Protein–RNA interactions for Protein: P25391

LAMA1, Laminin subunit alpha-1, humanhuman

Predictions only

Length 3,075 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LAMA1P25391 MAIP1-202ENST00000392290 1386 ntAPPRIS P2 TSL 1 (best) BASIC18.34■□□□□ 0.53
LAMA1P25391 CARHSP1-201ENST00000311052 746 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
LAMA1P25391 MCCD1P1-208ENST00000445732 328 ntBASIC18.34■□□□□ 0.53
LAMA1P25391 KRT73-AS1-202ENST00000551089 563 ntTSL 4 BASIC18.34■□□□□ 0.53
LAMA1P25391 AL136038.4-201ENST00000603606 1261 ntBASIC18.34■□□□□ 0.53
LAMA1P25391 LINC01714-202ENST00000635451 896 ntTSL 5 BASIC18.34■□□□□ 0.53
LAMA1P25391 AL158211.5-201ENST00000623583 2518 ntBASIC18.34■□□□□ 0.53
LAMA1P25391 FBXL16-203ENST00000562563 2257 ntTSL 2 BASIC18.34■□□□□ 0.53
LAMA1P25391 OLA1-204ENST00000409546 2071 ntTSL 5 BASIC18.34■□□□□ 0.53
LAMA1P25391 KHNYN-206ENST00000556842 2443 ntAPPRIS P1 TSL 2 BASIC18.34■□□□□ 0.53
LAMA1P25391 EIF2B1-201ENST00000424014 2477 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
LAMA1P25391 IGHV3-15-201ENST00000390603 437 ntAPPRIS P1 BASIC18.34■□□□□ 0.53
LAMA1P25391 IGHV3-47-201ENST00000425060 335 ntBASIC18.34■□□□□ 0.53
LAMA1P25391 CDV3-207ENST00000508481 661 ntTSL 3 BASIC18.34■□□□□ 0.53
LAMA1P25391 NDUFB9-204ENST00000518008 789 ntTSL 2 BASIC18.34■□□□□ 0.53
LAMA1P25391 FAM220A-205ENST00000578372 207 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
LAMA1P25391 LINC01197-204ENST00000611265 956 ntTSL 5 BASIC18.34■□□□□ 0.53
LAMA1P25391 MYC-205ENST00000524013 2150 ntAPPRIS ALT1 TSL 1 (best) BASIC18.34■□□□□ 0.53
LAMA1P25391 NSUN5P1-202ENST00000421140 1535 ntBASIC18.34■□□□□ 0.53
LAMA1P25391 NSUN5P2-203ENST00000457352 1529 ntBASIC18.34■□□□□ 0.53
LAMA1P25391 GAS7-210ENST00000579158 1528 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
LAMA1P25391 RDH13-203ENST00000415061 1871 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
LAMA1P25391 BRICD5-201ENST00000328540 1913 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
LAMA1P25391 KLHL21-206ENST00000610898 1945 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
LAMA1P25391 TM2D3-201ENST00000333202 1381 ntAPPRIS P4 TSL 1 (best) BASIC18.34■□□□□ 0.53
LAMA1P25391 NFS1-204ENST00000397425 1956 ntTSL 5 BASIC18.34■□□□□ 0.53
LAMA1P25391 TMEM220-AS1-201ENST00000579114 575 ntTSL 4 BASIC18.34■□□□□ 0.53
LAMA1P25391 MRAS-204ENST00000464896 1534 ntTSL 2 BASIC18.33■□□□□ 0.53
LAMA1P25391 SPSB3-208ENST00000566339 1784 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
LAMA1P25391 MRPS5-201ENST00000272418 1652 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
LAMA1P25391 UNKL-205ENST00000397464 2180 ntTSL 2 BASIC18.33■□□□□ 0.53
LAMA1P25391 ADAP1-217ENST00000611167 2118 ntTSL 5 BASIC18.33■□□□□ 0.53
LAMA1P25391 GTPBP8-203ENST00000383678 1360 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
LAMA1P25391 FAM129C-208ENST00000599164 2073 ntAPPRIS ALT2 TSL 2 BASIC18.33■□□□□ 0.53
LAMA1P25391 VWA8-AS1-201ENST00000611103 2079 ntTSL 2 BASIC18.33■□□□□ 0.53
LAMA1P25391 WDR1-205ENST00000502702 1691 ntTSL 5 BASIC18.33■□□□□ 0.53
LAMA1P25391 MCFD2-208ENST00000409973 821 ntAPPRIS P1 TSL 2 BASIC18.33■□□□□ 0.53
LAMA1P25391 AC104819.1-201ENST00000504587 486 ntBASIC18.33■□□□□ 0.53
LAMA1P25391 PGAM5P1-201ENST00000518923 814 ntBASIC18.33■□□□□ 0.53
LAMA1P25391 FKBP3-201ENST00000216330 1684 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
LAMA1P25391 RNASEH2A-201ENST00000221486 1165 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
LAMA1P25391 POU4F3-201ENST00000230732 1182 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
LAMA1P25391 ISG15-201ENST00000379389 711 ntAPPRIS P2 TSL 1 (best) BASIC18.33■□□□□ 0.52
LAMA1P25391 CDKN1C-201ENST00000380725 1220 ntAPPRIS ALT2 TSL 2 BASIC18.33■□□□□ 0.52
LAMA1P25391 KRT18P67-201ENST00000432816 1264 ntBASIC18.33■□□□□ 0.52
LAMA1P25391 LAT-205ENST00000454369 1262 ntAPPRIS ALT2 TSL 5 BASIC18.33■□□□□ 0.52
LAMA1P25391 LBX1-AS1-204ENST00000456391 421 ntTSL 5 BASIC18.33■□□□□ 0.52
LAMA1P25391 FIBP-212ENST00000533045 1173 ntTSL 5 BASIC18.33■□□□□ 0.52
LAMA1P25391 ERCC5-207ENST00000535557 1125 ntTSL 5 BASIC18.33■□□□□ 0.52
LAMA1P25391 AC092865.5-201ENST00000545435 363 ntBASIC18.33■□□□□ 0.52
LAMA1P25391 SEC23A-206ENST00000553970 574 ntTSL 4 BASIC18.33■□□□□ 0.52
LAMA1P25391 HOXB1-202ENST00000577092 1414 ntBASIC18.33■□□□□ 0.52
LAMA1P25391 RPS6KL1-216ENST00000557413 2425 ntAPPRIS P1 TSL 5 BASIC18.33■□□□□ 0.52
LAMA1P25391 PIGQ-209ENST00000470411 2112 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
LAMA1P25391 BLACE-201ENST00000378120 2456 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
LAMA1P25391 IFNL4-203ENST00000634680 1421 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
LAMA1P25391 OTOS-202ENST00000391989 645 ntAPPRIS P1 TSL 3 BASIC18.32■□□□□ 0.52
LAMA1P25391 AL356056.2-201ENST00000506914 669 ntTSL 4 BASIC18.32■□□□□ 0.52
LAMA1P25391 AC010226.1-202ENST00000508517 539 ntTSL 2 BASIC18.32■□□□□ 0.52
LAMA1P25391 HMOX2-208ENST00000570646 2147 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
LAMA1P25391 MOGS-201ENST00000233616 2895 ntAPPRIS P3 TSL 1 (best) BASIC18.32■□□□□ 0.52
LAMA1P25391 ATXN7L2-202ENST00000369870 2318 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
LAMA1P25391 TCP11-202ENST00000311875 2166 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
LAMA1P25391 NFE2L1-204ENST00000536222 2172 ntTSL 2 BASIC18.32■□□□□ 0.52
LAMA1P25391 MED22-202ENST00000371999 987 ntTSL 3 BASIC18.32■□□□□ 0.52
LAMA1P25391 ABR-217ENST00000572441 563 ntTSL 4 BASIC18.32■□□□□ 0.52
LAMA1P25391 RABAC1-210ENST00000601891 628 ntTSL 3 BASIC18.32■□□□□ 0.52
LAMA1P25391 HOXA11-AS1_5.1-201ENST00000620211 203 ntBASIC18.32■□□□□ 0.52
LAMA1P25391 PRRT1-202ENST00000375150 1726 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
LAMA1P25391 AC008691.1-203ENST00000515337 1580 ntTSL 2 BASIC18.32■□□□□ 0.52
LAMA1P25391 LRPPRC-202ENST00000409659 1610 ntTSL 5 BASIC18.32■□□□□ 0.52
LAMA1P25391 SRSF2-202ENST00000359995 1927 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
LAMA1P25391 INO80E-201ENST00000304516 1489 ntTSL 2 BASIC18.31■□□□□ 0.52
LAMA1P25391 IFNLR1-205ENST00000374421 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
LAMA1P25391 PMPCA-201ENST00000371717 2174 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
LAMA1P25391 ACBD5-201ENST00000375888 1747 ntAPPRIS ALT2 TSL 5 BASIC18.31■□□□□ 0.52
LAMA1P25391 ISCA2-201ENST00000298818 851 ntTSL 5 BASIC18.31■□□□□ 0.52
LAMA1P25391 C1orf109-203ENST00000464085 919 ntAPPRIS P1 TSL 2 BASIC18.31■□□□□ 0.52
LAMA1P25391 AC022509.3-202ENST00000545819 566 ntTSL 3 BASIC18.31■□□□□ 0.52
LAMA1P25391 MIEN1-205ENST00000577810 806 ntTSL 3 BASIC18.31■□□□□ 0.52
LAMA1P25391 AC015961.2-201ENST00000589281 701 ntTSL 3 BASIC18.31■□□□□ 0.52
LAMA1P25391 HOTTIP_1.1-201ENST00000620415 57 ntBASIC18.31■□□□□ 0.52
LAMA1P25391 AC055717.3-201ENST00000622967 595 ntBASIC18.31■□□□□ 0.52
LAMA1P25391 CNTNAP3B-202ENST00000341990 2666 ntTSL 2 BASIC18.31■□□□□ 0.52
LAMA1P25391 PSMC3IP-204ENST00000587209 1381 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
LAMA1P25391 IRGC-201ENST00000244314 1662 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
LAMA1P25391 C6orf89-203ENST00000373685 1400 ntAPPRIS ALT2 TSL 5 BASIC18.31■□□□□ 0.52
LAMA1P25391 AC021188.1-201ENST00000421534 740 ntTSL 3 BASIC18.31■□□□□ 0.52
LAMA1P25391 RNPS1P1-201ENST00000507437 918 ntBASIC18.31■□□□□ 0.52
LAMA1P25391 SRSF1-209ENST00000585096 568 ntTSL 4 BASIC18.31■□□□□ 0.52
LAMA1P25391 AC148477.8-201ENST00000624298 468 ntBASIC18.31■□□□□ 0.52
LAMA1P25391 TCP11-204ENST00000373979 1882 ntAPPRIS P3 TSL 5 BASIC18.31■□□□□ 0.52
LAMA1P25391 TMEM44-204ENST00000392432 2490 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
LAMA1P25391 SPHK1-203ENST00000545180 2238 ntAPPRIS P3 TSL 2 BASIC18.31■□□□□ 0.52
LAMA1P25391 ZNF276-208ENST00000568064 2203 ntTSL 5 BASIC18.31■□□□□ 0.52
LAMA1P25391 AL512353.2-201ENST00000448759 1962 ntBASIC18.31■□□□□ 0.52
LAMA1P25391 TPSD1-201ENST00000211076 1499 ntAPPRIS P2 TSL 1 (best) BASIC18.31■□□□□ 0.52
LAMA1P25391 CLDND1-203ENST00000394181 2170 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
LAMA1P25391 SEPT2-203ENST00000391971 3315 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
LAMA1P25391 CD1E-211ENST00000368166 1271 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
Retrieved 100 of 98,524 protein–RNA pairs in 22.8 ms