Protein–RNA interactions for Protein: P16615

ATP2A2, Sarcoplasmic/endoplasmic reticulum calcium ATPase 2, humanhuman

Known RBP Predictions only

Length 1,042 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATP2A2P16615 TTLL7-214ENST00000610996 2028 ntTSL 5 BASIC20.69■□□□□ 0.9
ATP2A2P16615 CD37-204ENST00000535669 1674 ntTSL 2 BASIC20.69■□□□□ 0.9
ATP2A2P16615 AC124066.1-201ENST00000581122 1660 ntTSL 5 BASIC20.69■□□□□ 0.9
ATP2A2P16615 BTBD11-201ENST00000280758 5767 ntAPPRIS P3 TSL 5 BASIC20.69■□□□□ 0.9
ATP2A2P16615 MYO9A-214ENST00000566885 5111 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
ATP2A2P16615 NFATC1-201ENST00000253506 4642 ntAPPRIS P3 TSL 1 (best) BASIC20.69■□□□□ 0.9
ATP2A2P16615 TMEM189-201ENST00000371650 2222 ntAPPRIS ALT1 TSL 1 (best) BASIC20.69■□□□□ 0.9
ATP2A2P16615 IQSEC2-218ENST00000640694 5958 ntAPPRIS ALT2 TSL 5 BASIC20.69■□□□□ 0.9
ATP2A2P16615 HCG11-201ENST00000411553 5696 ntBASIC20.69■□□□□ 0.9
ATP2A2P16615 AC138430.1-201ENST00000586064 5409 ntTSL 2 BASIC20.68■□□□□ 0.9
ATP2A2P16615 HOXA13-201ENST00000222753 5030 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
ATP2A2P16615 EML3-217ENST00000531557 2509 ntTSL 5 BASIC20.68■□□□□ 0.9
ATP2A2P16615 RAP1GDS1-201ENST00000264572 1686 ntTSL 5 BASIC20.68■□□□□ 0.9
ATP2A2P16615 ILF2-202ENST00000368681 726 ntTSL 2 BASIC20.68■□□□□ 0.9
ATP2A2P16615 SPSB1-203ENST00000377399 1007 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
ATP2A2P16615 AP002383.4-201ENST00000442518 975 ntBASIC20.68■□□□□ 0.9
ATP2A2P16615 NUS1P1-201ENST00000446295 882 ntBASIC20.68■□□□□ 0.9
ATP2A2P16615 AL162457.2-201ENST00000447909 937 ntTSL 3 BASIC20.68■□□□□ 0.9
ATP2A2P16615 NDUFB9-202ENST00000517367 636 ntTSL 3 BASIC20.68■□□□□ 0.9
ATP2A2P16615 LINC02237-202ENST00000521904 477 ntTSL 3 BASIC20.68■□□□□ 0.9
ATP2A2P16615 AC021066.1-201ENST00000549788 647 ntTSL 3 BASIC20.68■□□□□ 0.9
ATP2A2P16615 RNPS1-224ENST00000569598 918 ntTSL 5 BASIC20.68■□□□□ 0.9
ATP2A2P16615 SSBP1-215ENST00000612337 884 ntAPPRIS P1 TSL 2 BASIC20.68■□□□□ 0.9
ATP2A2P16615 AC006538.3-201ENST00000612495 578 ntBASIC20.68■□□□□ 0.9
ATP2A2P16615 METTL23-215ENST00000615984 1171 ntAPPRIS P1 TSL 2 BASIC20.68■□□□□ 0.9
ATP2A2P16615 RPLP0-219ENST00000551150 1344 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
ATP2A2P16615 KIAA1456-201ENST00000400069 1982 ntTSL 2 BASIC20.68■□□□□ 0.9
ATP2A2P16615 STXBP6-203ENST00000419632 1970 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
ATP2A2P16615 HAUS4-217ENST00000555367 1454 ntTSL 5 BASIC20.68■□□□□ 0.9
ATP2A2P16615 BCL11A-209ENST00000489516 1508 ntTSL 5 BASIC20.68■□□□□ 0.9
ATP2A2P16615 ANKRD40-201ENST00000285243 4184 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
ATP2A2P16615 RILPL2-201ENST00000280571 6141 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
ATP2A2P16615 STMN3-201ENST00000370053 2255 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
ATP2A2P16615 FUZ-201ENST00000313777 1675 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
ATP2A2P16615 RPS6KB2-201ENST00000312629 1733 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
ATP2A2P16615 DYNC1LI2-201ENST00000258198 4515 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
ATP2A2P16615 NDOR1-204ENST00000458322 1829 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
ATP2A2P16615 EMC8-202ENST00000435200 1935 ntTSL 2 BASIC20.67■□□□□ 0.9
ATP2A2P16615 LINC01315-202ENST00000424852 1142 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
ATP2A2P16615 LINC01063-201ENST00000441644 348 ntTSL 3 BASIC20.67■□□□□ 0.9
ATP2A2P16615 MHENCR-202ENST00000449500 801 ntTSL 2 BASIC20.67■□□□□ 0.9
ATP2A2P16615 AC009078.2-202ENST00000463353 338 ntBASIC20.67■□□□□ 0.9
ATP2A2P16615 RCHY1-208ENST00000512706 1011 ntTSL 3 BASIC20.67■□□□□ 0.9
ATP2A2P16615 AC105202.1-201ENST00000517833 995 ntTSL 3 BASIC20.67■□□□□ 0.9
ATP2A2P16615 TNNT1-204ENST00000585321 995 ntAPPRIS ALT2 TSL 5 BASIC20.67■□□□□ 0.9
ATP2A2P16615 TBCB-205ENST00000585746 875 ntTSL 3 BASIC20.67■□□□□ 0.9
ATP2A2P16615 ANKRD29-202ENST00000585908 846 ntTSL 2 BASIC20.67■□□□□ 0.9
ATP2A2P16615 AP002414.4-201ENST00000589764 1148 ntBASIC20.67■□□□□ 0.9
ATP2A2P16615 IFNL4P1-201ENST00000607083 540 ntBASIC20.67■□□□□ 0.9
ATP2A2P16615 KCNE1B-204ENST00000623803 811 ntAPPRIS P2 TSL 1 (best) BASIC20.67■□□□□ 0.9
ATP2A2P16615 AL365255.1-201ENST00000637702 847 ntTSL 2 BASIC20.67■□□□□ 0.9
ATP2A2P16615 NDUFAB1-201ENST00000007516 717 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
ATP2A2P16615 MAPK8IP1-201ENST00000241014 3050 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
ATP2A2P16615 LINC00304-201ENST00000321214 2243 ntTSL 2 BASIC20.67■□□□□ 0.9
ATP2A2P16615 TEX13A-201ENST00000600991 1377 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
ATP2A2P16615 SRSF4-201ENST00000373795 2387 ntAPPRIS P2 TSL 1 (best) BASIC20.67■□□□□ 0.9
ATP2A2P16615 CACNA1A-247ENST00000637769 8648 ntAPPRIS ALT2 TSL 1 (best) BASIC20.67■□□□□ 0.9
ATP2A2P16615 AGAP5-203ENST00000581191 2779 ntAPPRIS ALT2 TSL 5 BASIC20.67■□□□□ 0.9
ATP2A2P16615 IL11RA-201ENST00000318041 1728 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
ATP2A2P16615 PITPNC1-201ENST00000299954 6359 ntAPPRIS ALT2 TSL 5 BASIC20.67■□□□□ 0.9
ATP2A2P16615 CLDN14-202ENST00000399135 1752 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
ATP2A2P16615 CNEP1R1-203ENST00000458059 2965 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
ATP2A2P16615 LPAR2-203ENST00000586703 1823 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
ATP2A2P16615 TCF3P1-201ENST00000423021 1937 ntBASIC20.66■□□□□ 0.9
ATP2A2P16615 MMP28-201ENST00000605424 1928 ntAPPRIS P3 TSL 1 (best) BASIC20.66■□□□□ 0.9
ATP2A2P16615 TAPT1-201ENST00000405303 4591 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
ATP2A2P16615 NFATC1-217ENST00000591814 4819 ntAPPRIS ALT2 TSL 1 (best) BASIC20.66■□□□□ 0.9
ATP2A2P16615 PDZD3-201ENST00000322712 2204 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
ATP2A2P16615 ZBTB33-202ENST00000557385 2346 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
ATP2A2P16615 PCDHAC2-201ENST00000289269 5963 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
ATP2A2P16615 KCNA3-201ENST00000369769 2569 ntAPPRIS P1 BASIC20.66■□□□□ 0.9
ATP2A2P16615 ADAP2-201ENST00000330889 2934 ntAPPRIS P2 TSL 1 (best) BASIC20.66■□□□□ 0.9
ATP2A2P16615 GDF7-201ENST00000272224 9749 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
ATP2A2P16615 SLC29A4-202ENST00000396872 5685 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
ATP2A2P16615 TMEM190-201ENST00000291934 593 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
ATP2A2P16615 EXOSC3-202ENST00000396521 768 ntTSL 2 BASIC20.66■□□□□ 0.9
ATP2A2P16615 AP003396.1-201ENST00000501918 507 ntTSL 5 BASIC20.66■□□□□ 0.9
ATP2A2P16615 TRPC2-202ENST00000526541 1189 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
ATP2A2P16615 CALM1-205ENST00000553542 877 ntTSL 5 BASIC20.66■□□□□ 0.9
ATP2A2P16615 LINC02317-201ENST00000555413 426 ntTSL 3 BASIC20.66■□□□□ 0.9
ATP2A2P16615 AC004771.4-201ENST00000576752 474 ntTSL 5 BASIC20.66■□□□□ 0.9
ATP2A2P16615 AC003688.1-201ENST00000577138 489 ntAPPRIS P1 TSL 3 BASIC20.66■□□□□ 0.9
ATP2A2P16615 BEAN1-211ENST00000622872 1171 ntAPPRIS P2 TSL 5 BASIC20.66■□□□□ 0.9
ATP2A2P16615 PPP4C-202ENST00000561610 1333 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
ATP2A2P16615 C1QTNF1-209ENST00000581774 1368 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
ATP2A2P16615 NR1H2-202ENST00000411902 1466 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
ATP2A2P16615 PRDX3-201ENST00000298510 1591 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
ATP2A2P16615 FBXO27-207ENST00000600828 1557 ntAPPRIS ALT1 TSL 5 BASIC20.66■□□□□ 0.9
ATP2A2P16615 GAL3ST1-206ENST00000406955 1635 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
ATP2A2P16615 TBC1D3P2-202ENST00000577902 1649 ntBASIC20.66■□□□□ 0.9
ATP2A2P16615 STK16-201ENST00000396738 1673 ntAPPRIS P1 TSL 2 BASIC20.66■□□□□ 0.9
ATP2A2P16615 ABHD14A-ACY1-202ENST00000463937 1705 ntAPPRIS ALT2 TSL 5 BASIC20.66■□□□□ 0.9
ATP2A2P16615 SLC35A3-224ENST00000640732 1777 ntTSL 5 BASIC20.66■□□□□ 0.9
ATP2A2P16615 INTS11-202ENST00000411962 1832 ntTSL 5 BASIC20.66■□□□□ 0.9
ATP2A2P16615 FBXW8-201ENST00000309909 2343 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
ATP2A2P16615 TRPC1-203ENST00000476941 3061 ntAPPRIS ALT2 TSL 1 (best) BASIC20.66■□□□□ 0.9
ATP2A2P16615 KAZN-203ENST00000376030 6030 ntAPPRIS P1 TSL 5 BASIC20.65■□□□□ 0.9
ATP2A2P16615 STRBP-201ENST00000348403 3337 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
ATP2A2P16615 GALNS-201ENST00000268695 2363 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
ATP2A2P16615 UBAP1-204ENST00000625521 2029 ntTSL 2 BASIC20.65■□□□□ 0.9
Retrieved 100 of 98,524 protein–RNA pairs in 39.4 ms