Protein–RNA interactions for Protein: P53396

ACLY, ATP-citrate synthase, humanhuman

Predictions only

Length 1,101 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ACLYP53396 BRICD5-201ENST00000328540 1913 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
ACLYP53396 C19orf66-201ENST00000253110 2117 ntAPPRIS P3 TSL 2 BASIC20.66■□□□□ 0.9
ACLYP53396 CCDC102A-201ENST00000258214 2463 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
ACLYP53396 FENDRR-203ENST00000595886 3095 ntTSL 2 BASIC20.65■□□□□ 0.9
ACLYP53396 RUFY1-201ENST00000319449 2646 ntAPPRIS P3 TSL 1 (best) BASIC20.65■□□□□ 0.9
ACLYP53396 RASSF1-201ENST00000327761 1757 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
ACLYP53396 MBIP-203ENST00000416007 1648 ntAPPRIS P3 TSL 1 (best) BASIC20.65■□□□□ 0.9
ACLYP53396 LRRC23-209ENST00000443597 1628 ntAPPRIS P4 TSL 1 (best) BASIC20.65■□□□□ 0.9
ACLYP53396 RPL3-201ENST00000216146 1442 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
ACLYP53396 BACE1-204ENST00000445823 1408 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
ACLYP53396 RBPMS-203ENST00000339877 1341 ntAPPRIS ALT1 TSL 1 (best) BASIC20.65■□□□□ 0.9
ACLYP53396 DARS-AS1-202ENST00000419808 772 ntTSL 5 BASIC20.65■□□□□ 0.9
ACLYP53396 FIGNL1-207ENST00000435566 593 ntTSL 4 BASIC20.65■□□□□ 0.9
ACLYP53396 PPIE-208ENST00000470213 927 ntTSL 3 BASIC20.65■□□□□ 0.9
ACLYP53396 NDUFB9-204ENST00000518008 789 ntTSL 2 BASIC20.65■□□□□ 0.9
ACLYP53396 PPOX-214ENST00000535223 664 ntTSL 3 BASIC20.65■□□□□ 0.9
ACLYP53396 NAT14-202ENST00000587400 416 ntTSL 5 BASIC20.65■□□□□ 0.9
ACLYP53396 SYNGR4-204ENST00000601610 859 ntTSL 3 BASIC20.65■□□□□ 0.9
ACLYP53396 IGHV3OR16-7-201ENST00000604106 360 ntBASIC20.65■□□□□ 0.9
ACLYP53396 AC064862.7-201ENST00000604520 867 ntBASIC20.65■□□□□ 0.9
ACLYP53396 MALAT1-215ENST00000619449 794 ntTSL 3 BASIC20.65■□□□□ 0.9
ACLYP53396 SH3RF3-201ENST00000309415 5803 ntAPPRIS P1 TSL 5 BASIC20.65■□□□□ 0.9
ACLYP53396 AC112907.3-201ENST00000577781 2400 ntBASIC20.65■□□□□ 0.9
ACLYP53396 LIMS2-207ENST00000409808 2315 ntAPPRIS ALT1 TSL 5 BASIC20.65■□□□□ 0.9
ACLYP53396 AP000679.1-202ENST00000319763 2081 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
ACLYP53396 SARAF-214ENST00000545648 1976 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
ACLYP53396 AC114490.1-202ENST00000311990 1887 ntTSL 1 (best) BASIC20.64■□□□□ 0.9
ACLYP53396 EXOSC3-201ENST00000327304 1806 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
ACLYP53396 WNT10B-202ENST00000403957 1817 ntTSL 5 BASIC20.64■□□□□ 0.9
ACLYP53396 AL512380.2-201ENST00000637901 1780 ntTSL 5 BASIC20.64■□□□□ 0.9
ACLYP53396 RYK-208ENST00000620660 2942 ntAPPRIS P3 TSL 1 (best) BASIC20.64■□□□□ 0.9
ACLYP53396 TMPRSS5-209ENST00000544634 1524 ntTSL 2 BASIC20.64■□□□□ 0.9
ACLYP53396 KIF22-203ENST00000561482 2505 ntTSL 2 BASIC20.64■□□□□ 0.9
ACLYP53396 RAP2C-202ENST00000370874 2333 ntAPPRIS P1 TSL 2 BASIC20.64■□□□□ 0.89
ACLYP53396 NEU4-201ENST00000325935 2288 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
ACLYP53396 PRMT2-201ENST00000291705 1011 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
ACLYP53396 TSPY2-201ENST00000320701 1161 ntAPPRIS P5 TSL 1 (best) BASIC20.64■□□□□ 0.89
ACLYP53396 NDUFA12-201ENST00000327772 635 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
ACLYP53396 TSPY2-203ENST00000429039 779 ntAPPRIS ALT2 TSL 2 BASIC20.64■□□□□ 0.89
ACLYP53396 AC091607.1-201ENST00000490318 1060 ntBASIC20.64■□□□□ 0.89
ACLYP53396 ABR-217ENST00000572441 563 ntTSL 4 BASIC20.64■□□□□ 0.89
ACLYP53396 AC011511.2-201ENST00000592893 918 ntTSL 3 BASIC20.64■□□□□ 0.89
ACLYP53396 DNASE1L2-206ENST00000613572 1260 ntAPPRIS P1 TSL 5 BASIC20.64■□□□□ 0.89
ACLYP53396 TP73-AS1-207ENST00000624167 988 ntBASIC20.64■□□□□ 0.89
ACLYP53396 AF228730.7-201ENST00000641842 219 ntBASIC20.64■□□□□ 0.89
ACLYP53396 SUMF2-201ENST00000275607 1894 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
ACLYP53396 SPTBN4-201ENST00000338932 8686 ntAPPRIS ALT1 TSL 5 BASIC20.64■□□□□ 0.89
ACLYP53396 ZNF331-202ENST00000411977 2248 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
ACLYP53396 DNAAF3-207ENST00000527223 2228 ntAPPRIS ALT2 TSL 2 BASIC20.63■□□□□ 0.89
ACLYP53396 CFP-203ENST00000396992 1592 ntAPPRIS P2 TSL 1 (best) BASIC20.63■□□□□ 0.89
ACLYP53396 DBX2-201ENST00000332700 2806 ntAPPRIS P1 TSL 2 BASIC20.63■□□□□ 0.89
ACLYP53396 NFE2L1-204ENST00000536222 2172 ntTSL 2 BASIC20.63■□□□□ 0.89
ACLYP53396 FARSA-207ENST00000588025 2057 ntTSL 5 BASIC20.63■□□□□ 0.89
ACLYP53396 MIXL1-201ENST00000366810 2005 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
ACLYP53396 PDZD7-201ENST00000370215 2032 ntTSL 2 BASIC20.63■□□□□ 0.89
ACLYP53396 EARS2-210ENST00000564501 2027 ntTSL 5 BASIC20.63■□□□□ 0.89
ACLYP53396 STX8-201ENST00000306357 1246 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
ACLYP53396 BEX4-201ENST00000372691 1066 ntAPPRIS P1 TSL 2 BASIC20.63■□□□□ 0.89
ACLYP53396 SYS1-202ENST00000372727 813 ntAPPRIS P1 TSL 3 BASIC20.63■□□□□ 0.89
ACLYP53396 DNASE1L2-202ENST00000382437 1222 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
ACLYP53396 SLC9A3R1-202ENST00000413388 1285 ntTSL 2 BASIC20.63■□□□□ 0.89
ACLYP53396 PMS2P1-201ENST00000431037 1228 ntBASIC20.63■□□□□ 0.89
ACLYP53396 CDV3-207ENST00000508481 661 ntTSL 3 BASIC20.63■□□□□ 0.89
ACLYP53396 C1QB-203ENST00000509305 1254 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
ACLYP53396 RNA5SP419-201ENST00000515908 135 ntBASIC20.63■□□□□ 0.89
ACLYP53396 GOLGA7-203ENST00000518270 808 ntAPPRIS P1 TSL 5 BASIC20.63■□□□□ 0.89
ACLYP53396 AL162171.1-201ENST00000556328 718 ntTSL 3 BASIC20.63■□□□□ 0.89
ACLYP53396 AP001005.1-201ENST00000571755 1248 ntBASIC20.63■□□□□ 0.89
ACLYP53396 CD177-202ENST00000607855 536 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
ACLYP53396 AC117500.6-201ENST00000624871 588 ntBASIC20.63■□□□□ 0.89
ACLYP53396 PKD1P6-201ENST00000343738 4769 ntBASIC20.63■□□□□ 0.89
ACLYP53396 GABRA2-214ENST00000515082 2366 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
ACLYP53396 NECAB3-202ENST00000375238 1942 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
ACLYP53396 MSANTD2-202ENST00000374979 2349 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
ACLYP53396 TPSD1-201ENST00000211076 1499 ntAPPRIS P2 TSL 1 (best) BASIC20.62■□□□□ 0.89
ACLYP53396 KLHL14-201ENST00000358095 1884 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
ACLYP53396 ZBTB22-208ENST00000431845 2651 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
ACLYP53396 CHTOP-207ENST00000614256 1840 ntTSL 3 BASIC20.62■□□□□ 0.89
ACLYP53396 AL353692.3-201ENST00000407031 1396 ntBASIC20.62■□□□□ 0.89
ACLYP53396 IL9RP2-201ENST00000423948 1312 ntBASIC20.62■□□□□ 0.89
ACLYP53396 ST8SIA2-201ENST00000268164 5708 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
ACLYP53396 UBE2J2-201ENST00000347370 2387 ntTSL 3 BASIC20.62■□□□□ 0.89
ACLYP53396 TYMS-202ENST00000323250 693 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
ACLYP53396 ARMC12-202ENST00000373866 1254 ntAPPRIS P1 TSL 3 BASIC20.62■□□□□ 0.89
ACLYP53396 MCFD2-208ENST00000409973 821 ntAPPRIS P1 TSL 2 BASIC20.62■□□□□ 0.89
ACLYP53396 AC092159.3-201ENST00000439196 571 ntTSL 4 BASIC20.62■□□□□ 0.89
ACLYP53396 MINOS1P3-201ENST00000457048 203 ntBASIC20.62■□□□□ 0.89
ACLYP53396 REEP1-209ENST00000541910 969 ntTSL 2 BASIC20.62■□□□□ 0.89
ACLYP53396 FLT3LG-206ENST00000597551 951 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
ACLYP53396 TST-204ENST00000622841 1105 ntAPPRIS P1 TSL 5 BASIC20.62■□□□□ 0.89
ACLYP53396 PITHD1-201ENST00000246151 1603 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
ACLYP53396 CFAP77-203ENST00000393216 1638 ntAPPRIS ALT2 TSL 1 (best) BASIC20.62■□□□□ 0.89
ACLYP53396 NUDT16-201ENST00000502852 1552 ntTSL 2 BASIC20.62■□□□□ 0.89
ACLYP53396 CYP51A1P1-201ENST00000492267 1507 ntBASIC20.62■□□□□ 0.89
ACLYP53396 FMR1-204ENST00000370471 4125 ntTSL 5 BASIC20.62■□□□□ 0.89
ACLYP53396 IQCJ-SCHIP1-204ENST00000485419 2445 ntAPPRIS ALT2 TSL 2 BASIC20.62■□□□□ 0.89
ACLYP53396 PCED1A-201ENST00000356872 1706 ntTSL 2 BASIC20.61■□□□□ 0.89
ACLYP53396 GALNT8-202ENST00000433855 5977 ntTSL 2 BASIC20.61■□□□□ 0.89
ACLYP53396 CHRNB4-202ENST00000412074 1355 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
ACLYP53396 PWWP2AP1-201ENST00000429776 2273 ntBASIC20.61■□□□□ 0.89
Retrieved 100 of 98,524 protein–RNA pairs in 59.7 ms