Protein–RNA interactions for Protein: P29350

PTPN6, Tyrosine-protein phosphatase non-receptor type 6, humanhuman

Predictions only

Length 595 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN6P29350 CYP2D7-207ENST00000612115 1734 ntAPPRIS P1 TSL 5 BASIC17.82■□□□□ 0.44
PTPN6P29350 DYNLT3-203ENST00000432389 719 ntTSL 5 BASIC17.82■□□□□ 0.44
PTPN6P29350 AL359747.1-201ENST00000442370 536 ntTSL 2 BASIC17.82■□□□□ 0.44
PTPN6P29350 CCDC124-201ENST00000445755 938 ntAPPRIS P1 TSL 2 BASIC17.82■□□□□ 0.44
PTPN6P29350 ABCC5-211ENST00000446941 883 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
PTPN6P29350 Z98884.1-201ENST00000451646 830 ntTSL 3 BASIC17.82■□□□□ 0.44
PTPN6P29350 SNORA78-201ENST00000459373 127 ntBASIC17.82■□□□□ 0.44
PTPN6P29350 WDR86-AS1-203ENST00000480632 704 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
PTPN6P29350 ALKAL1-202ENST00000523939 536 ntAPPRIS ALT2 TSL 1 (best) BASIC17.82■□□□□ 0.44
PTPN6P29350 MIR4497-201ENST00000583208 89 ntBASIC17.82■□□□□ 0.44
PTPN6P29350 CCDC124-203ENST00000597436 1055 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
PTPN6P29350 AL158152.2-201ENST00000602703 235 ntTSL 3 BASIC17.82■□□□□ 0.44
PTPN6P29350 AL353708.3-201ENST00000610272 989 ntBASIC17.82■□□□□ 0.44
PTPN6P29350 AC113410.3-201ENST00000623366 203 ntBASIC17.82■□□□□ 0.44
PTPN6P29350 HIPK1-207ENST00000369561 3777 ntTSL 5 BASIC17.82■□□□□ 0.44
PTPN6P29350 NAPRT-202ENST00000426292 1654 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
PTPN6P29350 ZCCHC17-205ENST00000615916 1652 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
PTPN6P29350 GTPBP2-202ENST00000307126 2933 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
PTPN6P29350 TBC1D4-201ENST00000377625 6182 ntAPPRIS ALT2 TSL 1 (best) BASIC17.82■□□□□ 0.44
PTPN6P29350 EGFL6-202ENST00000380602 2385 ntAPPRIS ALT2 TSL 1 (best) BASIC17.82■□□□□ 0.44
PTPN6P29350 KCNQ2-218ENST00000629676 2399 ntTSL 5 BASIC17.82■□□□□ 0.44
PTPN6P29350 AC005332.8-201ENST00000622750 2735 ntBASIC17.82■□□□□ 0.44
PTPN6P29350 RPRM-201ENST00000325926 1471 ntAPPRIS P1 BASIC17.82■□□□□ 0.44
PTPN6P29350 GOLGA3-203ENST00000456883 5496 ntAPPRIS ALT2 TSL 1 (best) BASIC17.82■□□□□ 0.44
PTPN6P29350 SMARCC2-203ENST00000394023 4271 ntAPPRIS ALT2 TSL 1 (best) BASIC17.81■□□□□ 0.44
PTPN6P29350 NARFL-201ENST00000251588 2112 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
PTPN6P29350 CHRFAM7A-202ENST00000397827 2794 ntTSL 5 BASIC17.81■□□□□ 0.44
PTPN6P29350 CHMP4A-201ENST00000347519 1393 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
PTPN6P29350 EIF2B5-201ENST00000273783 2655 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
PTPN6P29350 HNF1A-202ENST00000400024 2337 ntTSL 2 BASIC17.81■□□□□ 0.44
PTPN6P29350 ITPKB-203ENST00000429204 6162 ntAPPRIS P1 TSL 5 BASIC17.81■□□□□ 0.44
PTPN6P29350 PTMS-201ENST00000309083 1139 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
PTPN6P29350 POMC-202ENST00000380794 1295 ntAPPRIS P1 TSL 2 BASIC17.81■□□□□ 0.44
PTPN6P29350 FDX2-207ENST00000494368 584 ntTSL 4 BASIC17.81■□□□□ 0.44
PTPN6P29350 EFTUD1P1-201ENST00000558187 596 ntTSL 4 BASIC17.81■□□□□ 0.44
PTPN6P29350 DCST1-204ENST00000423025 2199 ntAPPRIS ALT2 TSL 2 BASIC17.81■□□□□ 0.44
PTPN6P29350 AL499627.1-201ENST00000569373 2188 ntBASIC17.81■□□□□ 0.44
PTPN6P29350 SMPD1-201ENST00000342245 2452 ntAPPRIS ALT1 TSL 1 (best) BASIC17.81■□□□□ 0.44
PTPN6P29350 FDXR-214ENST00000581530 1827 ntAPPRIS P3 TSL 1 (best) BASIC17.81■□□□□ 0.44
PTPN6P29350 ZCWPW1-201ENST00000360951 2110 ntAPPRIS ALT2 TSL 2 BASIC17.81■□□□□ 0.44
PTPN6P29350 AMIGO1-202ENST00000369864 5088 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
PTPN6P29350 DGKI-202ENST00000424189 4163 ntAPPRIS ALT2 TSL 5 BASIC17.81■□□□□ 0.44
PTPN6P29350 SOST-201ENST00000301691 2300 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
PTPN6P29350 PDE4A-202ENST00000344979 2579 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
PTPN6P29350 FCMR-202ENST00000442471 1441 ntTSL 2 BASIC17.81■□□□□ 0.44
PTPN6P29350 PAQR4-202ENST00000318782 2793 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
PTPN6P29350 MTSS1L-201ENST00000338779 4992 ntAPPRIS P2 TSL 1 (best) BASIC17.8■□□□□ 0.44
PTPN6P29350 NOP9-202ENST00000396802 1942 ntTSL 5 BASIC17.8■□□□□ 0.44
PTPN6P29350 EDA-208ENST00000524573 1381 ntAPPRIS ALT1 TSL 1 (best) BASIC17.8■□□□□ 0.44
PTPN6P29350 ABALON-201ENST00000629058 1903 ntBASIC17.8■□□□□ 0.44
PTPN6P29350 FAM213B-202ENST00000378425 2665 ntAPPRIS ALT2 TSL 2 BASIC17.8■□□□□ 0.44
PTPN6P29350 DDRGK1-201ENST00000354488 1306 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
PTPN6P29350 DKK3-203ENST00000525493 1326 ntTSL 2 BASIC17.8■□□□□ 0.44
PTPN6P29350 P2RX3-204ENST00000616487 1346 ntTSL 5 BASIC17.8■□□□□ 0.44
PTPN6P29350 RPS6KA1-204ENST00000374168 3186 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
PTPN6P29350 TCP11-209ENST00000444780 1841 ntAPPRIS ALT2 TSL 2 BASIC17.8■□□□□ 0.44
PTPN6P29350 HCK-202ENST00000375852 2082 ntAPPRIS ALT2 TSL 1 (best) BASIC17.8■□□□□ 0.44
PTPN6P29350 CDAN1-201ENST00000356231 4637 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
PTPN6P29350 NBPF9-209ENST00000621645 5632 ntAPPRIS ALT2 TSL 2 BASIC17.8■□□□□ 0.44
PTPN6P29350 SAPCD2P4-201ENST00000424595 1171 ntBASIC17.8■□□□□ 0.44
PTPN6P29350 AL357874.1-201ENST00000428948 574 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
PTPN6P29350 AP002982.1-201ENST00000492365 877 ntBASIC17.8■□□□□ 0.44
PTPN6P29350 RPS15-203ENST00000586096 570 ntTSL 2 BASIC17.8■□□□□ 0.44
PTPN6P29350 FAM98C-205ENST00000588262 826 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
PTPN6P29350 L34079.3-201ENST00000600242 546 ntTSL 4 BASIC17.8■□□□□ 0.44
PTPN6P29350 AC068587.9-201ENST00000641814 219 ntBASIC17.8■□□□□ 0.44
PTPN6P29350 MTERF2-202ENST00000392830 1763 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
PTPN6P29350 GUCY1A2-201ENST00000282249 3047 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
PTPN6P29350 GLYCTK-202ENST00000436784 1982 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
PTPN6P29350 PRRT1-202ENST00000375150 1726 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
PTPN6P29350 KLC1-217ENST00000554280 2426 ntTSL 5 BASIC17.8■□□□□ 0.44
PTPN6P29350 MINPP1-201ENST00000371994 2183 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
PTPN6P29350 TYMS-203ENST00000323274 1662 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
PTPN6P29350 PPP2R2C-206ENST00000507294 1667 ntTSL 2 BASIC17.8■□□□□ 0.44
PTPN6P29350 OSM-201ENST00000215781 1854 ntAPPRIS P3 TSL 1 (best) BASIC17.8■□□□□ 0.44
PTPN6P29350 RASA4B-201ENST00000306682 2589 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
PTPN6P29350 WIPF1-206ENST00000409891 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC17.8■□□□□ 0.44
PTPN6P29350 VIPR1-201ENST00000325123 2773 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
PTPN6P29350 CEMP1-202ENST00000567119 1374 ntAPPRIS P2 BASIC17.79■□□□□ 0.44
PTPN6P29350 C6orf118-201ENST00000230301 1812 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
PTPN6P29350 EXOSC3-201ENST00000327304 1806 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
PTPN6P29350 CYP46A1-202ENST00000380228 1597 ntTSL 2 BASIC17.79■□□□□ 0.44
PTPN6P29350 SLC39A3-202ENST00000455372 2940 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
PTPN6P29350 FBXL17-205ENST00000542267 5188 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
PTPN6P29350 CERS4-201ENST00000251363 1797 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
PTPN6P29350 HSD11B1L-221ENST00000583928 1319 ntTSL 5 BASIC17.79■□□□□ 0.44
PTPN6P29350 PRMT5-204ENST00000397441 2418 ntTSL 2 BASIC17.79■□□□□ 0.44
PTPN6P29350 DMRT3-201ENST00000190165 2183 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
PTPN6P29350 C7orf49-202ENST00000424142 1738 ntTSL 2 BASIC17.79■□□□□ 0.44
PTPN6P29350 URI1-202ENST00000392271 3444 ntAPPRIS P3 TSL 1 (best) BASIC17.79■□□□□ 0.44
PTPN6P29350 SPNS3-201ENST00000355530 2133 ntAPPRIS P1 TSL 2 BASIC17.79■□□□□ 0.44
PTPN6P29350 MDK-205ENST00000405308 1166 ntAPPRIS P2 TSL 2 BASIC17.79■□□□□ 0.44
PTPN6P29350 BABAM1-202ENST00000447614 930 ntAPPRIS ALT2 TSL 5 BASIC17.79■□□□□ 0.44
PTPN6P29350 TESC-AS1-201ENST00000547006 1053 ntTSL 2 BASIC17.79■□□□□ 0.44
PTPN6P29350 AC073195.1-201ENST00000607241 877 ntBASIC17.79■□□□□ 0.44
PTPN6P29350 PCDH8-202ENST00000377942 5088 ntAPPRIS P4 TSL 1 (best) BASIC17.79■□□□□ 0.44
PTPN6P29350 MARK2-203ENST00000377810 4560 ntAPPRIS ALT2 TSL 5 BASIC17.79■□□□□ 0.44
PTPN6P29350 PRRT2-212ENST00000636619 2065 ntTSL 5 BASIC17.79■□□□□ 0.44
PTPN6P29350 KDM4B-202ENST00000381759 3058 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
PTPN6P29350 KRT8P11-201ENST00000409686 1436 ntBASIC17.79■□□□□ 0.44
Retrieved 100 of 98,524 protein–RNA pairs in 20.7 ms