Protein–RNA interactions for Protein: P55286

CDH8, Cadherin-8, humanhuman

Predictions only

Length 799 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH8P55286 CIRBP-207ENST00000586472 1303 ntAPPRIS P3 TSL 3 BASIC20■□□□□ 0.79
CDH8P55286 PTGES2-214ENST00000617202 1344 ntTSL 5 BASIC20■□□□□ 0.79
CDH8P55286 SORCS2-203ENST00000507866 6152 ntAPPRIS P2 TSL 1 (best) BASIC20■□□□□ 0.79
CDH8P55286 WIPI1-202ENST00000546360 1575 ntTSL 2 BASIC20■□□□□ 0.79
CDH8P55286 KHNYN-206ENST00000556842 2443 ntAPPRIS P1 TSL 2 BASIC20■□□□□ 0.79
CDH8P55286 EXOSC3-201ENST00000327304 1806 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
CDH8P55286 RIMBP3-201ENST00000619918 6105 ntAPPRIS P1 BASIC19.99■□□□□ 0.79
CDH8P55286 NR1H2-202ENST00000411902 1466 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
CDH8P55286 CBSL-210ENST00000624934 1992 ntTSL 5 BASIC19.99■□□□□ 0.79
CDH8P55286 SYBU-232ENST00000533171 2498 ntAPPRIS ALT2 TSL 2 BASIC19.99■□□□□ 0.79
CDH8P55286 LRRC36-201ENST00000329956 2395 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
CDH8P55286 SNAP47-202ENST00000366759 2362 ntAPPRIS P3 TSL 1 (best) BASIC19.99■□□□□ 0.79
CDH8P55286 TNXA-203ENST00000507684 2038 ntBASIC19.99■□□□□ 0.79
CDH8P55286 TSPO2-202ENST00000373161 958 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
CDH8P55286 TSPY8-202ENST00000383000 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC19.99■□□□□ 0.79
CDH8P55286 TSPY2-202ENST00000383042 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC19.99■□□□□ 0.79
CDH8P55286 MIR564-202ENST00000385049 94 ntBASIC19.99■□□□□ 0.79
CDH8P55286 TSPY3-201ENST00000424594 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC19.99■□□□□ 0.79
CDH8P55286 TMPOP1-202ENST00000424642 1267 ntBASIC19.99■□□□□ 0.79
CDH8P55286 AC134772.1-201ENST00000438872 885 ntTSL 3 BASIC19.99■□□□□ 0.79
CDH8P55286 TSPY10-202ENST00000444056 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC19.99■□□□□ 0.79
CDH8P55286 RPL39L-203ENST00000455270 653 ntAPPRIS P1 TSL 2 BASIC19.99■□□□□ 0.79
CDH8P55286 TSPO2-203ENST00000470917 699 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
CDH8P55286 AC104596.1-202ENST00000507486 759 ntTSL 3 BASIC19.99■□□□□ 0.79
CDH8P55286 AC079385.1-202ENST00000549203 569 ntTSL 4 BASIC19.99■□□□□ 0.79
CDH8P55286 CDKN3-209ENST00000556102 938 ntTSL 5 BASIC19.99■□□□□ 0.79
CDH8P55286 AC009477.2-201ENST00000635976 171 ntAPPRIS P1 BASIC19.99■□□□□ 0.79
CDH8P55286 ISOC2-201ENST00000085068 1122 ntTSL 2 BASIC19.99■□□□□ 0.79
CDH8P55286 AC012615.6-201ENST00000593201 1697 ntTSL 2 BASIC19.99■□□□□ 0.79
CDH8P55286 FBXW9-203ENST00000587955 1437 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
CDH8P55286 ACD-203ENST00000602320 1408 ntAPPRIS ALT2 TSL 5 BASIC19.99■□□□□ 0.79
CDH8P55286 PGAM1-201ENST00000334828 1830 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
CDH8P55286 CARD9-202ENST00000371734 1814 ntTSL 5 BASIC19.99■□□□□ 0.79
CDH8P55286 ADGRL1-202ENST00000361434 5610 ntAPPRIS P3 TSL 1 (best) BASIC19.99■□□□□ 0.79
CDH8P55286 ZAR1L-202ENST00000533490 1564 ntAPPRIS P1 TSL 5 BASIC19.99■□□□□ 0.79
CDH8P55286 EIF5A-204ENST00000416016 1336 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
CDH8P55286 KCNQ5-201ENST00000342056 6688 ntAPPRIS ALT1 TSL 5 BASIC19.99■□□□□ 0.79
CDH8P55286 FPGS-203ENST00000373247 2279 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
CDH8P55286 TBC1D10C-201ENST00000312390 1497 ntTSL 5 BASIC19.99■□□□□ 0.79
CDH8P55286 E4F1-201ENST00000301727 2573 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
CDH8P55286 TMEM8B-204ENST00000439587 2150 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
CDH8P55286 LIPG-203ENST00000577628 2323 ntTSL 2 BASIC19.98■□□□□ 0.79
CDH8P55286 KBTBD2-201ENST00000304056 3745 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
CDH8P55286 GRM5-201ENST00000305432 4475 ntAPPRIS P3 TSL 1 (best) BASIC19.98■□□□□ 0.79
CDH8P55286 MPG-201ENST00000219431 1193 ntAPPRIS P4 TSL 3 BASIC19.98■□□□□ 0.79
CDH8P55286 LINC01024-205ENST00000521563 939 ntTSL 3 BASIC19.98■□□□□ 0.79
CDH8P55286 NDUFB10-202ENST00000543683 830 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
CDH8P55286 CMTM3-210ENST00000565666 769 ntTSL 3 BASIC19.98■□□□□ 0.79
CDH8P55286 MAP3K14-AS1-202ENST00000585351 893 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
CDH8P55286 TXNL4A-211ENST00000592837 611 ntTSL 2 BASIC19.98■□□□□ 0.79
CDH8P55286 AC139887.4-201ENST00000607877 719 ntBASIC19.98■□□□□ 0.79
CDH8P55286 AC006011.2-201ENST00000621313 1158 ntBASIC19.98■□□□□ 0.79
CDH8P55286 CMTM7-201ENST00000334983 2038 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
CDH8P55286 SPATA20-226ENST00000619622 2769 ntAPPRIS P2 TSL 5 BASIC19.98■□□□□ 0.79
CDH8P55286 MCU-202ENST00000373053 2949 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
CDH8P55286 SH2B3-201ENST00000341259 5406 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
CDH8P55286 TEKT5-201ENST00000283025 1612 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
CDH8P55286 CCNA1-202ENST00000440264 1758 ntAPPRIS P1 TSL 2 BASIC19.98■□□□□ 0.79
CDH8P55286 EPB41L4B-201ENST00000374557 4006 ntAPPRIS ALT2 TSL 1 (best) BASIC19.98■□□□□ 0.79
CDH8P55286 AHCYL1-203ENST00000393614 4313 ntTSL 2 BASIC19.98■□□□□ 0.79
CDH8P55286 SLC6A7-203ENST00000524041 2431 ntTSL 5 BASIC19.97■□□□□ 0.79
CDH8P55286 TNFSF9-201ENST00000245817 1665 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
CDH8P55286 TAPT1-201ENST00000405303 4591 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
CDH8P55286 AC140125.2-201ENST00000502515 1517 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
CDH8P55286 IFNAR2-204ENST00000382264 1389 ntAPPRIS ALT2 TSL 1 (best) BASIC19.97■□□□□ 0.79
CDH8P55286 AC004408.2-201ENST00000623613 2777 ntBASIC19.97■□□□□ 0.79
CDH8P55286 LSM12-201ENST00000293406 2308 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
CDH8P55286 LZTS3-201ENST00000329152 5257 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
CDH8P55286 AC093503.3-201ENST00000624917 2352 ntBASIC19.97■□□□□ 0.79
CDH8P55286 LINC01381-201ENST00000431650 466 ntTSL 3 BASIC19.97■□□□□ 0.79
CDH8P55286 AC103564.1-201ENST00000437330 562 ntTSL 5 BASIC19.97■□□□□ 0.79
CDH8P55286 AL512604.3-201ENST00000569583 964 ntBASIC19.97■□□□□ 0.79
CDH8P55286 OBP2B-205ENST00000618116 961 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
CDH8P55286 PRRT1-201ENST00000211413 1909 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
CDH8P55286 COBL-210ENST00000632460 1941 ntTSL 5 BASIC19.97■□□□□ 0.79
CDH8P55286 DGKI-202ENST00000424189 4163 ntAPPRIS ALT2 TSL 5 BASIC19.97■□□□□ 0.79
CDH8P55286 PDE9A-213ENST00000398236 1776 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
CDH8P55286 PRODH-215ENST00000610940 2405 ntAPPRIS P3 TSL 1 (best) BASIC19.97■□□□□ 0.79
CDH8P55286 GLYCTK-202ENST00000436784 1982 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
CDH8P55286 ARSA-203ENST00000395619 1824 ntAPPRIS P1 TSL 5 BASIC19.97■□□□□ 0.79
CDH8P55286 RMND5A-201ENST00000283632 6301 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
CDH8P55286 ADAP2-201ENST00000330889 2934 ntAPPRIS P2 TSL 1 (best) BASIC19.96■□□□□ 0.79
CDH8P55286 RASGRP1-201ENST00000310803 5023 ntAPPRIS P2 TSL 1 (best) BASIC19.96■□□□□ 0.79
CDH8P55286 RASGRP1-204ENST00000539159 5021 ntAPPRIS ALT1 TSL 5 BASIC19.96■□□□□ 0.79
CDH8P55286 TSGA10IP-203ENST00000532620 1925 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
CDH8P55286 SLC9A6-202ENST00000370698 4631 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
CDH8P55286 FGFR1-238ENST00000532791 5590 ntAPPRIS ALT1 TSL 5 BASIC19.96■□□□□ 0.79
CDH8P55286 SPTBN4-207ENST00000595535 6105 ntTSL 5 BASIC19.96■□□□□ 0.79
CDH8P55286 SCYL2-201ENST00000360820 5779 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
CDH8P55286 AL499627.1-201ENST00000569373 2188 ntBASIC19.96■□□□□ 0.79
CDH8P55286 UPK3B-201ENST00000257632 1296 ntAPPRIS P5 TSL 2 BASIC19.96■□□□□ 0.79
CDH8P55286 OCIAD2-201ENST00000273860 636 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
CDH8P55286 BOLA3-202ENST00000327428 639 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
CDH8P55286 AC117947.1-201ENST00000427448 529 ntBASIC19.96■□□□□ 0.79
CDH8P55286 ELP6-205ENST00000439305 880 ntTSL 2 BASIC19.96■□□□□ 0.79
CDH8P55286 BX664615.1-201ENST00000443558 458 ntBASIC19.96■□□□□ 0.79
CDH8P55286 NDUFV2-207ENST00000497577 868 ntTSL 2 BASIC19.96■□□□□ 0.79
CDH8P55286 TMEM64-204ENST00000519519 873 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
CDH8P55286 DYNLL1-205ENST00000548342 662 ntAPPRIS P1 TSL 2 BASIC19.96■□□□□ 0.79
CDH8P55286 AC027796.4-201ENST00000575741 874 ntTSL 5 BASIC19.96■□□□□ 0.79
Retrieved 100 of 98,524 protein–RNA pairs in 29.2 ms