Protein–RNA interactions for Protein: P25067

COL8A2, Collagen alpha-2(VIII) chain, humanhuman

Predictions only

Length 703 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL8A2P25067 PYDC1-201ENST00000302964 813 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
COL8A2P25067 LCN10-205ENST00000497771 723 ntAPPRIS P2 TSL 1 (best) BASIC15.84■□□□□ 0.13
COL8A2P25067 APBB3-216ENST00000511201 1014 ntTSL 5 BASIC15.84■□□□□ 0.13
COL8A2P25067 SSSCA1-206ENST00000531405 879 ntTSL 2 BASIC15.84■□□□□ 0.13
COL8A2P25067 IFI27L2-206ENST00000556727 556 ntTSL 3 BASIC15.84■□□□□ 0.13
COL8A2P25067 ATP5D-207ENST00000591660 637 ntAPPRIS P1 TSL 3 BASIC15.84■□□□□ 0.13
COL8A2P25067 AC239803.1-201ENST00000594189 1278 ntTSL 5 BASIC15.84■□□□□ 0.13
COL8A2P25067 RPARP-AS1-206ENST00000596366 631 ntTSL 3 BASIC15.84■□□□□ 0.13
COL8A2P25067 PRRT1-202ENST00000375150 1726 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
COL8A2P25067 AC008073.3-201ENST00000610442 2281 ntAPPRIS P1 TSL 2 BASIC15.84■□□□□ 0.13
COL8A2P25067 PAIP1-201ENST00000306846 2782 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
COL8A2P25067 CRB2-202ENST00000373631 5550 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
COL8A2P25067 KATNBL1P6-202ENST00000562413 1466 ntBASIC15.84■□□□□ 0.13
COL8A2P25067 NFE2-204ENST00000553070 1523 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
COL8A2P25067 TRPC1-203ENST00000476941 3061 ntAPPRIS ALT2 TSL 1 (best) BASIC15.83■□□□□ 0.13
COL8A2P25067 ACD-201ENST00000219251 2052 ntAPPRIS P3 TSL 2 BASIC15.83■□□□□ 0.13
COL8A2P25067 ICA1-208ENST00000407906 1615 ntTSL 1 (best) BASIC15.83■□□□□ 0.13
COL8A2P25067 RHOBTB2-201ENST00000251822 5451 ntAPPRIS P3 TSL 1 (best) BASIC15.83■□□□□ 0.13
COL8A2P25067 TMEM250-201ENST00000418388 2823 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.13
COL8A2P25067 AP000974.1-201ENST00000623909 2387 ntBASIC15.83■□□□□ 0.12
COL8A2P25067 LINC01586-201ENST00000506090 1840 ntTSL 2 BASIC15.83■□□□□ 0.12
COL8A2P25067 EFS-201ENST00000216733 3118 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
COL8A2P25067 TSPAN14-202ENST00000341863 1037 ntTSL 5 BASIC15.83■□□□□ 0.12
COL8A2P25067 MALL-203ENST00000427178 1070 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
COL8A2P25067 SPAG16-207ENST00000432529 1250 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
COL8A2P25067 ST6GALNAC4P1-201ENST00000435385 499 ntBASIC15.83■□□□□ 0.12
COL8A2P25067 AL162457.2-201ENST00000447909 937 ntTSL 3 BASIC15.83■□□□□ 0.12
COL8A2P25067 AL136307.1-201ENST00000454882 411 ntTSL 2 BASIC15.83■□□□□ 0.12
COL8A2P25067 AC011773.3-202ENST00000549291 790 ntTSL 3 BASIC15.83■□□□□ 0.12
COL8A2P25067 AC004448.5-201ENST00000579897 567 ntTSL 5 BASIC15.83■□□□□ 0.12
COL8A2P25067 RABAC1-210ENST00000601891 628 ntTSL 3 BASIC15.83■□□□□ 0.12
COL8A2P25067 mascRNA-menRNA.2-201ENST00000616984 58 ntBASIC15.83■□□□□ 0.12
COL8A2P25067 SRSF2-202ENST00000359995 1927 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
COL8A2P25067 PIK3R1-201ENST00000320694 2625 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
COL8A2P25067 TCERG1L-201ENST00000368642 2618 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
COL8A2P25067 HOXD10-201ENST00000249501 1989 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
COL8A2P25067 AL512353.2-201ENST00000448759 1962 ntBASIC15.83■□□□□ 0.12
COL8A2P25067 KSR1-205ENST00000509603 2731 ntAPPRIS ALT2 TSL 5 BASIC15.83■□□□□ 0.12
COL8A2P25067 KCNK4-205ENST00000538767 1389 ntTSL 2 BASIC15.83■□□□□ 0.12
COL8A2P25067 RMND5A-201ENST00000283632 6301 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
COL8A2P25067 TGFBR1-201ENST00000374990 5720 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
COL8A2P25067 PFKFB3-204ENST00000379785 2181 ntTSL 5 BASIC15.83■□□□□ 0.12
COL8A2P25067 CD164L2-202ENST00000374027 1457 ntAPPRIS P3 TSL 1 (best) BASIC15.83■□□□□ 0.12
COL8A2P25067 TMPRSS5-201ENST00000299882 2232 ntAPPRIS P3 TSL 1 (best) BASIC15.83■□□□□ 0.12
COL8A2P25067 CCDC106-201ENST00000308964 1546 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
COL8A2P25067 ZNRF1-202ENST00000335325 4620 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
COL8A2P25067 KRT14-201ENST00000167586 1662 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
COL8A2P25067 RAP1GDS1-201ENST00000264572 1686 ntTSL 5 BASIC15.83■□□□□ 0.12
COL8A2P25067 PRPS1-203ENST00000372428 1748 ntTSL 2 BASIC15.82■□□□□ 0.12
COL8A2P25067 THOC3-208ENST00000513482 1796 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
COL8A2P25067 ACSS3-201ENST00000261206 2666 ntAPPRIS ALT1 TSL 1 (best) BASIC15.82■□□□□ 0.12
COL8A2P25067 MRGPRG-AS1-201ENST00000420873 1818 ntTSL 2 BASIC15.82■□□□□ 0.12
COL8A2P25067 ISLR2-208ENST00000565159 2824 ntAPPRIS P1 TSL 3 BASIC15.82■□□□□ 0.12
COL8A2P25067 ARHGAP22-210ENST00000477708 1951 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
COL8A2P25067 FP475955.4-201ENST00000623131 1990 ntBASIC15.82■□□□□ 0.12
COL8A2P25067 RGMB-207ENST00000513185 2052 ntAPPRIS ALT2 TSL 2 BASIC15.82■□□□□ 0.12
COL8A2P25067 LRRC14-201ENST00000292524 5328 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
COL8A2P25067 NADK-201ENST00000341426 3235 ntAPPRIS P3 TSL 2 BASIC15.82■□□□□ 0.12
COL8A2P25067 CCNJL-203ENST00000393977 3320 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
COL8A2P25067 SPRYD7-204ENST00000613924 2285 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
COL8A2P25067 OTOP3-201ENST00000328801 2363 ntAPPRIS P1 TSL 2 BASIC15.82■□□□□ 0.12
COL8A2P25067 HTRA3-201ENST00000307358 2541 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
COL8A2P25067 LARGE2-202ENST00000401752 2516 ntAPPRIS P3 TSL 1 (best) BASIC15.82■□□□□ 0.12
COL8A2P25067 DDRGK1-202ENST00000380201 1128 ntTSL 2 BASIC15.82■□□□□ 0.12
COL8A2P25067 ISCU-202ENST00000392807 1069 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
COL8A2P25067 EEF1D-202ENST00000395119 1249 ntAPPRIS ALT2 TSL 1 (best) BASIC15.82■□□□□ 0.12
COL8A2P25067 GGT1-205ENST00000403838 1033 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
COL8A2P25067 ISCU-203ENST00000431221 799 ntTSL 2 BASIC15.82■□□□□ 0.12
COL8A2P25067 AF250324.1-201ENST00000506276 703 ntTSL 3 BASIC15.82■□□□□ 0.12
COL8A2P25067 LINC00599-204ENST00000521242 716 ntTSL 3 BASIC15.82■□□□□ 0.12
COL8A2P25067 AP006284.1-202ENST00000527113 527 ntTSL 4 BASIC15.82■□□□□ 0.12
COL8A2P25067 DRAP1-205ENST00000527119 581 ntTSL 5 BASIC15.82■□□□□ 0.12
COL8A2P25067 FAM104A-205ENST00000581110 512 ntTSL 2 BASIC15.82■□□□□ 0.12
COL8A2P25067 MIR3180-5-201ENST00000583743 153 ntBASIC15.82■□□□□ 0.12
COL8A2P25067 BCL2L12-208ENST00000600947 633 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
COL8A2P25067 PNMA8A-203ENST00000602246 572 ntAPPRIS ALT2 TSL 4 BASIC15.82■□□□□ 0.12
COL8A2P25067 AC024243.1-201ENST00000609234 778 ntBASIC15.82■□□□□ 0.12
COL8A2P25067 AL358472.4-201ENST00000633140 710 ntBASIC15.82■□□□□ 0.12
COL8A2P25067 SKOR2-202ENST00000425639 3899 ntAPPRIS ALT2 TSL 5 BASIC15.82■□□□□ 0.12
COL8A2P25067 NDUFB9-206ENST00000522532 1319 ntTSL 2 BASIC15.82■□□□□ 0.12
COL8A2P25067 CYB561-205ENST00000542042 1302 ntTSL 2 BASIC15.82■□□□□ 0.12
COL8A2P25067 NOP14-204ENST00000502735 2723 ntAPPRIS ALT2 TSL 5 BASIC15.82■□□□□ 0.12
COL8A2P25067 TAX1BP3-201ENST00000225525 1377 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
COL8A2P25067 AC004408.2-201ENST00000623613 2777 ntBASIC15.82■□□□□ 0.12
COL8A2P25067 RAB29-205ENST00000446390 1441 ntTSL 2 BASIC15.82■□□□□ 0.12
COL8A2P25067 SPAG4-201ENST00000374273 1453 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
COL8A2P25067 AC140125.2-201ENST00000502515 1517 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
COL8A2P25067 ZHX3-212ENST00000558993 1528 ntTSL 5 BASIC15.82■□□□□ 0.12
COL8A2P25067 ZNF385C-201ENST00000436535 1572 ntAPPRIS P1 TSL 5 BASIC15.82■□□□□ 0.12
COL8A2P25067 UBE2Q2-204ENST00000561851 1582 ntTSL 2 BASIC15.82■□□□□ 0.12
COL8A2P25067 AP5S1-203ENST00000379573 1848 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
COL8A2P25067 GGT6-202ENST00000381550 2145 ntTSL 2 BASIC15.82■□□□□ 0.12
COL8A2P25067 GJB3-202ENST00000373366 2217 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
COL8A2P25067 FPGS-203ENST00000373247 2279 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
COL8A2P25067 NOP56-201ENST00000329276 2400 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
COL8A2P25067 SH2B3-201ENST00000341259 5406 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
COL8A2P25067 TBX21-201ENST00000177694 2572 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
COL8A2P25067 AKIRIN2-201ENST00000257787 1662 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
COL8A2P25067 RBM42-201ENST00000262633 1680 ntAPPRIS P2 TSL 1 (best) BASIC15.81■□□□□ 0.12
COL8A2P25067 TYMSOS-201ENST00000323813 844 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
Retrieved 100 of 98,524 protein–RNA pairs in 44.8 ms