS-212ENST00000557661 1937 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
PEX3P56589 GHDC-212ENST00000593209 1827 ntTSL 5 BASIC20.64■□□□□ 0.9
PEX3P56589 AL357033.4-201ENST00000617703 1807 ntBASIC20.64■□□□□ 0.9
PEX3P56589 TWF1-201ENST00000395510 3045 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
PEX3P56589 FBXW9-203ENST00000587955 1437 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
PEX3P56589 RNPEPL1-201ENST00000270357 5658 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
PEX3P56589 SMPD1-203ENST00000527275 2188 ntAPPRIS P3 TSL 2 BASIC20.64■□□□□ 0.89
PEX3P56589 UPK3B-201ENST00000257632 1296 ntAPPRIS P5 TSL 2 BASIC20.64■□□□□ 0.89
PEX3P56589 BUD23-201ENST00000265758 1230 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
PEX3P56589 OCIAD2-201ENST00000273860 636 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
PEX3P56589 TMEM64-204ENST00000519519 873 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
PEX3P56589 OCIAD2-210ENST00000620187 697 ntTSL 3 BASIC20.64■□□□□ 0.89
PEX3P56589 AC006011.2-201ENST00000621313 1158 ntBASIC20.64■□□□□ 0.89
PEX3P56589 ISOC2-201ENST00000085068 1122 ntTSL 2 BASIC20.64■□□□□ 0.89
PEX3P56589 DACT2-204ENST00000610183 2088 ntAPPRIS ALT2 TSL 1 (best) BASIC20.64■□□□□ 0.89
PEX3P56589 ARRDC2-201ENST00000222250 2503 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
PEX3P56589 ADAMTS10-205ENST00000595838 2458 ntTSL 2 BASIC20.64■□□□□ 0.89
PEX3P56589 IDH3G-202ENST00000370092 1712 ntTSL 5 BASIC20.64■□□□□ 0.89
PEX3P56589 AHCYL1-203ENST00000393614 4313 ntTSL 2 BASIC20.64■□□□□ 0.89
PEX3P56589 DRD5-201ENST00000304374 2330 ntAPPRIS P1 BASIC20.64■□□□□ 0.89
PEX3P56589 RNF165-205ENST00000588679 2904 ntBASIC20.64■□□□□ 0.89
PEX3P56589 WIPI1-202ENST00000546360 1575 ntTSL 2 BASIC20.63■□□□□ 0.89
PEX3P56589 TULP1-208ENST00000614066 2084 ntAPPRIS ALT2 TSL 5 BASIC20.63■□□□□ 0.89
PEX3P56589 LMLN-204ENST00000420910 2423 ntAPPRIS P2 TSL 1 (best) BASIC20.63■□□□□ 0.89
PEX3P56589 EIF5A-204ENST00000416016 1336 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
PEX3P56589 ZNF398-202ENST00000475153 2860 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
PEX3P56589 DGCR6-201ENST00000331444 1214 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
PEX3P56589 ROMO1-202ENST00000374072 350 ntTSL 5 BASIC20.63■□□□□ 0.89
PEX3P56589 MIR564-202ENST00000385049 94 ntBASIC20.63■□□□□ 0.89
PEX3P56589 LINC01534-202ENST00000433232 554 ntTSL 3 BASIC20.63■□□□□ 0.89
PEX3P56589 AC104076.2-201ENST00000448912 469 ntBASIC20.63■□□□□ 0.89
PEX3P56589 NDUFV2-207ENST00000497577 868 ntTSL 2 BASIC20.63■□□□□ 0.89
PEX3P56589 AC139887.4-201ENST00000607877 719 ntBASIC20.63■□□□□ 0.89
PEX3P56589 C2CD2-202ENST00000380486 6345 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
PEX3P56589 LAMP1-201ENST00000332556 2699 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
PEX3P56589 ZNF655-202ENST00000320583 1601 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
PEX3P56589 SEMA3D-202ENST00000444867 1605 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
PEX3P56589 SUDS3-204ENST00000543473 4897 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
PEX3P56589 DOC2A-209ENST00000564979 1630 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
PEX3P56589 FAM160A2-201ENST00000265978 3481 ntAPPRIS P3 TSL 1 (best) BASIC20.63■□□□□ 0.89
PEX3P56589 EIF3B-202ENST00000397011 2966 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
PEX3P56589 ZAR1L-202ENST00000533490 1564 ntAPPRIS P1 TSL 5 BASIC20.63■□□□□ 0.89
PEX3P56589 HOXC13-201ENST00000243056 2423 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
PEX3P56589 FBXO31-201ENST00000311635 5934 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
PEX3P56589 EPHX4-201ENST00000370383 1437 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
PEX3P56589 EXOSC3-201ENST00000327304 1806 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
PEX3P56589 PHKA1-204ENST00000373545 6173 ntTSL 5 BASIC20.62■□□□□ 0.89
PEX3P56589 REPS1-203ENST00000409812 2511 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
PEX3P56589 EGFL7-203ENST00000371699 2125 ntAPPRIS P1 TSL 2 BASIC20.62■□□□□ 0.89
PEX3P56589 TOX2-205ENST00000423191 1709 ntTSL 2 BASIC20.62■□□□□ 0.89
PEX3P56589 FKBP3-202ENST00000396062 1346 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
PEX3P56589 PPP4C-202ENST00000561610 1333 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
PEX3P56589 SEPT8-216ENST00000620483 4335 ntTSL 5 BASIC20.62■□□□□ 0.89
PEX3P56589 CD2AP-201ENST00000359314 5412 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
PEX3P56589 AZU1-201ENST00000233997 908 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
PEX3P56589 AC117947.1-201ENST00000427448 529 ntBASIC20.62■□□□□ 0.89
PEX3P56589 AC103564.1-201ENST00000437330 562 ntTSL 5 BASIC20.62■□□□□ 0.89
PEX3P56589 MUC1-212ENST00000457295 1161 ntAPPRIS ALT2 TSL 2 BASIC20.62■□□□□ 0.89
PEX3P56589 COX11P1-201ENST00000489116 835 ntBASIC20.62■□□□□ 0.89
PEX3P56589 AC126696.3-202ENST00000570159 553 ntTSL 5 BASIC20.62■□□□□ 0.89
PEX3P56589 AL023973.1-201ENST00000624619 620 ntBASIC20.62■□□□□ 0.89
PEX3P56589 MB21D1-202ENST00000370318 1917 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
PEX3P56589 AC140125.2-201ENST00000502515 1517 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
PEX3P56589 EWSR1-208ENST00000414183 2189 ntAPPRIS P4 TSL 2 BASIC20.62■□□□□ 0.89
PEX3P56589 RASSF7-205ENST00000454668 1450 ntAPPRIS ALT2 TSL 1 (best) BASIC20.62■□□□□ 0.89
PEX3P56589 SNAI3-AS1-205ENST00000568633 2096 ntBASIC20.62■□□□□ 0.89
PEX3P56589 GALNT13-201ENST00000392825 5536 ntAPPRIS P1 TSL 2 BASIC20.61■□□□□ 0.89
PEX3P56589 KANSL1L-203ENST00000418791 3562 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
PEX3P56589 EDEM1-204ENST00000445686 1363 ntTSL 2 BASIC20.61■□□□□ 0.89
PEX3P56589 TNFSF9-201ENST00000245817 1665 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
PEX3P56589 CASC2-205ENST00000454781 2216 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
PEX3P56589 FGF8-201ENST00000320185 799 ntAPPRIS P4 TSL 1 (best) BASIC20.61■□□□□ 0.89
PEX3P56589 CDHR4-201ENST00000343366 1188 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
PEX3P56589 SLC12A4-202ENST00000422611 4670 ntTSL 2 BASIC20.61■□□□□ 0.89
PEX3P56589 ELP6-205ENST00000439305 880 ntTSL 2 BASIC20.61■□□□□ 0.89
PEX3P56589 AC027796.4-201ENST00000575741 874 ntTSL 5 BASIC20.61■□□□□ 0.89
PEX3P56589 CYB561D2-210ENST00000607121 1004 ntTSL 2 BASIC20.61■□□□□ 0.89
PEX3P56589 WDSUB1-203ENST00000392796 1812 ntAPPRIS P1 TSL 2 BASIC20.61■□□□□ 0.89
PEX3P56589 BX323043.1-201ENST00000641006 1765 ntBASIC20.61■□□□□ 0.89
PEX3P56589 FOXD2-201ENST00000334793 4675 ntAPPRIS P1 BASIC20.61■□□□□ 0.89
Retrieved 100 of 98,524 protein–RNA pairs in 31.6 ms