Protein–RNA interactions for Protein: P20338

RAB4A, Ras-related protein Rab-4A, humanhuman

Predictions only

Length 218 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB4AP20338 FAM217A-208ENST00000639338 1929 ntTSL 5 BASIC14.36□□□□□ -0.11
RAB4AP20338 LBX1-AS1-201ENST00000430651 2553 ntTSL 2 BASIC14.36□□□□□ -0.11
RAB4AP20338 DIABLO-206ENST00000443649 2250 ntAPPRIS P1 TSL 2 BASIC14.36□□□□□ -0.11
RAB4AP20338 PNKP-215ENST00000600910 1600 ntTSL 5 BASIC14.36□□□□□ -0.11
RAB4AP20338 TACC3-201ENST00000313288 2781 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
RAB4AP20338 TMC6-216ENST00000590602 5268 ntAPPRIS P1 TSL 2 BASIC14.36□□□□□ -0.11
RAB4AP20338 MGEA5-203ENST00000370094 3314 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
RAB4AP20338 TUSC2-201ENST00000232496 1691 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
RAB4AP20338 SLC25A41-201ENST00000321510 1532 ntAPPRIS P1 TSL 5 BASIC14.36□□□□□ -0.11
RAB4AP20338 MORN1-202ENST00000378529 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
RAB4AP20338 AFG3L2-201ENST00000269143 3247 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
RAB4AP20338 SMARCC2-201ENST00000267064 4076 ntAPPRIS P4 TSL 1 (best) BASIC14.36□□□□□ -0.11
RAB4AP20338 CNGB1-201ENST00000251102 5641 ntAPPRIS P3 TSL 1 (best) BASIC14.35□□□□□ -0.11
RAB4AP20338 LLGL2-202ENST00000375227 1374 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
RAB4AP20338 MYOC-201ENST00000037502 2095 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
RAB4AP20338 PRRT1-201ENST00000211413 1909 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
RAB4AP20338 NTSR2-201ENST00000306928 1569 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
RAB4AP20338 GGNBP2-212ENST00000613102 2847 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
RAB4AP20338 MSLNL-201ENST00000442466 2109 ntAPPRIS P1 TSL 5 BASIC14.35□□□□□ -0.11
RAB4AP20338 STOX1-201ENST00000298596 3377 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
RAB4AP20338 WAC-203ENST00000354911 3042 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
RAB4AP20338 LINC00969-219ENST00000453324 1439 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
RAB4AP20338 QPCTL-201ENST00000012049 2310 ntAPPRIS P1 TSL 2 BASIC14.35□□□□□ -0.11
RAB4AP20338 SPATC1L-201ENST00000291672 2303 ntAPPRIS P1 TSL 2 BASIC14.35□□□□□ -0.11
RAB4AP20338 SLC39A1-211ENST00000621013 2322 ntAPPRIS P1 TSL 2 BASIC14.35□□□□□ -0.11
RAB4AP20338 TRAPPC8-210ENST00000582513 3205 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
RAB4AP20338 PARP6-220ENST00000569795 2855 ntAPPRIS P1 TSL 5 BASIC14.35□□□□□ -0.11
RAB4AP20338 PARD3-205ENST00000374773 3420 ntTSL 5 BASIC14.35□□□□□ -0.11
RAB4AP20338 ADRA1A-204ENST00000380573 2548 ntAPPRIS P1 TSL 2 BASIC14.35□□□□□ -0.11
RAB4AP20338 DAGLA-201ENST00000257215 5757 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
RAB4AP20338 CASTOR1-202ENST00000407689 1623 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
RAB4AP20338 EPS8L2-230ENST00000610855 1633 ntTSL 5 BASIC14.35□□□□□ -0.11
RAB4AP20338 MFSD14C-201ENST00000375223 619 ntAPPRIS ALT2 TSL 5 BASIC14.35□□□□□ -0.11
RAB4AP20338 AC092675.2-201ENST00000413274 541 ntTSL 4 BASIC14.35□□□□□ -0.11
RAB4AP20338 AC091799.1-201ENST00000422823 811 ntBASIC14.35□□□□□ -0.11
RAB4AP20338 AC079140.4-201ENST00000507448 529 ntBASIC14.35□□□□□ -0.11
RAB4AP20338 DIRAS1-202ENST00000585334 774 ntAPPRIS P1 BASIC14.35□□□□□ -0.11
RAB4AP20338 TPRG1LP1-201ENST00000598702 760 ntBASIC14.35□□□□□ -0.11
RAB4AP20338 AL358852.1-201ENST00000623174 1268 ntBASIC14.35□□□□□ -0.11
RAB4AP20338 CPXM1-201ENST00000380605 2391 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
RAB4AP20338 TPD52L1-213ENST00000534000 2356 ntAPPRIS P3 TSL 1 (best) BASIC14.35□□□□□ -0.11
RAB4AP20338 SFXN1-201ENST00000321442 4231 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
RAB4AP20338 SPOCK1-202ENST00000394945 4846 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
RAB4AP20338 HENMT1-203ENST00000402983 1696 ntAPPRIS P2 TSL 1 (best) BASIC14.35□□□□□ -0.11
RAB4AP20338 FSCN2-202ENST00000417245 1665 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
RAB4AP20338 MSLN-207ENST00000566549 2418 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
RAB4AP20338 SLC4A3-204ENST00000373760 4134 ntAPPRIS P1 TSL 5 BASIC14.35□□□□□ -0.11
RAB4AP20338 ATP6V0E2-201ENST00000421974 2605 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
RAB4AP20338 TRIM8-201ENST00000302424 2831 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
RAB4AP20338 TWF1-201ENST00000395510 3045 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
RAB4AP20338 ADAM22-204ENST00000398204 9334 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
RAB4AP20338 ECE1-203ENST00000374893 2484 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
RAB4AP20338 TMTC2-203ENST00000548305 2682 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
RAB4AP20338 PDE1C-201ENST00000321453 2898 ntAPPRIS ALT1 TSL 2 BASIC14.35□□□□□ -0.11
RAB4AP20338 AKR7A3-201ENST00000361640 1710 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
RAB4AP20338 CDC42EP4-201ENST00000335793 3272 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
RAB4AP20338 FAM178B-204ENST00000490605 2710 ntAPPRIS ALT2 TSL 5 BASIC14.35□□□□□ -0.11
RAB4AP20338 LHX8-202ENST00000356261 1764 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
RAB4AP20338 ZFAND2B-202ENST00000409097 1765 ntTSL 2 BASIC14.34□□□□□ -0.11
RAB4AP20338 NFATC4-222ENST00000555590 2830 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
RAB4AP20338 CPEB2-202ENST00000345451 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
RAB4AP20338 HAUS4-203ENST00000347758 1428 ntTSL 2 BASIC14.34□□□□□ -0.11
RAB4AP20338 UBE2C-201ENST00000243893 476 ntTSL 2 BASIC14.34□□□□□ -0.11
RAB4AP20338 ODF3B-201ENST00000329363 970 ntAPPRIS P1 TSL 5 BASIC14.34□□□□□ -0.11
RAB4AP20338 HES3-201ENST00000377898 697 ntAPPRIS P1 TSL 2 BASIC14.34□□□□□ -0.11
RAB4AP20338 PRMT2-206ENST00000397638 2131 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
RAB4AP20338 ARHGAP24-206ENST00000503995 1273 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
RAB4AP20338 SCO2-204ENST00000543927 1051 ntAPPRIS P1 TSL 2 BASIC14.34□□□□□ -0.11
RAB4AP20338 AC012414.1-201ENST00000556676 535 ntBASIC14.34□□□□□ -0.11
RAB4AP20338 AL136162.1-201ENST00000607711 1078 ntBASIC14.34□□□□□ -0.11
RAB4AP20338 MIR663AHG-233ENST00000609248 830 ntTSL 5 BASIC14.34□□□□□ -0.11
RAB4AP20338 PLLP-201ENST00000219207 1512 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
RAB4AP20338 ANTXR2-202ENST00000346652 1343 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
RAB4AP20338 ACY1-207ENST00000476854 1319 ntTSL 3 BASIC14.34□□□□□ -0.11
RAB4AP20338 ANXA6-211ENST00000521512 1793 ntTSL 5 BASIC14.34□□□□□ -0.11
RAB4AP20338 PRR5-201ENST00000006251 1767 ntTSL 2 BASIC14.34□□□□□ -0.11
RAB4AP20338 ZNF346-209ENST00000512315 1575 ntTSL 2 BASIC14.34□□□□□ -0.11
RAB4AP20338 IRAK3-203ENST00000545837 1579 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
RAB4AP20338 SEMA3B-213ENST00000618865 2925 ntAPPRIS P3 TSL 5 BASIC14.34□□□□□ -0.11
RAB4AP20338 OPA1-204ENST00000361828 6381 ntAPPRIS ALT1 TSL 5 BASIC14.34□□□□□ -0.11
RAB4AP20338 FAM3A-201ENST00000322269 1815 ntTSL 5 BASIC14.34□□□□□ -0.11
RAB4AP20338 PIGP-207ENST00000464265 3437 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
RAB4AP20338 VSX2-201ENST00000261980 2995 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
RAB4AP20338 ESR1-210ENST00000456483 1368 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
RAB4AP20338 TMEM175-212ENST00000508204 1399 ntTSL 3 BASIC14.34□□□□□ -0.11
RAB4AP20338 RASGRF1-203ENST00000558480 6237 ntAPPRIS P1 TSL 2 BASIC14.34□□□□□ -0.11
RAB4AP20338 SMPD3-203ENST00000563226 2093 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
RAB4AP20338 WDR45B-201ENST00000392325 2587 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
RAB4AP20338 TRIM7-201ENST00000274773 2840 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
RAB4AP20338 BDP1-202ENST00000380675 2861 ntAPPRIS ALT2 TSL 5 BASIC14.33□□□□□ -0.11
RAB4AP20338 TCOF1-206ENST00000445265 4825 ntAPPRIS ALT2 TSL 5 BASIC14.33□□□□□ -0.11
RAB4AP20338 RNFT2-202ENST00000319176 2180 ntTSL 5 BASIC14.33□□□□□ -0.11
RAB4AP20338 RNFT2-209ENST00000622220 2176 ntTSL 5 BASIC14.33□□□□□ -0.11
RAB4AP20338 C14orf28-201ENST00000325192 2915 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
RAB4AP20338 ZMIZ2-202ENST00000309315 5144 ntAPPRIS P4 TSL 2 BASIC14.33□□□□□ -0.12
RAB4AP20338 ANKRD65-201ENST00000427211 1976 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
RAB4AP20338 MTMR12-201ENST00000264934 2215 ntTSL 2 BASIC14.33□□□□□ -0.12
RAB4AP20338 SLC19A2-202ENST00000367804 2976 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
RAB4AP20338 MBNL1-202ENST00000282488 6458 ntTSL 5 BASIC14.33□□□□□ -0.12
RAB4AP20338 WIZP1-201ENST00000531444 2299 ntBASIC14.33□□□□□ -0.12
Retrieved 100 of 98,524 protein–RNA pairs in 21.4 ms