Protein–RNA interactions for Protein: P20248

CCNA2, Cyclin-A2, humanhuman

Predictions only

Length 432 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCNA2P20248 CMTM3-211ENST00000565922 615 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
CCNA2P20248 AC099398.1-201ENST00000567919 2776 ntBASIC17.68■□□□□ 0.42
CCNA2P20248 SLC9A6-208ENST00000636206 4711 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
CCNA2P20248 AC073648.6-201ENST00000641589 218 ntBASIC17.68■□□□□ 0.42
CCNA2P20248 FAM213B-202ENST00000378425 2665 ntAPPRIS ALT2 TSL 2 BASIC17.68■□□□□ 0.42
CCNA2P20248 DNAJC11-201ENST00000294401 2210 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
CCNA2P20248 STK25-203ENST00000403346 2210 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
CCNA2P20248 C11orf49-201ENST00000278460 1645 ntAPPRIS P3 TSL 1 (best) BASIC17.68■□□□□ 0.42
CCNA2P20248 TP73-AS1-203ENST00000423764 2875 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
CCNA2P20248 IL15-201ENST00000296545 2472 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
CCNA2P20248 KCNC2-203ENST00000393288 2485 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
CCNA2P20248 SAAL1-204ENST00000529318 1503 ntAPPRIS ALT1 TSL 5 BASIC17.67■□□□□ 0.42
CCNA2P20248 HSPB2-C11orf52-202ENST00000534100 1521 ntAPPRIS ALT2 TSL 2 BASIC17.67■□□□□ 0.42
CCNA2P20248 PSPC1-206ENST00000619300 2013 ntAPPRIS P1 TSL 5 BASIC17.67■□□□□ 0.42
CCNA2P20248 MRPL2-202ENST00000388752 1588 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
CCNA2P20248 SETD7-202ENST00000404104 1590 ntTSL 2 BASIC17.67■□□□□ 0.42
CCNA2P20248 SKP2-208ENST00000546211 1589 ntTSL 5 BASIC17.67■□□□□ 0.42
CCNA2P20248 AL138752.2-201ENST00000540557 2591 ntAPPRIS P1 TSL 5 BASIC17.67■□□□□ 0.42
CCNA2P20248 EEF1A1-203ENST00000331523 1923 ntAPPRIS P1 TSL 5 BASIC17.67■□□□□ 0.42
CCNA2P20248 C11orf80-214ENST00000532565 1948 ntAPPRIS ALT2 TSL 5 BASIC17.67■□□□□ 0.42
CCNA2P20248 CD8B-203ENST00000390655 1417 ntAPPRIS P2 TSL 1 (best) BASIC17.67■□□□□ 0.42
CCNA2P20248 BACE1-204ENST00000445823 1408 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
CCNA2P20248 CHRFAM7A-202ENST00000397827 2794 ntTSL 5 BASIC17.67■□□□□ 0.42
CCNA2P20248 CYR61-201ENST00000451137 2290 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
CCNA2P20248 AC148477.3-202ENST00000376617 1766 ntTSL 2 BASIC17.67■□□□□ 0.42
CCNA2P20248 SERF1A-201ENST00000317633 963 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
CCNA2P20248 GGT6-202ENST00000381550 2145 ntTSL 2 BASIC17.67■□□□□ 0.42
CCNA2P20248 POU5F1P3-201ENST00000428824 1078 ntBASIC17.67■□□□□ 0.42
CCNA2P20248 AC096537.1-201ENST00000437416 684 ntTSL 5 BASIC17.67■□□□□ 0.42
CCNA2P20248 FAM201B-201ENST00000458407 597 ntBASIC17.67■□□□□ 0.42
CCNA2P20248 HOXB-AS3-204ENST00000466037 522 ntTSL 3 BASIC17.67■□□□□ 0.42
CCNA2P20248 CRIP2-202ENST00000483017 1176 ntTSL 2 BASIC17.67■□□□□ 0.42
CCNA2P20248 F2R-202ENST00000505600 442 ntTSL 2 BASIC17.67■□□□□ 0.42
CCNA2P20248 ADM-205ENST00000528544 586 ntTSL 2 BASIC17.67■□□□□ 0.42
CCNA2P20248 SIVA1-203ENST00000535554 1244 ntAPPRIS ALT1 TSL 2 BASIC17.67■□□□□ 0.42
CCNA2P20248 AC009052.1-201ENST00000567090 298 ntTSL 3 BASIC17.67■□□□□ 0.42
CCNA2P20248 DCTPP1-205ENST00000568973 878 ntTSL 2 BASIC17.67■□□□□ 0.42
CCNA2P20248 MTDHP1-201ENST00000605323 784 ntBASIC17.67■□□□□ 0.42
CCNA2P20248 SLC38A11-203ENST00000409149 1621 ntAPPRIS P2 TSL 2 BASIC17.67■□□□□ 0.42
CCNA2P20248 FAM83A-205ENST00000522648 1604 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
CCNA2P20248 TSPAN17-201ENST00000298564 2810 ntTSL 2 BASIC17.67■□□□□ 0.42
CCNA2P20248 CPEB3-203ENST00000614585 5789 ntAPPRIS P3 TSL 5 BASIC17.67■□□□□ 0.42
CCNA2P20248 MAP2K2-202ENST00000394867 1471 ntTSL 5 BASIC17.67■□□□□ 0.42
CCNA2P20248 NBPF21P-201ENST00000425093 1451 ntBASIC17.67■□□□□ 0.42
CCNA2P20248 CARD9-202ENST00000371734 1814 ntTSL 5 BASIC17.67■□□□□ 0.42
CCNA2P20248 KCNK3-201ENST00000302909 6162 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
CCNA2P20248 CRTC1-201ENST00000321949 2501 ntAPPRIS P3 TSL 1 (best) BASIC17.67■□□□□ 0.42
CCNA2P20248 HEXB-207ENST00000511181 2021 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
CCNA2P20248 DDX31-206ENST00000480876 1333 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
CCNA2P20248 ACTL6A-201ENST00000392662 1899 ntTSL 2 BASIC17.67■□□□□ 0.42
CCNA2P20248 FBLIM1-202ENST00000375766 3695 ntAPPRIS P1 TSL 2 BASIC17.67■□□□□ 0.42
CCNA2P20248 ART5-203ENST00000397068 1504 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
CCNA2P20248 ADAM15-207ENST00000368413 1901 ntTSL 5 BASIC17.66■□□□□ 0.42
CCNA2P20248 TRIM9-201ENST00000298355 5284 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
CCNA2P20248 Z98044.1-201ENST00000632503 1764 ntBASIC17.66■□□□□ 0.42
CCNA2P20248 ENC1-201ENST00000302351 5520 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
CCNA2P20248 PCSK5-201ENST00000376752 5756 ntAPPRIS P3 TSL 1 (best) BASIC17.66■□□□□ 0.42
CCNA2P20248 ZNF500-202ENST00000545009 2440 ntTSL 2 BASIC17.66■□□□□ 0.42
CCNA2P20248 MAP7-203ENST00000438100 2633 ntAPPRIS ALT2 TSL 2 BASIC17.66■□□□□ 0.42
CCNA2P20248 PCSK5-202ENST00000376767 2845 ntTSL 2 BASIC17.66■□□□□ 0.42
CCNA2P20248 RUNX1-207ENST00000437180 5967 ntAPPRIS P3 TSL 5 BASIC17.66■□□□□ 0.42
CCNA2P20248 PFN3-201ENST00000358571 530 ntAPPRIS P1 BASIC17.66■□□□□ 0.42
CCNA2P20248 IL15RA-208ENST00000397251 1046 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
CCNA2P20248 KRASP1-201ENST00000407852 552 ntBASIC17.66■□□□□ 0.42
CCNA2P20248 CCDC107-206ENST00000426546 1242 ntAPPRIS P3 TSL 1 (best) BASIC17.66■□□□□ 0.42
CCNA2P20248 AC007405.3-201ENST00000429172 561 ntTSL 3 BASIC17.66■□□□□ 0.42
CCNA2P20248 TUBB8P6-201ENST00000436895 1288 ntBASIC17.66■□□□□ 0.42
CCNA2P20248 AC128676.1-201ENST00000454392 318 ntBASIC17.66■□□□□ 0.42
CCNA2P20248 RTBDN-203ENST00000458671 1066 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
CCNA2P20248 NOXO1-205ENST00000566005 1144 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
CCNA2P20248 AC007786.1-201ENST00000587859 709 ntTSL 2 BASIC17.66■□□□□ 0.42
CCNA2P20248 GTF2IRD2B-206ENST00000614064 573 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
CCNA2P20248 IL15RA-221ENST00000620865 1037 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
CCNA2P20248 C20orf204-205ENST00000636176 961 ntAPPRIS P5 TSL 5 BASIC17.66■□□□□ 0.42
CCNA2P20248 CHAC1-205ENST00000617961 1498 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
CCNA2P20248 PPRC1-201ENST00000278070 5330 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
CCNA2P20248 NOS3-210ENST00000484524 2537 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
CCNA2P20248 CYP2E1-205ENST00000463117 1912 ntAPPRIS P1 TSL 5 BASIC17.66■□□□□ 0.42
CCNA2P20248 ASXL1-202ENST00000375687 7031 ntAPPRIS P2 TSL 5 BASIC17.66■□□□□ 0.42
CCNA2P20248 ZNF302-201ENST00000423823 2590 ntAPPRIS P3 TSL 1 (best) BASIC17.66■□□□□ 0.42
CCNA2P20248 RNFT2-202ENST00000319176 2180 ntTSL 5 BASIC17.66■□□□□ 0.42
CCNA2P20248 RNFT2-209ENST00000622220 2176 ntTSL 5 BASIC17.66■□□□□ 0.42
CCNA2P20248 POM121C-208ENST00000615331 5835 ntAPPRIS P2 TSL 1 (best) BASIC17.66■□□□□ 0.42
CCNA2P20248 SLC23A3-201ENST00000295738 2037 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
CCNA2P20248 TRIM50-201ENST00000333149 2047 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
CCNA2P20248 SLC16A3-221ENST00000617373 2048 ntAPPRIS P1 TSL 5 BASIC17.65■□□□□ 0.42
CCNA2P20248 CTSD-212ENST00000637815 2003 ntAPPRIS ALT2 TSL 5 BASIC17.65■□□□□ 0.42
CCNA2P20248 PRKAR2A-206ENST00000454963 1849 ntAPPRIS P1 TSL 2 BASIC17.65■□□□□ 0.42
CCNA2P20248 SMC5-AS1-201ENST00000594708 1818 ntTSL 2 BASIC17.65■□□□□ 0.42
CCNA2P20248 UBE3A-201ENST00000232165 5051 ntAPPRIS P3 TSL 5 BASIC17.65■□□□□ 0.42
CCNA2P20248 MTX1-202ENST00000368376 1632 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
CCNA2P20248 TOR3A-203ENST00000367627 2724 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
CCNA2P20248 CCNO-201ENST00000282572 1433 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
CCNA2P20248 HLA-G-201ENST00000360323 1427 ntAPPRIS P2 BASIC17.65■□□□□ 0.42
CCNA2P20248 SYNPO-201ENST00000307662 5374 ntAPPRIS P3 TSL 1 (best) BASIC17.65■□□□□ 0.42
CCNA2P20248 TTLL8-201ENST00000266182 2505 ntAPPRIS ALT2 TSL 5 BASIC17.65■□□□□ 0.42
CCNA2P20248 CENPT-208ENST00000562787 2345 ntAPPRIS P2 TSL 2 BASIC17.65■□□□□ 0.42
CCNA2P20248 SHKBP1-201ENST00000291842 2363 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
CCNA2P20248 HR-201ENST00000312841 5351 ntTSL 5 BASIC17.65■□□□□ 0.42
CCNA2P20248 KCNT1-202ENST00000371757 4717 ntAPPRIS P3 TSL 1 (best) BASIC17.65■□□□□ 0.42
Retrieved 100 of 98,524 protein–RNA pairs in 53.4 ms