Protein–RNA interactions for Protein: P01906

HLA-DQA2, HLA class II histocompatibility antigen, DQ alpha 2 chain, humanhuman

Predictions only

Length 255 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQA2P01906 PSRC1-202ENST00000369904 1584 ntAPPRIS ALT2 TSL 1 (best) BASIC16.86■□□□□ 0.29
HLA-DQA2P01906 AC093525.10-201ENST00000625130 1569 ntBASIC16.86■□□□□ 0.29
HLA-DQA2P01906 SLC2A11-204ENST00000398356 2388 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
HLA-DQA2P01906 NECTIN3-206ENST00000485303 3664 ntAPPRIS P3 TSL 1 (best) BASIC16.86■□□□□ 0.29
HLA-DQA2P01906 NUP50-AS1-201ENST00000426282 2076 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
HLA-DQA2P01906 PLCB1-201ENST00000338037 7092 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
HLA-DQA2P01906 SNX4-201ENST00000251775 2513 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
HLA-DQA2P01906 SLC6A18-201ENST00000324642 2121 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
HLA-DQA2P01906 PRSS57-201ENST00000329267 1025 ntAPPRIS ALT2 TSL 1 (best) BASIC16.86■□□□□ 0.29
HLA-DQA2P01906 LINC02531-201ENST00000404689 593 ntTSL 5 BASIC16.86■□□□□ 0.29
HLA-DQA2P01906 YWHAZ-209ENST00000419477 891 ntAPPRIS P1 TSL 3 BASIC16.86■□□□□ 0.29
HLA-DQA2P01906 KRT16P5-201ENST00000455284 522 ntBASIC16.86■□□□□ 0.29
HLA-DQA2P01906 TMEM9-209ENST00000485839 938 ntAPPRIS P3 TSL 2 BASIC16.86■□□□□ 0.29
HLA-DQA2P01906 THAP6-213ENST00000514480 1161 ntAPPRIS P3 TSL 1 (best) BASIC16.86■□□□□ 0.29
HLA-DQA2P01906 LY6E-205ENST00000519611 635 ntTSL 3 BASIC16.86■□□□□ 0.29
HLA-DQA2P01906 LY6E-212ENST00000522024 868 ntAPPRIS P2 TSL 5 BASIC16.86■□□□□ 0.29
HLA-DQA2P01906 AC027451.1-201ENST00000530667 553 ntTSL 4 BASIC16.86■□□□□ 0.29
HLA-DQA2P01906 ICAM2-207ENST00000579687 1154 ntAPPRIS P1 TSL 3 BASIC16.86■□□□□ 0.29
HLA-DQA2P01906 PRSS57-202ENST00000613411 1090 ntAPPRIS P3 TSL 1 (best) BASIC16.86■□□□□ 0.29
HLA-DQA2P01906 PSMD3-201ENST00000264639 2158 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
HLA-DQA2P01906 NFIC-211ENST00000641145 8399 ntBASIC16.86■□□□□ 0.29
HLA-DQA2P01906 MRPL4-202ENST00000307422 1320 ntAPPRIS P2 TSL 5 BASIC16.86■□□□□ 0.29
HLA-DQA2P01906 SSC4D-201ENST00000275560 2801 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
HLA-DQA2P01906 FOXI3-201ENST00000428390 2804 ntAPPRIS P1 TSL 3 BASIC16.86■□□□□ 0.29
HLA-DQA2P01906 TPPP3-204ENST00000562206 1410 ntAPPRIS P1 TSL 2 BASIC16.86■□□□□ 0.29
HLA-DQA2P01906 SH3BP1-201ENST00000357436 2852 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
HLA-DQA2P01906 NR1H2-210ENST00000598168 1915 ntAPPRIS ALT2 TSL 5 BASIC16.86■□□□□ 0.29
HLA-DQA2P01906 GAS2L1P1-201ENST00000420145 1480 ntBASIC16.86■□□□□ 0.29
HLA-DQA2P01906 MTCL1-205ENST00000517570 6009 ntAPPRIS ALT2 TSL 1 (best) BASIC16.86■□□□□ 0.29
HLA-DQA2P01906 CNIH3-201ENST00000272133 2558 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
HLA-DQA2P01906 ADARB1-202ENST00000360697 6604 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
HLA-DQA2P01906 RBFOX1-204ENST00000422070 1684 ntTSL 2 BASIC16.85■□□□□ 0.29
HLA-DQA2P01906 NSMAF-202ENST00000427130 3371 ntTSL 2 BASIC16.85■□□□□ 0.29
HLA-DQA2P01906 RAPGEF5-203ENST00000405243 2800 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
HLA-DQA2P01906 PARS2-201ENST00000371279 2347 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
HLA-DQA2P01906 ZFC3H1-206ENST00000548100 1771 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
HLA-DQA2P01906 AMMECR1-201ENST00000262844 5504 ntAPPRIS P3 TSL 1 (best) BASIC16.85■□□□□ 0.29
HLA-DQA2P01906 ANXA8L1-203ENST00000613703 1874 ntTSL 2 BASIC16.85■□□□□ 0.29
HLA-DQA2P01906 SGCB-201ENST00000381431 4431 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
HLA-DQA2P01906 PMAIP1-201ENST00000269518 1262 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
HLA-DQA2P01906 TSPY8-201ENST00000287721 1161 ntAPPRIS P5 TSL 1 (best) BASIC16.85■□□□□ 0.29
HLA-DQA2P01906 MRPL12-201ENST00000333676 1028 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
HLA-DQA2P01906 TSPY10-201ENST00000428845 1161 ntAPPRIS P5 TSL 1 (best) BASIC16.85■□□□□ 0.29
HLA-DQA2P01906 AC005056.1-201ENST00000435932 532 ntTSL 4 BASIC16.85■□□□□ 0.29
HLA-DQA2P01906 TSPY23P-201ENST00000440136 739 ntBASIC16.85■□□□□ 0.29
HLA-DQA2P01906 TSPY3-203ENST00000457222 1161 ntAPPRIS P5 TSL 1 (best) BASIC16.85■□□□□ 0.29
HLA-DQA2P01906 TRAPPC5-203ENST00000595985 411 ntTSL 3 BASIC16.85■□□□□ 0.29
HLA-DQA2P01906 AL158152.2-201ENST00000602703 235 ntTSL 3 BASIC16.85■□□□□ 0.29
HLA-DQA2P01906 TMEM191B-203ENST00000613597 366 ntAPPRIS ALT2 TSL 5 BASIC16.85■□□□□ 0.29
HLA-DQA2P01906 TSGA10IP-203ENST00000532620 1925 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
HLA-DQA2P01906 SLC1A4-201ENST00000234256 4561 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
HLA-DQA2P01906 P2RX5-203ENST00000547178 1998 ntAPPRIS ALT2 TSL 1 (best) BASIC16.85■□□□□ 0.29
HLA-DQA2P01906 TJP1-201ENST00000346128 7950 ntAPPRIS P3 TSL 1 (best) BASIC16.85■□□□□ 0.29
HLA-DQA2P01906 IGFBP4-201ENST00000269593 2200 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
HLA-DQA2P01906 ADK-206ENST00000541550 2222 ntTSL 2 BASIC16.85■□□□□ 0.29
HLA-DQA2P01906 RAB4A-201ENST00000366690 2966 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
HLA-DQA2P01906 CD72-201ENST00000259633 1548 ntAPPRIS P2 TSL 1 (best) BASIC16.85■□□□□ 0.29
HLA-DQA2P01906 HDAC11-221ENST00000522202 1559 ntAPPRIS ALT2 TSL 2 BASIC16.85■□□□□ 0.29
HLA-DQA2P01906 LRRC36-201ENST00000329956 2395 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
HLA-DQA2P01906 TEKT5-201ENST00000283025 1612 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
HLA-DQA2P01906 ANKRD29-201ENST00000322980 1658 ntTSL 2 BASIC16.85■□□□□ 0.29
HLA-DQA2P01906 GABBR1-202ENST00000376977 1739 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
HLA-DQA2P01906 MTSS1-203ENST00000431961 1711 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
HLA-DQA2P01906 ZNF668-202ENST00000394983 2717 ntAPPRIS P1 TSL 5 BASIC16.84■□□□□ 0.29
HLA-DQA2P01906 IGF2-205ENST00000416167 5585 ntAPPRIS P2 TSL 1 (best) BASIC16.84■□□□□ 0.29
HLA-DQA2P01906 UNG-202ENST00000336865 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
HLA-DQA2P01906 ANKS3-202ENST00000446014 2265 ntTSL 5 BASIC16.84■□□□□ 0.29
HLA-DQA2P01906 FAM90A1-201ENST00000307435 2342 ntAPPRIS P1 TSL 2 BASIC16.84■□□□□ 0.29
HLA-DQA2P01906 LRRC3-201ENST00000291592 5869 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
HLA-DQA2P01906 SHISA5-220ENST00000619810 2385 ntTSL 2 BASIC16.84■□□□□ 0.29
HLA-DQA2P01906 AC009113.1-201ENST00000570267 2443 ntBASIC16.84■□□□□ 0.29
HLA-DQA2P01906 SLAIN2-201ENST00000264313 6299 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
HLA-DQA2P01906 CNOT6-207ENST00000618123 6250 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
HLA-DQA2P01906 OLFM1-202ENST00000277415 1014 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
HLA-DQA2P01906 RPP25L-201ENST00000297613 1092 ntAPPRIS P1 TSL 2 BASIC16.84■□□□□ 0.29
HLA-DQA2P01906 BID-202ENST00000342111 854 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
HLA-DQA2P01906 CLTA-202ENST00000345519 1073 ntAPPRIS ALT1 TSL 1 (best) BASIC16.84■□□□□ 0.29
HLA-DQA2P01906 NME6-209ENST00000442597 757 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
HLA-DQA2P01906 CCDC124-201ENST00000445755 938 ntAPPRIS P1 TSL 2 BASIC16.84■□□□□ 0.29
HLA-DQA2P01906 Z98884.1-201ENST00000451646 830 ntTSL 3 BASIC16.84■□□□□ 0.29
HLA-DQA2P01906 AL359399.1-201ENST00000557610 462 ntTSL 3 BASIC16.84■□□□□ 0.29
HLA-DQA2P01906 AC022167.3-201ENST00000564485 427 ntTSL 2 BASIC16.84■□□□□ 0.29
HLA-DQA2P01906 AC009052.1-201ENST00000567090 298 ntTSL 3 BASIC16.84■□□□□ 0.29
HLA-DQA2P01906 CCDC124-203ENST00000597436 1055 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
HLA-DQA2P01906 FXYD3-214ENST00000605677 633 ntTSL 2 BASIC16.84■□□□□ 0.29
HLA-DQA2P01906 AC018445.1-201ENST00000621571 568 ntTSL 4 BASIC16.84■□□□□ 0.29
HLA-DQA2P01906 NPTX2-201ENST00000265634 2700 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
HLA-DQA2P01906 SOX15-201ENST00000250055 1396 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
HLA-DQA2P01906 ZNF302-206ENST00000505242 2849 ntAPPRIS P3 TSL 1 (best) BASIC16.84■□□□□ 0.29
HLA-DQA2P01906 MAPKAPK2-202ENST00000367103 2961 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
HLA-DQA2P01906 CYP46A1-202ENST00000380228 1597 ntTSL 2 BASIC16.84■□□□□ 0.29
HLA-DQA2P01906 BICD2-201ENST00000356884 6427 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
HLA-DQA2P01906 TP53I3-202ENST00000335934 1635 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
HLA-DQA2P01906 ABHD14B-202ENST00000361143 1636 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
HLA-DQA2P01906 CACNA1G-206ENST00000416767 4899 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
HLA-DQA2P01906 TMEM74-201ENST00000297459 1741 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
HLA-DQA2P01906 KCNH1-210ENST00000640044 1818 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
HLA-DQA2P01906 DCAKD-208ENST00000614054 2054 ntAPPRIS P1 TSL 2 BASIC16.84■□□□□ 0.29
HLA-DQA2P01906 CPEB2-207ENST00000507071 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
HLA-DQA2P01906 HECTD2-204ENST00000446394 4939 ntTSL 2 BASIC16.84■□□□□ 0.29
Retrieved 100 of 98,524 protein–RNA pairs in 45.6 ms