Protein–RNA interactions for Protein: P12838

DEFA4, Neutrophil defensin 4, humanhuman

Predictions only

Length 97 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DEFA4P12838 CMTM3-211ENST00000565922 615 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
DEFA4P12838 NOXO1-205ENST00000566005 1144 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
DEFA4P12838 NDUFB10-204ENST00000569148 628 ntTSL 2 BASIC15.26■□□□□ 0.03
DEFA4P12838 ELAC1-203ENST00000588577 694 ntTSL 2 BASIC15.26■□□□□ 0.03
DEFA4P12838 AC005225.2-202ENST00000617980 408 ntTSL 4 BASIC15.26■□□□□ 0.03
DEFA4P12838 SLC35A3-218ENST00000639994 1114 ntTSL 5 BASIC15.26■□□□□ 0.03
DEFA4P12838 C21orf91-203ENST00000400559 1593 ntAPPRIS ALT1 TSL 5 BASIC15.26■□□□□ 0.03
DEFA4P12838 PXK-206ENST00000463280 2825 ntTSL 2 BASIC15.26■□□□□ 0.03
DEFA4P12838 PANX1-202ENST00000436171 2750 ntAPPRIS ALT1 TSL 1 (best) BASIC15.26■□□□□ 0.03
DEFA4P12838 VAV1-204ENST00000596764 2775 ntTSL 2 BASIC15.26■□□□□ 0.03
DEFA4P12838 CIRBP-215ENST00000588030 1509 ntAPPRIS P3 TSL 5 BASIC15.26■□□□□ 0.03
DEFA4P12838 TCTN1-223ENST00000550703 2149 ntTSL 2 BASIC15.26■□□□□ 0.03
DEFA4P12838 AATF-208ENST00000619387 2141 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
DEFA4P12838 DVL2-201ENST00000005340 3018 ntAPPRIS P2 TSL 1 (best) BASIC15.26■□□□□ 0.03
DEFA4P12838 FARP1-242ENST00000627049 5103 ntTSL 5 BASIC15.26■□□□□ 0.03
DEFA4P12838 SEPT9-246ENST00000592951 1793 ntAPPRIS ALT2 TSL 2 BASIC15.26■□□□□ 0.03
DEFA4P12838 ZNF843-203ENST00000618063 1765 ntAPPRIS P2 TSL 1 (best) BASIC15.26■□□□□ 0.03
DEFA4P12838 ZDHHC8-202ENST00000334554 5046 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
DEFA4P12838 AC010173.1-201ENST00000549023 1453 ntTSL 2 BASIC15.26■□□□□ 0.03
DEFA4P12838 EARS2-210ENST00000564501 2027 ntTSL 5 BASIC15.26■□□□□ 0.03
DEFA4P12838 MCIDAS-201ENST00000513312 1736 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
DEFA4P12838 ETV7-205ENST00000538992 1434 ntTSL 2 BASIC15.26■□□□□ 0.03
DEFA4P12838 CARNS1-202ENST00000445895 3971 ntAPPRIS P1 TSL 5 BASIC15.26■□□□□ 0.03
DEFA4P12838 CBSL-210ENST00000624934 1992 ntTSL 5 BASIC15.25■□□□□ 0.03
DEFA4P12838 CCDC157-203ENST00000405659 3052 ntAPPRIS P3 TSL 1 (best) BASIC15.25■□□□□ 0.03
DEFA4P12838 YY1-201ENST00000262238 6697 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
DEFA4P12838 ALDH7A1-215ENST00000553117 1935 ntTSL 2 BASIC15.25■□□□□ 0.03
DEFA4P12838 RSPO4-201ENST00000217260 2707 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
DEFA4P12838 FAM219B-204ENST00000563119 2721 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
DEFA4P12838 NRBP1-203ENST00000379852 2163 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
DEFA4P12838 DCST1-204ENST00000423025 2199 ntAPPRIS ALT2 TSL 2 BASIC15.25■□□□□ 0.03
DEFA4P12838 FAM83A-205ENST00000522648 1604 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
DEFA4P12838 PTK6-201ENST00000217185 2401 ntTSL 2 BASIC15.25■□□□□ 0.03
DEFA4P12838 ZNF500-201ENST00000219478 5880 ntAPPRIS P1 TSL 2 BASIC15.25■□□□□ 0.03
DEFA4P12838 ACSL4-201ENST00000340800 5333 ntAPPRIS P4 TSL 5 BASIC15.25■□□□□ 0.03
DEFA4P12838 C15orf56-202ENST00000623360 2129 ntTSL 2 BASIC15.25■□□□□ 0.03
DEFA4P12838 AC008060.1-201ENST00000401499 1551 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
DEFA4P12838 NOL3-204ENST00000564053 1592 ntAPPRIS ALT2 TSL 2 BASIC15.25■□□□□ 0.03
DEFA4P12838 PYCR1-204ENST00000403172 1811 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
DEFA4P12838 GCHFR-201ENST00000260447 777 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
DEFA4P12838 IZUMO2-201ENST00000293405 728 ntAPPRIS P2 TSL 1 (best) BASIC15.25■□□□□ 0.03
DEFA4P12838 MRPS24-201ENST00000317534 707 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
DEFA4P12838 PFN3-201ENST00000358571 530 ntAPPRIS P1 BASIC15.25■□□□□ 0.03
DEFA4P12838 IFI6-203ENST00000362020 828 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
DEFA4P12838 C1orf50-201ENST00000372525 996 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
DEFA4P12838 CD99-203ENST00000381184 918 ntAPPRIS ALT2 TSL 5 BASIC15.25■□□□□ 0.03
DEFA4P12838 OGG1-209ENST00000383826 1069 ntTSL 5 BASIC15.25■□□□□ 0.03
DEFA4P12838 EPHA5-AS1-202ENST00000509473 1177 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
DEFA4P12838 KRT18P16-201ENST00000510337 1294 ntBASIC15.25■□□□□ 0.03
DEFA4P12838 CXXC5-AS1-201ENST00000514287 577 ntTSL 4 BASIC15.25■□□□□ 0.03
DEFA4P12838 AC073912.1-201ENST00000546264 587 ntTSL 3 BASIC15.25■□□□□ 0.03
DEFA4P12838 AC127496.6-201ENST00000576215 338 ntTSL 3 BASIC15.25■□□□□ 0.03
DEFA4P12838 WDR34-201ENST00000372715 1755 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
DEFA4P12838 CPEB2-202ENST00000345451 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
DEFA4P12838 CRHR2-207ENST00000471646 2530 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
DEFA4P12838 PTP4A3-202ENST00000349124 2710 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
DEFA4P12838 CBS-203ENST00000398158 2453 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
DEFA4P12838 CBSL-206ENST00000624406 2453 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
DEFA4P12838 PCGF6-201ENST00000337211 1950 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
DEFA4P12838 GABBR1-202ENST00000376977 1739 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
DEFA4P12838 RECK-201ENST00000377966 4888 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
DEFA4P12838 GTF3C5-201ENST00000342018 1905 ntTSL 5 BASIC15.25■□□□□ 0.03
DEFA4P12838 ACYP2-203ENST00000406041 1913 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
DEFA4P12838 NUMBL-202ENST00000540131 1931 ntAPPRIS ALT2 TSL 2 BASIC15.25■□□□□ 0.03
DEFA4P12838 CCNO-201ENST00000282572 1433 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
DEFA4P12838 AC090164.3-201ENST00000610780 2143 ntBASIC15.25■□□□□ 0.03
DEFA4P12838 LTBP2-205ENST00000556690 5614 ntAPPRIS ALT2 TSL 5 BASIC15.25■□□□□ 0.03
DEFA4P12838 GNAL-202ENST00000334049 6535 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
DEFA4P12838 MTCL1-205ENST00000517570 6009 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
DEFA4P12838 PPRC1-201ENST00000278070 5330 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
DEFA4P12838 SHISA6-204ENST00000441885 7575 ntAPPRIS P3 TSL 5 BASIC15.24■□□□□ 0.03
DEFA4P12838 ATP6V1D-201ENST00000216442 1845 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
DEFA4P12838 KLHDC4-203ENST00000347925 1821 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
DEFA4P12838 WWOX-202ENST00000402655 1594 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
DEFA4P12838 SNX19-209ENST00000530356 1562 ntTSL 2 BASIC15.24■□□□□ 0.03
DEFA4P12838 SLC9A6-208ENST00000636206 4711 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
DEFA4P12838 BBS5-202ENST00000392663 3107 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
DEFA4P12838 IGSF9-206ENST00000611023 2663 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
DEFA4P12838 MTMR12-201ENST00000264934 2215 ntTSL 2 BASIC15.24■□□□□ 0.03
DEFA4P12838 ACVR1B-205ENST00000541224 1791 ntTSL 2 BASIC15.24■□□□□ 0.03
DEFA4P12838 ARRB2-216ENST00000574954 1348 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
DEFA4P12838 L2HGDH-203ENST00000421284 1958 ntAPPRIS P1 TSL 2 BASIC15.24■□□□□ 0.03
DEFA4P12838 YPEL5-205ENST00000402708 1735 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
DEFA4P12838 CXorf49-202ENST00000535490 1715 ntAPPRIS P1 TSL 5 BASIC15.24■□□□□ 0.03
DEFA4P12838 CXorf49B-202ENST00000542739 1715 ntAPPRIS P1 TSL 5 BASIC15.24■□□□□ 0.03
DEFA4P12838 ZBTB8A-201ENST00000316459 1943 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
DEFA4P12838 UPP1-201ENST00000331803 1932 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
DEFA4P12838 RRAS-201ENST00000246792 1044 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
DEFA4P12838 IPO13-201ENST00000372339 1201 ntTSL 2 BASIC15.24■□□□□ 0.03
DEFA4P12838 NREP-209ENST00000455559 698 ntAPPRIS P1 TSL 4 BASIC15.24■□□□□ 0.03
DEFA4P12838 LINC00894-209ENST00000458274 547 ntTSL 2 BASIC15.24■□□□□ 0.03
DEFA4P12838 HOXB-AS3-204ENST00000466037 522 ntTSL 3 BASIC15.24■□□□□ 0.03
DEFA4P12838 EMC9-206ENST00000560403 872 ntTSL 2 BASIC15.24■□□□□ 0.03
DEFA4P12838 KANSL1-AS1-203ENST00000572973 424 ntTSL 3 BASIC15.24■□□□□ 0.03
DEFA4P12838 SYNGR4-202ENST00000595322 533 ntTSL 3 BASIC15.24■□□□□ 0.03
DEFA4P12838 SMAGP-206ENST00000604188 433 ntTSL 3 BASIC15.24■□□□□ 0.03
DEFA4P12838 GTF2IRD2B-206ENST00000614064 573 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
DEFA4P12838 MCCC1-201ENST00000265594 2545 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
DEFA4P12838 MEPCE-202ENST00000414441 2261 ntTSL 2 BASIC15.24■□□□□ 0.03
DEFA4P12838 EIF2B5-201ENST00000273783 2655 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Retrieved 100 of 98,524 protein–RNA pairs in 33.6 ms