Protein–RNA interactions for Protein: P13236

CCL4, C-C motif chemokine 4, humanhuman

Predictions only

Length 92 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCL4P13236 MMP11-201ENST00000215743 2291 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
CCL4P13236 ISOC2-203ENST00000438389 1566 ntTSL 2 BASIC17.7■□□□□ 0.42
CCL4P13236 LEFTY2-202ENST00000420304 2085 ntTSL 2 BASIC17.7■□□□□ 0.42
CCL4P13236 TMEM74-201ENST00000297459 1741 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
CCL4P13236 PANK1-201ENST00000307534 6976 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
CCL4P13236 CFAP100-203ENST00000505024 1994 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
CCL4P13236 NR6A1-202ENST00000373584 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
CCL4P13236 CHST1-201ENST00000308064 2718 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
CCL4P13236 GJC3-201ENST00000312891 1116 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
CCL4P13236 GSTO2-201ENST00000338595 1179 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
CCL4P13236 LINC02247-201ENST00000417135 743 ntTSL 3 BASIC17.7■□□□□ 0.42
CCL4P13236 DRAXINP1-201ENST00000437611 948 ntBASIC17.7■□□□□ 0.42
CCL4P13236 FNDC5-205ENST00000496770 837 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
CCL4P13236 PNN-202ENST00000553331 656 ntTSL 3 BASIC17.7■□□□□ 0.42
CCL4P13236 CIB2-208ENST00000560618 804 ntTSL 2 BASIC17.7■□□□□ 0.42
CCL4P13236 AC026471.3-201ENST00000565137 578 ntTSL 2 BASIC17.7■□□□□ 0.42
CCL4P13236 ZFPM1-205ENST00000569086 563 ntTSL 2 BASIC17.7■□□□□ 0.42
CCL4P13236 SYNGR2-202ENST00000585591 949 ntAPPRIS P1 TSL 5 BASIC17.7■□□□□ 0.42
CCL4P13236 AC005332.3-201ENST00000589904 676 ntBASIC17.7■□□□□ 0.42
CCL4P13236 AL732292.2-201ENST00000609649 430 ntBASIC17.7■□□□□ 0.42
CCL4P13236 IL17RC-203ENST00000403601 2388 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
CCL4P13236 CLN5-201ENST00000377453 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
CCL4P13236 APBB1-207ENST00000529519 1442 ntTSL 5 BASIC17.7■□□□□ 0.42
CCL4P13236 NR2F1-205ENST00000615873 1427 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
CCL4P13236 AP005233.1-201ENST00000562341 2424 ntTSL 2 BASIC17.7■□□□□ 0.42
CCL4P13236 EPDR1-201ENST00000199448 2599 ntAPPRIS P3 TSL 1 (best) BASIC17.7■□□□□ 0.42
CCL4P13236 SDF4-201ENST00000263741 2079 ntAPPRIS P3 TSL 1 (best) BASIC17.7■□□□□ 0.42
CCL4P13236 AC006333.2-201ENST00000607957 2099 ntBASIC17.7■□□□□ 0.42
CCL4P13236 KCNN2-207ENST00000610748 2091 ntTSL 3 BASIC17.7■□□□□ 0.42
CCL4P13236 LINC01700-201ENST00000433952 1598 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
CCL4P13236 NUDT16-201ENST00000502852 1552 ntTSL 2 BASIC17.7■□□□□ 0.42
CCL4P13236 SARAF-214ENST00000545648 1976 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
CCL4P13236 NOS3-204ENST00000467517 2377 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
CCL4P13236 MARC2-202ENST00000366913 2134 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
CCL4P13236 EMILIN2-201ENST00000254528 5910 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
CCL4P13236 CCDC74B-202ENST00000392984 1353 ntAPPRIS ALT2 TSL 5 BASIC17.69■□□□□ 0.42
CCL4P13236 FAM3A-204ENST00000369643 1521 ntAPPRIS P1 TSL 2 BASIC17.69■□□□□ 0.42
CCL4P13236 GUCA1A-205ENST00000541991 1921 ntTSL 5 BASIC17.69■□□□□ 0.42
CCL4P13236 KLK12-201ENST00000250351 882 ntAPPRIS P4 TSL 5 BASIC17.69■□□□□ 0.42
CCL4P13236 PARK7-201ENST00000338639 949 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
CCL4P13236 TBPL1-203ENST00000367871 808 ntTSL 2 BASIC17.69■□□□□ 0.42
CCL4P13236 PHGR1-201ENST00000448599 436 ntAPPRIS P1 TSL 5 BASIC17.69■□□□□ 0.42
CCL4P13236 FDX1P1-201ENST00000449115 551 ntBASIC17.69■□□□□ 0.42
CCL4P13236 PCAT7-201ENST00000452148 1164 ntTSL 2 BASIC17.69■□□□□ 0.42
CCL4P13236 TOB2P1-201ENST00000469761 992 ntBASIC17.69■□□□□ 0.42
CCL4P13236 AP003733.1-201ENST00000491725 852 ntBASIC17.69■□□□□ 0.42
CCL4P13236 MRPL52-215ENST00000556840 398 ntTSL 2 BASIC17.69■□□□□ 0.42
CCL4P13236 IFNL4P1-201ENST00000607083 540 ntBASIC17.69■□□□□ 0.42
CCL4P13236 SCAMP4-213ENST00000621748 1172 ntAPPRIS P1 TSL 5 BASIC17.69■□□□□ 0.42
CCL4P13236 C10orf142-202ENST00000623589 1010 ntAPPRIS ALT2 TSL 5 BASIC17.69■□□□□ 0.42
CCL4P13236 GRK4-203ENST00000398052 2202 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
CCL4P13236 PLEKHG2-202ENST00000409797 2205 ntAPPRIS ALT2 TSL 2 BASIC17.69■□□□□ 0.42
CCL4P13236 EXOSC3-201ENST00000327304 1806 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
CCL4P13236 LINC01586-201ENST00000506090 1840 ntTSL 2 BASIC17.69■□□□□ 0.42
CCL4P13236 CHTOP-207ENST00000614256 1840 ntTSL 3 BASIC17.69■□□□□ 0.42
CCL4P13236 RAI14-201ENST00000265109 5092 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
CCL4P13236 DALRD3-201ENST00000313778 1968 ntTSL 2 BASIC17.69■□□□□ 0.42
CCL4P13236 IRF7-201ENST00000330243 1992 ntAPPRIS P4 TSL 5 BASIC17.69■□□□□ 0.42
CCL4P13236 AL158211.5-201ENST00000623583 2518 ntBASIC17.69■□□□□ 0.42
CCL4P13236 KANK3-203ENST00000593649 2672 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
CCL4P13236 PCDH8-202ENST00000377942 5088 ntAPPRIS P4 TSL 1 (best) BASIC17.69■□□□□ 0.42
CCL4P13236 TRIM36-202ENST00000379617 1322 ntTSL 2 BASIC17.69■□□□□ 0.42
CCL4P13236 LINC00960-201ENST00000463183 1333 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
CCL4P13236 MYC-205ENST00000524013 2150 ntAPPRIS ALT1 TSL 1 (best) BASIC17.69■□□□□ 0.42
CCL4P13236 EBF1-202ENST00000380654 2345 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
CCL4P13236 TMEM44-204ENST00000392432 2490 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
CCL4P13236 GNAI1-201ENST00000351004 3347 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
CCL4P13236 SYNDIG1L-201ENST00000331628 2607 ntAPPRIS P1 TSL 5 BASIC17.68■□□□□ 0.42
CCL4P13236 PRELID3B-201ENST00000355937 2626 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
CCL4P13236 ZIM2-206ENST00000599935 2226 ntAPPRIS P1 TSL 5 BASIC17.68■□□□□ 0.42
CCL4P13236 SIX5-203ENST00000560168 1975 ntTSL 4 BASIC17.68■□□□□ 0.42
CCL4P13236 ADAP1-217ENST00000611167 2118 ntTSL 5 BASIC17.68■□□□□ 0.42
CCL4P13236 TOR1B-201ENST00000259339 2769 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
CCL4P13236 TCEAL2-201ENST00000329035 1080 ntAPPRIS P1 TSL 5 BASIC17.68■□□□□ 0.42
CCL4P13236 CORO1B-201ENST00000341356 1881 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
CCL4P13236 CORT-201ENST00000377049 1130 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
CCL4P13236 P3H4-202ENST00000393928 2601 ntAPPRIS P2 TSL 1 (best) BASIC17.68■□□□□ 0.42
CCL4P13236 VKORC1-205ENST00000394975 1012 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
CCL4P13236 KLK12-205ENST00000529888 735 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
CCL4P13236 ABHD17A-204ENST00000590661 1079 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
CCL4P13236 AC022150.1-201ENST00000599222 640 ntTSL 3 BASIC17.68■□□□□ 0.42
CCL4P13236 CYP1B1-AS1-214ENST00000620177 554 ntTSL 4 BASIC17.68■□□□□ 0.42
CCL4P13236 CEACAM3-208ENST00000630848 1110 ntAPPRIS ALT2 TSL 5 BASIC17.68■□□□□ 0.42
CCL4P13236 CLN3-259ENST00000637551 1083 ntTSL 5 BASIC17.68■□□□□ 0.42
CCL4P13236 SUSD1-202ENST00000374263 2973 ntAPPRIS ALT2 TSL 2 BASIC17.68■□□□□ 0.42
CCL4P13236 LRRC75A-201ENST00000409083 2656 ntAPPRIS P3 TSL 2 BASIC17.68■□□□□ 0.42
CCL4P13236 EGFR-202ENST00000342916 2239 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
CCL4P13236 UPP1-201ENST00000331803 1932 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
CCL4P13236 TM9SF1-203ENST00000524835 1938 ntTSL 2 BASIC17.68■□□□□ 0.42
CCL4P13236 AC034236.2-201ENST00000606662 1610 ntBASIC17.68■□□□□ 0.42
CCL4P13236 TAF4-201ENST00000252996 4628 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
CCL4P13236 ASCL4-201ENST00000342331 2260 ntAPPRIS P1 BASIC17.68■□□□□ 0.42
CCL4P13236 HOXD10-201ENST00000249501 1989 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
CCL4P13236 AC233280.1-201ENST00000423600 1684 ntTSL 2 BASIC17.67■□□□□ 0.42
CCL4P13236 AOC1-202ENST00000416793 2453 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
CCL4P13236 SMPD1-203ENST00000527275 2188 ntAPPRIS P3 TSL 2 BASIC17.67■□□□□ 0.42
CCL4P13236 RPUSD1-202ENST00000561734 2159 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
CCL4P13236 BYSL-201ENST00000230340 2029 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
CCL4P13236 VWA8-AS1-201ENST00000611103 2079 ntTSL 2 BASIC17.67■□□□□ 0.42
CCL4P13236 ENGASE-205ENST00000579016 2579 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Retrieved 100 of 98,524 protein–RNA pairs in 21.2 ms