Protein–RNA interactions for Protein: P49674

CSNK1E, Casein kinase I isoform epsilon, humanhuman

Known RBP Predictions only

Length 416 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1EP49674 C1orf43-210ENST00000640799 1287 ntTSL 5 BASIC18.37■□□□□ 0.53
CSNK1EP49674 WDR45-205ENST00000376358 1432 ntTSL 2 BASIC18.37■□□□□ 0.53
CSNK1EP49674 CTCF-202ENST00000401394 2978 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
CSNK1EP49674 MBIP-203ENST00000416007 1648 ntAPPRIS P3 TSL 1 (best) BASIC18.37■□□□□ 0.53
CSNK1EP49674 WDR18-202ENST00000585809 1608 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
CSNK1EP49674 TMC6-201ENST00000306591 1681 ntTSL 5 BASIC18.37■□□□□ 0.53
CSNK1EP49674 SSX2IP-210ENST00000605755 1933 ntTSL 2 BASIC18.37■□□□□ 0.53
CSNK1EP49674 GNS-207ENST00000542058 2020 ntAPPRIS ALT2 TSL 2 BASIC18.37■□□□□ 0.53
CSNK1EP49674 DLGAP4-201ENST00000339266 5016 ntAPPRIS ALT2 TSL 5 BASIC18.37■□□□□ 0.53
CSNK1EP49674 RSPO1-201ENST00000356545 2621 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
CSNK1EP49674 LPAR1-201ENST00000358883 2687 ntAPPRIS P2 TSL 2 BASIC18.36■□□□□ 0.53
CSNK1EP49674 UBE2Z-201ENST00000360943 3122 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
CSNK1EP49674 MAPK9-203ENST00000393360 4326 ntTSL 5 BASIC18.36■□□□□ 0.53
CSNK1EP49674 DPH1-201ENST00000263083 2221 ntAPPRIS P2 TSL 1 (best) BASIC18.36■□□□□ 0.53
CSNK1EP49674 BAALC-202ENST00000306391 243 ntTSL 5 BASIC18.36■□□□□ 0.53
CSNK1EP49674 PHOSPHO1-201ENST00000310544 1816 ntAPPRIS P1 TSL 2 BASIC18.36■□□□□ 0.53
CSNK1EP49674 CARHSP1-201ENST00000311052 746 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
CSNK1EP49674 BAALC-204ENST00000330955 222 ntTSL 5 BASIC18.36■□□□□ 0.53
CSNK1EP49674 UBL4A-202ENST00000369660 2382 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
CSNK1EP49674 HMGN1-203ENST00000380748 829 ntTSL 3 BASIC18.36■□□□□ 0.53
CSNK1EP49674 VKORC1-205ENST00000394975 1012 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
CSNK1EP49674 CLK3-202ENST00000395066 2621 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
CSNK1EP49674 ACY1-201ENST00000404366 1473 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
CSNK1EP49674 RDX-202ENST00000405097 2761 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
CSNK1EP49674 RDH13-203ENST00000415061 1871 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
CSNK1EP49674 KIAA0895-204ENST00000415803 2865 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
CSNK1EP49674 AKR7L-201ENST00000420396 1240 ntAPPRIS ALT2 TSL 5 BASIC18.36■□□□□ 0.53
CSNK1EP49674 ARSK-202ENST00000504763 1088 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
CSNK1EP49674 TRPC2-202ENST00000526541 1189 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
CSNK1EP49674 ULK3-217ENST00000568667 1470 ntTSL 5 BASIC18.36■□□□□ 0.53
CSNK1EP49674 TAX1BP3-202ENST00000611779 1302 ntTSL 2 BASIC18.36■□□□□ 0.53
CSNK1EP49674 IGHV3-41-201ENST00000613121 348 ntBASIC18.36■□□□□ 0.53
CSNK1EP49674 AC243773.1-201ENST00000614759 544 ntTSL 5 BASIC18.36■□□□□ 0.53
CSNK1EP49674 ZNF843-203ENST00000618063 1765 ntAPPRIS P2 TSL 1 (best) BASIC18.36■□□□□ 0.53
CSNK1EP49674 AL031008.1-201ENST00000619963 541 ntBASIC18.36■□□□□ 0.53
CSNK1EP49674 TREX1-205ENST00000625293 1783 ntBASIC18.36■□□□□ 0.53
CSNK1EP49674 AR-204ENST00000504326 3615 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
CSNK1EP49674 NRXN1-202ENST00000342183 3315 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
CSNK1EP49674 FUT4-201ENST00000358752 6059 ntAPPRIS P1 BASIC18.36■□□□□ 0.53
CSNK1EP49674 TRIM3-202ENST00000359518 3042 ntAPPRIS P1 TSL 5 BASIC18.36■□□□□ 0.53
CSNK1EP49674 IRX5-202ENST00000394636 2401 ntAPPRIS P3 TSL 3 BASIC18.35■□□□□ 0.53
CSNK1EP49674 MAG-202ENST00000392213 2390 ntAPPRIS P4 TSL 1 (best) BASIC18.35■□□□□ 0.53
CSNK1EP49674 TMEM189-201ENST00000371650 2222 ntAPPRIS ALT1 TSL 1 (best) BASIC18.35■□□□□ 0.53
CSNK1EP49674 SORCS2-203ENST00000507866 6152 ntAPPRIS P2 TSL 1 (best) BASIC18.35■□□□□ 0.53
CSNK1EP49674 SLC11A2-208ENST00000546743 1740 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
CSNK1EP49674 EDNRA-206ENST00000511804 1569 ntTSL 2 BASIC18.35■□□□□ 0.53
CSNK1EP49674 SLC25A41-201ENST00000321510 1532 ntAPPRIS P1 TSL 5 BASIC18.35■□□□□ 0.53
CSNK1EP49674 PLD6-201ENST00000321560 2560 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
CSNK1EP49674 PSMA7-203ENST00000370873 996 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
CSNK1EP49674 SDR39U1-201ENST00000399395 1233 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
CSNK1EP49674 KRT18P31-201ENST00000506277 1292 ntBASIC18.35■□□□□ 0.53
CSNK1EP49674 AC021066.1-201ENST00000549788 647 ntTSL 3 BASIC18.35■□□□□ 0.53
CSNK1EP49674 MRPL52-215ENST00000556840 398 ntTSL 2 BASIC18.35■□□□□ 0.53
CSNK1EP49674 LINC00454-206ENST00000609861 841 ntTSL 5 BASIC18.35■□□□□ 0.53
CSNK1EP49674 SPINK2-205ENST00000616980 677 ntTSL 5 BASIC18.35■□□□□ 0.53
CSNK1EP49674 KMT5C-201ENST00000255613 2308 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
CSNK1EP49674 SPG7-202ENST00000341316 2288 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
CSNK1EP49674 ASB16-201ENST00000293414 2139 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
CSNK1EP49674 UBE2F-205ENST00000414443 2100 ntTSL 2 BASIC18.35■□□□□ 0.53
CSNK1EP49674 CD7-206ENST00000583376 1659 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
CSNK1EP49674 ASL-205ENST00000395332 1622 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
CSNK1EP49674 SIGIRR-220ENST00000531205 1649 ntTSL 2 BASIC18.34■□□□□ 0.53
CSNK1EP49674 OLFM1-204ENST00000371793 2444 ntAPPRIS P1 TSL 3 BASIC18.34■□□□□ 0.53
CSNK1EP49674 CFP-203ENST00000396992 1592 ntAPPRIS P2 TSL 1 (best) BASIC18.34■□□□□ 0.53
CSNK1EP49674 DSCC1-201ENST00000313655 2314 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
CSNK1EP49674 ZBTB7A-201ENST00000322357 5422 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
CSNK1EP49674 LINC01547-202ENST00000397841 2303 ntTSL 2 BASIC18.34■□□□□ 0.53
CSNK1EP49674 MGAT5B-201ENST00000301618 4486 ntAPPRIS P3 TSL 5 BASIC18.34■□□□□ 0.53
CSNK1EP49674 POMC-204ENST00000405623 1426 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
CSNK1EP49674 SDF4-201ENST00000263741 2079 ntAPPRIS P3 TSL 1 (best) BASIC18.34■□□□□ 0.53
CSNK1EP49674 SEPT9-211ENST00000585930 1387 ntTSL 2 BASIC18.34■□□□□ 0.53
CSNK1EP49674 EEF1A2-201ENST00000217182 2006 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
CSNK1EP49674 MTMR9LP-204ENST00000441044 2624 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
CSNK1EP49674 SLC25A3-201ENST00000188376 1909 ntAPPRIS ALT1 TSL 1 (best) BASIC18.34■□□□□ 0.53
CSNK1EP49674 PSCA-201ENST00000301258 1020 ntAPPRIS P2 TSL 1 (best) BASIC18.34■□□□□ 0.53
CSNK1EP49674 TMEM150B-201ENST00000326652 943 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
CSNK1EP49674 CST3-202ENST00000398409 832 ntAPPRIS P1 TSL 3 BASIC18.34■□□□□ 0.53
CSNK1EP49674 AC079781.3-201ENST00000449110 356 ntBASIC18.34■□□□□ 0.53
CSNK1EP49674 AC104819.1-201ENST00000504587 486 ntBASIC18.34■□□□□ 0.53
CSNK1EP49674 RPS15A-205ENST00000565420 802 ntAPPRIS P1 TSL 2 BASIC18.34■□□□□ 0.53
CSNK1EP49674 AC090616.6-201ENST00000582640 721 ntBASIC18.34■□□□□ 0.53
CSNK1EP49674 MIR2117HG-201ENST00000588060 506 ntTSL 4 BASIC18.34■□□□□ 0.53
CSNK1EP49674 RABAC1-208ENST00000601078 728 ntTSL 3 BASIC18.34■□□□□ 0.53
CSNK1EP49674 PLAUR-214ENST00000601723 1205 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
CSNK1EP49674 CDK2AP1-207ENST00000618072 1144 ntTSL 3 BASIC18.34■□□□□ 0.53
CSNK1EP49674 GNA14-201ENST00000341700 2482 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
CSNK1EP49674 LRRC4B-201ENST00000389201 2958 ntAPPRIS P1 TSL 2 BASIC18.34■□□□□ 0.53
CSNK1EP49674 EXOC3L2-202ENST00000413988 2964 ntAPPRIS P1 TSL 5 BASIC18.34■□□□□ 0.53
CSNK1EP49674 SMIM3-201ENST00000526627 2332 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
CSNK1EP49674 AC012615.6-201ENST00000593201 1697 ntTSL 2 BASIC18.34■□□□□ 0.53
CSNK1EP49674 AP000679.1-202ENST00000319763 2081 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
CSNK1EP49674 ILDR2-203ENST00000469934 1950 ntAPPRIS ALT2 TSL 5 BASIC18.33■□□□□ 0.53
CSNK1EP49674 RPRD1A-201ENST00000357384 1850 ntAPPRIS P1 TSL 5 BASIC18.33■□□□□ 0.53
CSNK1EP49674 THOP1-202ENST00000395212 1877 ntTSL 2 BASIC18.33■□□□□ 0.53
CSNK1EP49674 MAP3K15-201ENST00000338883 4012 ntAPPRIS P1 TSL 5 BASIC18.33■□□□□ 0.53
CSNK1EP49674 CPEB1-214ENST00000617522 2220 ntTSL 5 BASIC18.33■□□□□ 0.53
CSNK1EP49674 TMPRSS5-212ENST00000545579 2163 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.52
CSNK1EP49674 HEXDC-201ENST00000327949 1733 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
CSNK1EP49674 FEM1AP3-201ENST00000403722 1741 ntBASIC18.33■□□□□ 0.52
CSNK1EP49674 ITM2C-204ENST00000409704 1106 ntTSL 5 BASIC18.33■□□□□ 0.52
Retrieved 100 of 98,524 protein–RNA pairs in 27.8 ms