Protein–RNA interactions for Protein: P17980

PSMC3, 26S proteasome regulatory subunit 6A, humanhuman

Predictions only

Length 439 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PSMC3P17980 SCARB1-201ENST00000261693 2611 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
PSMC3P17980 MRPL43-205ENST00000370234 798 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
PSMC3P17980 AC092597.1-201ENST00000487352 616 ntBASIC19.54■□□□□ 0.72
PSMC3P17980 HELT-202ENST00000505610 846 ntAPPRIS ALT1 TSL 1 (best) BASIC19.54■□□□□ 0.72
PSMC3P17980 AC012313.10-201ENST00000623509 926 ntBASIC19.54■□□□□ 0.72
PSMC3P17980 NDUFAB1-201ENST00000007516 717 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
PSMC3P17980 HSPD1-202ENST00000388968 2455 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
PSMC3P17980 AC140125.2-201ENST00000502515 1517 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
PSMC3P17980 AGAP2-AS1-201ENST00000542466 1500 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
PSMC3P17980 LIN54-209ENST00000510557 2257 ntTSL 2 BASIC19.54■□□□□ 0.72
PSMC3P17980 RASSF7-205ENST00000454668 1450 ntAPPRIS ALT2 TSL 1 (best) BASIC19.54■□□□□ 0.72
PSMC3P17980 HDHD5-201ENST00000155674 1735 ntAPPRIS P3 TSL 1 (best) BASIC19.54■□□□□ 0.72
PSMC3P17980 RBM26-202ENST00000438724 5152 ntAPPRIS ALT1 TSL 1 (best) BASIC19.53■□□□□ 0.72
PSMC3P17980 UHRF1-203ENST00000615884 2651 ntAPPRIS P1 TSL 2 BASIC19.53■□□□□ 0.72
PSMC3P17980 LRFN4-201ENST00000309602 2431 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
PSMC3P17980 NAPRT-202ENST00000426292 1654 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
PSMC3P17980 SPAG16-204ENST00000413312 2258 ntTSL 5 BASIC19.53■□□□□ 0.72
PSMC3P17980 IMPDH1-214ENST00000496200 2283 ntTSL 2 BASIC19.53■□□□□ 0.72
PSMC3P17980 PDLIM5-205ENST00000380180 2020 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
PSMC3P17980 NFATC1-217ENST00000591814 4819 ntAPPRIS ALT2 TSL 1 (best) BASIC19.53■□□□□ 0.72
PSMC3P17980 AGTR1-209ENST00000497524 2359 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
PSMC3P17980 RPA2-201ENST00000313433 1237 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
PSMC3P17980 EFCAB2-203ENST00000366523 1233 ntAPPRIS P1 TSL 3 BASIC19.53■□□□□ 0.72
PSMC3P17980 HDAC11-204ENST00000404040 967 ntTSL 3 BASIC19.53■□□□□ 0.72
PSMC3P17980 TMEM135-209ENST00000532959 1149 ntTSL 2 BASIC19.53■□□□□ 0.72
PSMC3P17980 C1QTNF1-205ENST00000578229 1294 ntTSL 4 BASIC19.53■□□□□ 0.72
PSMC3P17980 ATP5D-207ENST00000591660 637 ntAPPRIS P1 TSL 3 BASIC19.53■□□□□ 0.72
PSMC3P17980 AC024243.1-201ENST00000609234 778 ntBASIC19.53■□□□□ 0.72
PSMC3P17980 DNAJB6-218ENST00000634080 1005 ntTSL 2 BASIC19.53■□□□□ 0.72
PSMC3P17980 B3GALNT2-201ENST00000313984 1874 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
PSMC3P17980 LGI2-201ENST00000382114 6428 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
PSMC3P17980 ZNF12-201ENST00000342651 2921 ntAPPRIS ALT2 TSL 2 BASIC19.53■□□□□ 0.72
PSMC3P17980 SEC11C-202ENST00000509791 2054 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
PSMC3P17980 WDR90-201ENST00000293879 5488 ntAPPRIS P2 TSL 5 BASIC19.53■□□□□ 0.72
PSMC3P17980 PDLIM2-204ENST00000397760 1847 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
PSMC3P17980 RBFOX1-215ENST00000553186 2196 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
PSMC3P17980 VSTM2A-203ENST00000404951 2521 ntTSL 5 BASIC19.53■□□□□ 0.72
PSMC3P17980 FPGS-203ENST00000373247 2279 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
PSMC3P17980 CBR1-205ENST00000530908 1924 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
PSMC3P17980 AC099778.1-201ENST00000568593 1911 ntBASIC19.53■□□□□ 0.72
PSMC3P17980 BMP1-202ENST00000306385 4229 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
PSMC3P17980 USP39-204ENST00000409766 2033 ntTSL 2 BASIC19.52■□□□□ 0.72
PSMC3P17980 AHCYL1-203ENST00000393614 4313 ntTSL 2 BASIC19.52■□□□□ 0.72
PSMC3P17980 SYT8-202ENST00000381968 1424 ntAPPRIS P2 TSL 5 BASIC19.52■□□□□ 0.72
PSMC3P17980 ERVK13-1-203ENST00000564340 1449 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
PSMC3P17980 SHANK3-203ENST00000445220 5175 ntAPPRIS ALT2 TSL 5 BASIC19.52■□□□□ 0.72
PSMC3P17980 INS-201ENST00000250971 503 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
PSMC3P17980 HEBP2-201ENST00000367697 844 ntTSL 2 BASIC19.52■□□□□ 0.72
PSMC3P17980 AC093901.1-201ENST00000414886 778 ntTSL 5 BASIC19.52■□□□□ 0.72
PSMC3P17980 AC003075.1-204ENST00000433005 540 ntTSL 2 BASIC19.52■□□□□ 0.72
PSMC3P17980 DMKN-212ENST00000443640 842 ntAPPRIS ALT2 TSL 5 BASIC19.52■□□□□ 0.72
PSMC3P17980 PGAP2-206ENST00000459679 795 ntTSL 2 BASIC19.52■□□□□ 0.72
PSMC3P17980 PRAP1-202ENST00000463201 587 ntAPPRIS ALT2 TSL 1 (best) BASIC19.52■□□□□ 0.72
PSMC3P17980 LINC02106-201ENST00000506534 606 ntTSL 2 BASIC19.52■□□□□ 0.72
PSMC3P17980 LY6E-209ENST00000521003 740 ntAPPRIS P2 TSL 2 BASIC19.52■□□□□ 0.72
PSMC3P17980 HOXB8-203ENST00000576562 743 ntAPPRIS ALT1 TSL 2 BASIC19.52■□□□□ 0.72
PSMC3P17980 LINC00092-202ENST00000580908 580 ntTSL 2 BASIC19.52■□□□□ 0.72
PSMC3P17980 CCDC106-206ENST00000591241 1153 ntTSL 3 BASIC19.52■□□□□ 0.72
PSMC3P17980 AC092119.3-201ENST00000612618 583 ntBASIC19.52■□□□□ 0.72
PSMC3P17980 AC012366.1-201ENST00000615411 473 ntTSL 5 BASIC19.52■□□□□ 0.72
PSMC3P17980 VAV1-201ENST00000304076 2825 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
PSMC3P17980 TRA2A-201ENST00000297071 1845 ntAPPRIS P3 TSL 1 (best) BASIC19.52■□□□□ 0.72
PSMC3P17980 PRKAR2A-206ENST00000454963 1849 ntAPPRIS P1 TSL 2 BASIC19.52■□□□□ 0.72
PSMC3P17980 SDHAP1-207ENST00000440850 2000 ntBASIC19.52■□□□□ 0.72
PSMC3P17980 SLC22A17-211ENST00000637426 1563 ntAPPRIS ALT2 TSL 1 (best) BASIC19.52■□□□□ 0.71
PSMC3P17980 S1PR5-201ENST00000333430 2341 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.71
PSMC3P17980 TOR1A-201ENST00000351698 2076 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.71
PSMC3P17980 PRSS12-201ENST00000296498 4809 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
PSMC3P17980 MCTP2-205ENST00000543482 1422 ntTSL 2 BASIC19.51■□□□□ 0.71
PSMC3P17980 NTRK1-201ENST00000358660 2492 ntAPPRIS ALT2 TSL 2 BASIC19.51■□□□□ 0.71
PSMC3P17980 LTBP3-217ENST00000530785 2461 ntTSL 2 BASIC19.51■□□□□ 0.71
PSMC3P17980 RBPMS-210ENST00000520191 1613 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
PSMC3P17980 PTPRK-218ENST00000525459 1722 ntTSL 2 BASIC19.51■□□□□ 0.71
PSMC3P17980 RNPEPL1-201ENST00000270357 5658 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
PSMC3P17980 FAM87B-201ENST00000326734 1947 ntTSL 2 BASIC19.51■□□□□ 0.71
PSMC3P17980 AC093627.4-201ENST00000484550 5008 ntTSL 2 BASIC19.51■□□□□ 0.71
PSMC3P17980 PDZD3-201ENST00000322712 2204 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
PSMC3P17980 AC098818.2-201ENST00000564925 2320 ntBASIC19.51■□□□□ 0.71
PSMC3P17980 NFKBIE-204ENST00000619360 2327 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
PSMC3P17980 GOLGA3-203ENST00000456883 5496 ntAPPRIS ALT2 TSL 1 (best) BASIC19.51■□□□□ 0.71
PSMC3P17980 C7orf50-203ENST00000397100 1264 ntAPPRIS P2 TSL 3 BASIC19.51■□□□□ 0.71
PSMC3P17980 UBE2J2-205ENST00000400930 1021 ntTSL 5 BASIC19.51■□□□□ 0.71
PSMC3P17980 AL023284.2-201ENST00000405850 579 ntBASIC19.51■□□□□ 0.71
PSMC3P17980 AL161452.1-201ENST00000415062 1117 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
PSMC3P17980 LAMTOR4-205ENST00000468582 621 ntTSL 2 BASIC19.51■□□□□ 0.71
PSMC3P17980 CHMP4A-201ENST00000347519 1393 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
PSMC3P17980 KREMEN2-206ENST00000575885 1798 ntTSL 2 BASIC19.51■□□□□ 0.71
PSMC3P17980 SSH1-209ENST00000551165 2354 ntAPPRIS ALT2 TSL 1 (best) BASIC19.51■□□□□ 0.71
PSMC3P17980 MTMR14-201ENST00000296003 2494 ntAPPRIS P4 TSL 1 (best) BASIC19.51■□□□□ 0.71
PSMC3P17980 TBC1D4-201ENST00000377625 6182 ntAPPRIS ALT2 TSL 1 (best) BASIC19.51■□□□□ 0.71
PSMC3P17980 CARD9-201ENST00000371732 2123 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
PSMC3P17980 ETV4-204ENST00000545089 1628 ntTSL 2 BASIC19.51■□□□□ 0.71
PSMC3P17980 L3HYPDH-201ENST00000247194 1527 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
PSMC3P17980 RPL7-202ENST00000396465 1308 ntTSL 3 BASIC19.51■□□□□ 0.71
PSMC3P17980 TMEM151A-201ENST00000327259 2562 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
PSMC3P17980 NCK2-205ENST00000451463 1795 ntTSL 2 BASIC19.5■□□□□ 0.71
PSMC3P17980 CNOT6-201ENST00000261951 6176 ntAPPRIS P1 TSL 5 BASIC19.5■□□□□ 0.71
PSMC3P17980 ACY1-215ENST00000636358 1684 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
PSMC3P17980 CEP55-201ENST00000371485 2638 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
PSMC3P17980 AC036111.1-201ENST00000533973 1582 ntBASIC19.5■□□□□ 0.71
Retrieved 100 of 98,524 protein–RNA pairs in 25.8 ms