Protein–RNA interactions for Protein: P05538

HLA-DQB2, HLA class II histocompatibility antigen, DQ beta 2 chain, humanhuman

Predictions only

Length 268 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB2P05538 ABHD11-207ENST00000458339 890 ntTSL 3 BASIC19.01■□□□□ 0.63
HLA-DQB2P05538 CCDC28A-203ENST00000617445 1240 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
HLA-DQB2P05538 AL513523.10-201ENST00000623024 1186 ntAPPRIS P1 TSL 5 BASIC19.01■□□□□ 0.63
HLA-DQB2P05538 FKRP-202ENST00000391909 2801 ntAPPRIS P1 TSL 2 BASIC19.01■□□□□ 0.63
HLA-DQB2P05538 EXOSC3-201ENST00000327304 1806 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
HLA-DQB2P05538 IRF7-202ENST00000348655 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC19.01■□□□□ 0.63
HLA-DQB2P05538 TPSB2-203ENST00000612142 1352 ntAPPRIS P5 TSL 1 (best) BASIC19.01■□□□□ 0.63
HLA-DQB2P05538 COPS7A-204ENST00000534947 2034 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
HLA-DQB2P05538 MTSS1L-201ENST00000338779 4992 ntAPPRIS P2 TSL 1 (best) BASIC19.01■□□□□ 0.63
HLA-DQB2P05538 GPR75-201ENST00000394705 2115 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
HLA-DQB2P05538 OBSL1-204ENST00000404537 5841 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
HLA-DQB2P05538 KANSL1-218ENST00000638275 5352 ntTSL 5 BASIC19.01■□□□□ 0.63
HLA-DQB2P05538 LLGL2-203ENST00000392550 3509 ntAPPRIS P2 TSL 1 (best) BASIC19.01■□□□□ 0.63
HLA-DQB2P05538 LYPD3-201ENST00000244333 1694 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
HLA-DQB2P05538 CBX1-202ENST00000393408 2422 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
HLA-DQB2P05538 MTERF2-202ENST00000392830 1763 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
HLA-DQB2P05538 EPHA10-202ENST00000373048 5425 ntAPPRIS P2 TSL 5 BASIC19.01■□□□□ 0.63
HLA-DQB2P05538 PHF2-202ENST00000375376 3045 ntTSL 5 BASIC19■□□□□ 0.63
HLA-DQB2P05538 WDR37-206ENST00000620998 1303 ntTSL 5 BASIC19■□□□□ 0.63
HLA-DQB2P05538 PDLIM4-201ENST00000253754 2282 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
HLA-DQB2P05538 PLEKHB2-204ENST00000409158 2277 ntTSL 2 BASIC19■□□□□ 0.63
HLA-DQB2P05538 AL365232.1-201ENST00000423730 1636 ntAPPRIS P1 TSL 5 BASIC19■□□□□ 0.63
HLA-DQB2P05538 DPP10-203ENST00000393147 2758 ntAPPRIS ALT2 TSL 1 (best) BASIC19■□□□□ 0.63
HLA-DQB2P05538 ADAMTS9-202ENST00000459780 2871 ntTSL 1 (best) BASIC19■□□□□ 0.63
HLA-DQB2P05538 TFCP2-205ENST00000549867 1727 ntTSL 5 BASIC19■□□□□ 0.63
HLA-DQB2P05538 FAM206A-201ENST00000322940 2134 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
HLA-DQB2P05538 EML6-201ENST00000356458 8320 ntAPPRIS P1 TSL 5 BASIC19■□□□□ 0.63
HLA-DQB2P05538 MEN1-202ENST00000315422 3148 ntAPPRIS ALT1 TSL 5 BASIC19■□□□□ 0.63
HLA-DQB2P05538 HSCB-201ENST00000216027 1114 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
HLA-DQB2P05538 PTS-201ENST00000280362 935 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
HLA-DQB2P05538 ADCYAP1-202ENST00000450565 918 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
HLA-DQB2P05538 ECEL1P2-202ENST00000465689 757 ntBASIC19■□□□□ 0.63
HLA-DQB2P05538 MIR3180-5-201ENST00000583743 153 ntBASIC19■□□□□ 0.63
HLA-DQB2P05538 IRF3-222ENST00000599144 1117 ntTSL 1 (best) BASIC19■□□□□ 0.63
HLA-DQB2P05538 SUSD3-205ENST00000617293 1076 ntAPPRIS ALT2 TSL 3 BASIC19■□□□□ 0.63
HLA-DQB2P05538 AC010653.2-201ENST00000623505 997 ntBASIC19■□□□□ 0.63
HLA-DQB2P05538 TRIM61-201ENST00000329314 1582 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
HLA-DQB2P05538 TSSC4-201ENST00000333256 1686 ntAPPRIS P3 TSL 1 (best) BASIC19■□□□□ 0.63
HLA-DQB2P05538 ACVR1B-203ENST00000426655 1782 ntTSL 2 BASIC19■□□□□ 0.63
HLA-DQB2P05538 PSTPIP1-203ENST00000558012 1896 ntAPPRIS P2 TSL 1 (best) BASIC19■□□□□ 0.63
HLA-DQB2P05538 TMPRSS5-205ENST00000538955 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC19■□□□□ 0.63
HLA-DQB2P05538 PSAP-205ENST00000610929 1969 ntTSL 1 (best) BASIC19■□□□□ 0.63
HLA-DQB2P05538 RTEL1-204ENST00000370003 2273 ntTSL 2 BASIC19■□□□□ 0.63
HLA-DQB2P05538 CABP7-201ENST00000216144 3259 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
HLA-DQB2P05538 BLOC1S3-201ENST00000433642 2601 ntAPPRIS P1 TSL 2 BASIC19■□□□□ 0.63
HLA-DQB2P05538 PKMYT1-203ENST00000431515 2308 ntTSL 2 BASIC19■□□□□ 0.63
HLA-DQB2P05538 KCNH1-210ENST00000640044 1818 ntTSL 1 (best) BASIC19■□□□□ 0.63
HLA-DQB2P05538 APAF1-210ENST00000551964 5444 ntAPPRIS P4 TSL 1 (best) BASIC18.99■□□□□ 0.63
HLA-DQB2P05538 SIKE1-201ENST00000060969 2190 ntAPPRIS P3 TSL 1 (best) BASIC18.99■□□□□ 0.63
HLA-DQB2P05538 FBXO24-202ENST00000427939 2087 ntTSL 2 BASIC18.99■□□□□ 0.63
HLA-DQB2P05538 BAIAP2-204ENST00000428708 2095 ntAPPRIS ALT2 TSL 1 (best) BASIC18.99■□□□□ 0.63
HLA-DQB2P05538 UBTF-202ENST00000343638 4684 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
HLA-DQB2P05538 LURAP1-201ENST00000371980 1854 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
HLA-DQB2P05538 PAX1-201ENST00000398485 2838 ntAPPRIS P3 TSL 5 BASIC18.99■□□□□ 0.63
HLA-DQB2P05538 TMEM250-201ENST00000418388 2823 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
HLA-DQB2P05538 EEF1AKMT2-201ENST00000368836 1462 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
HLA-DQB2P05538 LINC01568-207ENST00000641790 1380 ntBASIC18.99■□□□□ 0.63
HLA-DQB2P05538 CHCHD6-201ENST00000290913 1006 ntAPPRIS P2 TSL 1 (best) BASIC18.99■□□□□ 0.63
HLA-DQB2P05538 ING1-202ENST00000338450 1189 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
HLA-DQB2P05538 ANK1-206ENST00000348036 622 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
HLA-DQB2P05538 DHRS4L2-202ENST00000397071 1117 ntTSL 2 BASIC18.99■□□□□ 0.63
HLA-DQB2P05538 AC128688.1-201ENST00000487626 519 ntBASIC18.99■□□□□ 0.63
HLA-DQB2P05538 SLC25A11-202ENST00000544061 952 ntTSL 3 BASIC18.99■□□□□ 0.63
HLA-DQB2P05538 AC015712.4-203ENST00000559673 630 ntTSL 3 BASIC18.99■□□□□ 0.63
HLA-DQB2P05538 RAB11B-AS1-201ENST00000593581 1013 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
HLA-DQB2P05538 FAM87A-204ENST00000613235 858 ntBASIC18.99■□□□□ 0.63
HLA-DQB2P05538 CR769767.2-201ENST00000622735 460 ntBASIC18.99■□□□□ 0.63
HLA-DQB2P05538 CKMT1A-202ENST00000413453 1911 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
HLA-DQB2P05538 KLHL29-203ENST00000486442 5287 ntAPPRIS P1 TSL 5 BASIC18.99■□□□□ 0.63
HLA-DQB2P05538 MAN1B1-207ENST00000535144 2296 ntTSL 2 BASIC18.99■□□□□ 0.63
HLA-DQB2P05538 GOLPH3-201ENST00000265070 2721 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
HLA-DQB2P05538 GRM2-204ENST00000442933 2064 ntTSL 5 BASIC18.99■□□□□ 0.63
HLA-DQB2P05538 KBTBD2-201ENST00000304056 3745 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
HLA-DQB2P05538 TWIST2-202ENST00000612363 1404 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
HLA-DQB2P05538 FLT1-207ENST00000615840 6453 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
HLA-DQB2P05538 PON1-201ENST00000222381 2568 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
HLA-DQB2P05538 NFATC4-228ENST00000556759 2025 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
HLA-DQB2P05538 CLN3-206ENST00000360019 1840 ntTSL 2 BASIC18.98■□□□□ 0.63
HLA-DQB2P05538 CDC14B-203ENST00000375242 2965 ntTSL 2 BASIC18.98■□□□□ 0.63
HLA-DQB2P05538 KMT2B-201ENST00000420124 8469 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
HLA-DQB2P05538 KCNK4-205ENST00000538767 1389 ntTSL 2 BASIC18.98■□□□□ 0.63
HLA-DQB2P05538 KANSL1L-203ENST00000418791 3562 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
HLA-DQB2P05538 KLC1-217ENST00000554280 2426 ntTSL 5 BASIC18.98■□□□□ 0.63
HLA-DQB2P05538 UQCRQ-201ENST00000378665 586 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
HLA-DQB2P05538 MIR564-202ENST00000385049 94 ntBASIC18.98■□□□□ 0.63
HLA-DQB2P05538 CYB561D2-204ENST00000424512 1212 ntAPPRIS P1 TSL 5 BASIC18.98■□□□□ 0.63
HLA-DQB2P05538 UNC5B-AS1-201ENST00000447119 647 ntTSL 2 BASIC18.98■□□□□ 0.63
HLA-DQB2P05538 GXYLT1P6-201ENST00000456472 1187 ntBASIC18.98■□□□□ 0.63
HLA-DQB2P05538 LY6E-211ENST00000521699 1256 ntAPPRIS P2 TSL 5 BASIC18.98■□□□□ 0.63
HLA-DQB2P05538 CBLN1-202ENST00000536749 718 ntAPPRIS P1 TSL 5 BASIC18.98■□□□□ 0.63
HLA-DQB2P05538 ACTG1-201ENST00000331925 1994 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
HLA-DQB2P05538 FDFT1-226ENST00000623368 2368 ntTSL 2 BASIC18.98■□□□□ 0.63
HLA-DQB2P05538 SNX17-201ENST00000233575 2044 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
HLA-DQB2P05538 AC012615.6-201ENST00000593201 1697 ntTSL 2 BASIC18.98■□□□□ 0.63
HLA-DQB2P05538 HOXC10-201ENST00000303460 1936 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
HLA-DQB2P05538 AC018755.2-202ENST00000429354 1926 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
HLA-DQB2P05538 SEMA6C-210ENST00000621728 1918 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
HLA-DQB2P05538 CD164L2-202ENST00000374027 1457 ntAPPRIS P3 TSL 1 (best) BASIC18.97■□□□□ 0.63
HLA-DQB2P05538 TOX2-205ENST00000423191 1709 ntTSL 2 BASIC18.97■□□□□ 0.63
HLA-DQB2P05538 AK3-202ENST00000381809 2736 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Retrieved 100 of 98,524 protein–RNA pairs in 32 ms