Protein–RNA interactions for Protein: P55273

CDKN2D, Cyclin-dependent kinase 4 inhibitor D, humanhuman

Predictions only

Length 166 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDKN2DP55273 REXO1L10P-201ENST00000615707 1290 ntBASIC18.54■□□□□ 0.56
CDKN2DP55273 REXO1L12P-201ENST00000622156 912 ntBASIC18.54■□□□□ 0.56
CDKN2DP55273 NR5A1-202ENST00000373588 3104 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
CDKN2DP55273 RPS6KB1-204ENST00000443572 1913 ntTSL 2 BASIC18.54■□□□□ 0.56
CDKN2DP55273 AC008764.1-201ENST00000409035 2567 ntAPPRIS P1 TSL 2 BASIC18.54■□□□□ 0.56
CDKN2DP55273 SIGIRR-202ENST00000397632 1598 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
CDKN2DP55273 C5orf30-203ENST00000515669 1573 ntAPPRIS P1 TSL 3 BASIC18.54■□□□□ 0.56
CDKN2DP55273 MTSS1L-204ENST00000616026 2241 ntAPPRIS ALT2 TSL 5 BASIC18.54■□□□□ 0.56
CDKN2DP55273 ANKS3-230ENST00000614075 2387 ntAPPRIS P1 TSL 5 BASIC18.54■□□□□ 0.56
CDKN2DP55273 ATP6V0A2-201ENST00000330342 6542 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
CDKN2DP55273 ETS1-207ENST00000531611 2134 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
CDKN2DP55273 ETV2-203ENST00000402764 1487 ntAPPRIS P3 TSL 1 (best) BASIC18.53■□□□□ 0.56
CDKN2DP55273 CACNA1I-204ENST00000407673 5952 ntAPPRIS ALT2 TSL 1 (best) BASIC18.53■□□□□ 0.56
CDKN2DP55273 SPART-209ENST00000494062 3018 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
CDKN2DP55273 HCK-202ENST00000375852 2082 ntAPPRIS ALT2 TSL 1 (best) BASIC18.53■□□□□ 0.56
CDKN2DP55273 KLHL29-203ENST00000486442 5287 ntAPPRIS P1 TSL 5 BASIC18.53■□□□□ 0.56
CDKN2DP55273 PTGER3-201ENST00000306666 2333 ntAPPRIS ALT2 TSL 1 (best) BASIC18.53■□□□□ 0.56
CDKN2DP55273 FBXO31-201ENST00000311635 5934 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
CDKN2DP55273 ZNF696-201ENST00000330143 2795 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
CDKN2DP55273 DUSP23-203ENST00000368109 729 ntAPPRIS P1 TSL 2 BASIC18.53■□□□□ 0.56
CDKN2DP55273 PMVK-201ENST00000368467 1280 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
CDKN2DP55273 CCDC50-202ENST00000392456 2454 ntAPPRIS P4 TSL 1 (best) BASIC18.53■□□□□ 0.56
CDKN2DP55273 POLR2D-202ENST00000409698 806 ntTSL 2 BASIC18.53■□□□□ 0.56
CDKN2DP55273 MFAP1P1-201ENST00000442257 1255 ntBASIC18.53■□□□□ 0.56
CDKN2DP55273 AC091153.3-201ENST00000497885 472 ntTSL 2 BASIC18.53■□□□□ 0.56
CDKN2DP55273 USP46-AS1-201ENST00000503051 1048 ntTSL 3 BASIC18.53■□□□□ 0.56
CDKN2DP55273 LINC02167-201ENST00000562769 594 ntTSL 3 BASIC18.53■□□□□ 0.56
CDKN2DP55273 SLC25A1P4-201ENST00000567977 778 ntBASIC18.53■□□□□ 0.56
CDKN2DP55273 USP36-216ENST00000589424 970 ntTSL 5 BASIC18.53■□□□□ 0.56
CDKN2DP55273 KIF1BP-204ENST00000626493 2337 ntTSL 5 BASIC18.53■□□□□ 0.56
CDKN2DP55273 ASRGL1-211ENST00000628829 1161 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
CDKN2DP55273 AC011416.4-201ENST00000639283 2195 ntTSL 5 BASIC18.53■□□□□ 0.56
CDKN2DP55273 RPS6KA1-204ENST00000374168 3186 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
CDKN2DP55273 DOK7-201ENST00000340083 2562 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
CDKN2DP55273 DOK7-203ENST00000507039 2551 ntTSL 2 BASIC18.53■□□□□ 0.56
CDKN2DP55273 ORC5-201ENST00000297431 1958 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
CDKN2DP55273 FAM3A-201ENST00000322269 1815 ntTSL 5 BASIC18.53■□□□□ 0.56
CDKN2DP55273 EXOSC3-201ENST00000327304 1806 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
CDKN2DP55273 CHTOP-207ENST00000614256 1840 ntTSL 3 BASIC18.53■□□□□ 0.56
CDKN2DP55273 SETMAR-206ENST00000430981 1671 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
CDKN2DP55273 ISYNA1-206ENST00000578963 1691 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
CDKN2DP55273 TRIM74-201ENST00000285805 1350 ntAPPRIS P2 TSL 1 (best) BASIC18.53■□□□□ 0.56
CDKN2DP55273 TRIM73-201ENST00000323819 1358 ntAPPRIS P2 TSL 1 (best) BASIC18.53■□□□□ 0.56
CDKN2DP55273 ZNF274-212ENST00000617501 2538 ntAPPRIS P4 TSL 1 (best) BASIC18.53■□□□□ 0.56
CDKN2DP55273 MAFF-207ENST00000538999 2365 ntTSL 2 BASIC18.53■□□□□ 0.56
CDKN2DP55273 POLR2C-201ENST00000219252 2057 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
CDKN2DP55273 STRN3-202ENST00000357479 2799 ntAPPRIS P1 TSL 5 BASIC18.53■□□□□ 0.56
CDKN2DP55273 CLEC10A-201ENST00000254868 1797 ntAPPRIS P3 TSL 1 (best) BASIC18.53■□□□□ 0.56
CDKN2DP55273 MARK1-202ENST00000366918 5169 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
CDKN2DP55273 SYT3-206ENST00000600079 2463 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
CDKN2DP55273 ARNTL-203ENST00000403290 2746 ntAPPRIS ALT1 TSL 1 (best) BASIC18.52■□□□□ 0.56
CDKN2DP55273 SORBS3-221ENST00000523965 2028 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
CDKN2DP55273 ASZ1-201ENST00000284629 1865 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
CDKN2DP55273 AC096719.1-201ENST00000510705 1874 ntTSL 5 BASIC18.52■□□□□ 0.56
CDKN2DP55273 MMD2-202ENST00000404774 2415 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
CDKN2DP55273 UBE2Q2-208ENST00000569423 2969 ntTSL 2 BASIC18.52■□□□□ 0.56
CDKN2DP55273 TFCP2-205ENST00000549867 1727 ntTSL 5 BASIC18.52■□□□□ 0.56
CDKN2DP55273 RAPH1-211ENST00000457812 2673 ntAPPRIS ALT2 TSL 2 BASIC18.52■□□□□ 0.56
CDKN2DP55273 KDM4B-202ENST00000381759 3058 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
CDKN2DP55273 AL390961.4-201ENST00000623958 2535 ntBASIC18.52■□□□□ 0.56
CDKN2DP55273 PHKA1-204ENST00000373545 6173 ntTSL 5 BASIC18.52■□□□□ 0.56
CDKN2DP55273 CYP2D6-201ENST00000359033 1433 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
CDKN2DP55273 MADD-208ENST00000405573 1823 ntTSL 5 BASIC18.52■□□□□ 0.56
CDKN2DP55273 FDXR-214ENST00000581530 1827 ntAPPRIS P3 TSL 1 (best) BASIC18.52■□□□□ 0.56
CDKN2DP55273 KRT86-202ENST00000423955 2217 ntAPPRIS P1 TSL 2 BASIC18.52■□□□□ 0.56
CDKN2DP55273 PNMA8B-202ENST00000599531 5308 ntAPPRIS P1 BASIC18.52■□□□□ 0.56
CDKN2DP55273 MICU3-201ENST00000318063 3992 ntAPPRIS P2 TSL 1 (best) BASIC18.52■□□□□ 0.56
CDKN2DP55273 SYNE4-202ENST00000340477 1004 ntAPPRIS ALT2 TSL 1 (best) BASIC18.52■□□□□ 0.56
CDKN2DP55273 ZCCHC24-201ENST00000372333 906 ntTSL 2 BASIC18.52■□□□□ 0.56
CDKN2DP55273 C9orf129-201ENST00000375419 1154 ntAPPRIS P1 TSL 5 BASIC18.52■□□□□ 0.56
CDKN2DP55273 RAP1B-203ENST00000378985 1017 ntTSL 2 BASIC18.52■□□□□ 0.56
CDKN2DP55273 VSIG2-202ENST00000403470 1191 ntTSL 2 BASIC18.52■□□□□ 0.56
CDKN2DP55273 BNIP3L-206ENST00000523515 915 ntTSL 2 BASIC18.52■□□□□ 0.56
CDKN2DP55273 RAP1B-221ENST00000540209 1264 ntTSL 2 BASIC18.52■□□□□ 0.56
CDKN2DP55273 TARBP2-220ENST00000552857 916 ntTSL 5 BASIC18.52■□□□□ 0.56
CDKN2DP55273 DGCR10-201ENST00000609839 495 ntBASIC18.52■□□□□ 0.56
CDKN2DP55273 AC097662.2-201ENST00000641359 267 ntAPPRIS P1 BASIC18.52■□□□□ 0.56
CDKN2DP55273 AC139491.1-201ENST00000512675 1516 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
CDKN2DP55273 PHF12-201ENST00000268756 2957 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
CDKN2DP55273 HMGA1-205ENST00000447654 2159 ntAPPRIS P4 TSL 1 (best) BASIC18.52■□□□□ 0.56
CDKN2DP55273 FOXD4L6-201ENST00000622588 2034 ntAPPRIS P1 BASIC18.52■□□□□ 0.55
CDKN2DP55273 NECTIN3-206ENST00000485303 3664 ntAPPRIS P3 TSL 1 (best) BASIC18.52■□□□□ 0.55
CDKN2DP55273 C14orf180-201ENST00000331952 1455 ntAPPRIS ALT2 TSL 2 BASIC18.52■□□□□ 0.55
CDKN2DP55273 OGFOD2-222ENST00000545317 1481 ntTSL 2 BASIC18.52■□□□□ 0.55
CDKN2DP55273 PRDM1-202ENST00000369091 2612 ntTSL 1 (best) BASIC18.52■□□□□ 0.55
CDKN2DP55273 AP001626.1-201ENST00000424890 2854 ntTSL 1 (best) BASIC18.52■□□□□ 0.55
CDKN2DP55273 EWSR1-207ENST00000406548 2207 ntAPPRIS ALT2 TSL 1 (best) BASIC18.51■□□□□ 0.55
CDKN2DP55273 SYT15-205ENST00000503753 1331 ntAPPRIS ALT2 TSL 1 (best) BASIC18.51■□□□□ 0.55
CDKN2DP55273 SPERT-202ENST00000378966 1842 ntAPPRIS ALT2 TSL 1 (best) BASIC18.51■□□□□ 0.55
CDKN2DP55273 CD248-201ENST00000311330 2558 ntAPPRIS P1 BASIC18.51■□□□□ 0.55
CDKN2DP55273 SLC39A7-201ENST00000374675 2153 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
CDKN2DP55273 LYPD3-201ENST00000244333 1694 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
CDKN2DP55273 SLC25A51-202ENST00000377716 1691 ntAPPRIS P1 TSL 3 BASIC18.51■□□□□ 0.55
CDKN2DP55273 ZCCHC17-205ENST00000615916 1652 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
CDKN2DP55273 KHDC1-202ENST00000370384 1430 ntAPPRIS ALT2 TSL 1 (best) BASIC18.51■□□□□ 0.55
CDKN2DP55273 FAM213B-201ENST00000378424 2765 ntAPPRIS ALT2 TSL 5 BASIC18.51■□□□□ 0.55
CDKN2DP55273 TMEM104-202ENST00000417024 1781 ntTSL 2 BASIC18.51■□□□□ 0.55
CDKN2DP55273 DOC2A-208ENST00000564944 1782 ntAPPRIS P1 TSL 5 BASIC18.51■□□□□ 0.55
CDKN2DP55273 SAAL1-201ENST00000300013 1518 ntAPPRIS ALT1 TSL 2 BASIC18.51■□□□□ 0.55
CDKN2DP55273 MAPKAPK2-202ENST00000367103 2961 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Retrieved 100 of 98,524 protein–RNA pairs in 30.2 ms