Protein–RNA interactions for Protein: P01574

IFNB1, Interferon beta, humanhuman

Predictions only

Length 187 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IFNB1P01574 AC006504.5-207ENST00000586220 487 ntTSL 2 BASIC19.43■□□□□ 0.7
IFNB1P01574 FAM32A-205ENST00000589852 1168 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
IFNB1P01574 AC124016.1-201ENST00000609552 612 ntBASIC19.43■□□□□ 0.7
IFNB1P01574 ARID3A-201ENST00000263620 5941 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
IFNB1P01574 MAP4K4-202ENST00000324219 7526 ntTSL 5 BASIC19.43■□□□□ 0.7
IFNB1P01574 BACE1-203ENST00000428381 1333 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
IFNB1P01574 AK4-208ENST00000546702 1335 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
IFNB1P01574 EP300-201ENST00000263253 9587 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
IFNB1P01574 NCK1-207ENST00000481752 1971 ntAPPRIS P1 TSL 5 BASIC19.43■□□□□ 0.7
IFNB1P01574 ISLR2-201ENST00000361742 4817 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
IFNB1P01574 SLC47A2-201ENST00000325411 2258 ntAPPRIS P3 TSL 1 (best) BASIC19.42■□□□□ 0.7
IFNB1P01574 SH3BP2-202ENST00000435136 2318 ntAPPRIS P3 TSL 2 BASIC19.42■□□□□ 0.7
IFNB1P01574 SNAI3-AS1-205ENST00000568633 2096 ntBASIC19.42■□□□□ 0.7
IFNB1P01574 ELL2-201ENST00000237853 6046 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
IFNB1P01574 PSPC1-201ENST00000338910 2407 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
IFNB1P01574 STOML1-209ENST00000564777 1849 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
IFNB1P01574 ZHX3-212ENST00000558993 1528 ntTSL 5 BASIC19.42■□□□□ 0.7
IFNB1P01574 CMTM7-202ENST00000349718 1214 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
IFNB1P01574 AL162258.1-201ENST00000497086 753 ntTSL 2 BASIC19.42■□□□□ 0.7
IFNB1P01574 CDIPT-204ENST00000563415 1047 ntTSL 3 BASIC19.42■□□□□ 0.7
IFNB1P01574 AC010336.4-201ENST00000595655 438 ntTSL 5 BASIC19.42■□□□□ 0.7
IFNB1P01574 BAG3-201ENST00000369085 2571 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
IFNB1P01574 SEMA3C-201ENST00000265361 5174 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
IFNB1P01574 WNT10B-201ENST00000301061 2274 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
IFNB1P01574 RFC2-213ENST00000621097 1635 ntTSL 5 BASIC19.42■□□□□ 0.7
IFNB1P01574 LRRC23-201ENST00000007969 1615 ntAPPRIS P4 TSL 1 (best) BASIC19.42■□□□□ 0.7
IFNB1P01574 TRIM73-202ENST00000430211 1321 ntAPPRIS ALT2 TSL 2 BASIC19.42■□□□□ 0.7
IFNB1P01574 PTGER3-201ENST00000306666 2333 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
IFNB1P01574 MATN4-201ENST00000353917 1657 ntTSL 5 BASIC19.42■□□□□ 0.7
IFNB1P01574 SAMD11-210ENST00000616016 2391 ntTSL 5 BASIC19.42■□□□□ 0.7
IFNB1P01574 SAMD11-215ENST00000618779 2368 ntAPPRIS ALT2 TSL 5 BASIC19.42■□□□□ 0.7
IFNB1P01574 CSF1-203ENST00000369801 1364 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
IFNB1P01574 RNASET2-214ENST00000620173 1391 ntTSL 5 BASIC19.42■□□□□ 0.7
IFNB1P01574 WNT8B-201ENST00000343737 2112 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
IFNB1P01574 AC126763.1-201ENST00000552015 2118 ntBASIC19.42■□□□□ 0.7
IFNB1P01574 CLEC10A-201ENST00000254868 1797 ntAPPRIS P3 TSL 1 (best) BASIC19.42■□□□□ 0.7
IFNB1P01574 AMDHD2-201ENST00000293971 1459 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
IFNB1P01574 NECTIN3-211ENST00000493615 1876 ntAPPRIS ALT2 TSL 2 BASIC19.41■□□□□ 0.7
IFNB1P01574 CCDC177-201ENST00000599174 4131 ntAPPRIS P1 TSL 3 BASIC19.41■□□□□ 0.7
IFNB1P01574 KLC1-217ENST00000554280 2426 ntTSL 5 BASIC19.41■□□□□ 0.7
IFNB1P01574 ADCY9-201ENST00000294016 7725 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
IFNB1P01574 PRKAR1B-212ENST00000544935 2494 ntAPPRIS P1 TSL 5 BASIC19.41■□□□□ 0.7
IFNB1P01574 FAM131A-204ENST00000418281 1664 ntTSL 5 BASIC19.41■□□□□ 0.7
IFNB1P01574 OLFM1-202ENST00000277415 1014 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
IFNB1P01574 MRGPRG-201ENST00000332314 870 ntAPPRIS P1 BASIC19.41■□□□□ 0.7
IFNB1P01574 CCDC107-206ENST00000426546 1242 ntAPPRIS P3 TSL 1 (best) BASIC19.41■□□□□ 0.7
IFNB1P01574 AL359747.1-201ENST00000442370 536 ntTSL 2 BASIC19.41■□□□□ 0.7
IFNB1P01574 LRRC75A-AS1-205ENST00000475953 1201 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
IFNB1P01574 ATP6V0E1-204ENST00000519911 718 ntTSL 2 BASIC19.41■□□□□ 0.7
IFNB1P01574 FBXO17-202ENST00000595329 1299 ntAPPRIS P1 TSL 2 BASIC19.41■□□□□ 0.7
IFNB1P01574 AC110285.5-201ENST00000611501 352 ntBASIC19.41■□□□□ 0.7
IFNB1P01574 RELL2-202ENST00000444782 2154 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
IFNB1P01574 CLN8-211ENST00000636934 1790 ntTSL 5 BASIC19.41■□□□□ 0.7
IFNB1P01574 ISL2-201ENST00000290759 1881 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
IFNB1P01574 AC114490.1-202ENST00000311990 1887 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
IFNB1P01574 BAIAP2-203ENST00000416299 1442 ntTSL 2 BASIC19.41■□□□□ 0.7
IFNB1P01574 FCMR-202ENST00000442471 1441 ntTSL 2 BASIC19.41■□□□□ 0.7
IFNB1P01574 PLCH2-203ENST00000378486 4837 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
IFNB1P01574 PLCH2-204ENST00000419816 4837 ntAPPRIS P1 TSL 5 BASIC19.41■□□□□ 0.7
IFNB1P01574 KATNBL1P6-202ENST00000562413 1466 ntBASIC19.41■□□□□ 0.7
IFNB1P01574 PGR-201ENST00000263463 2496 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
IFNB1P01574 FST-201ENST00000256759 2519 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
IFNB1P01574 PLAUR-203ENST00000340093 1548 ntAPPRIS P3 TSL 1 (best) BASIC19.41■□□□□ 0.7
IFNB1P01574 TUBA4A-201ENST00000248437 2162 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
IFNB1P01574 CCDC17-209ENST00000528266 2181 ntAPPRIS P3 TSL 2 BASIC19.4■□□□□ 0.7
IFNB1P01574 KANK3-201ENST00000330915 2787 ntAPPRIS P2 TSL 1 (best) BASIC19.4■□□□□ 0.7
IFNB1P01574 ACSF2-201ENST00000300441 2235 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
IFNB1P01574 PNKP-207ENST00000596014 1665 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
IFNB1P01574 KIAA1522-202ENST00000373480 5294 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
IFNB1P01574 KIAA1522-203ENST00000373481 5293 ntAPPRIS ALT2 TSL 2 BASIC19.4■□□□□ 0.7
IFNB1P01574 AP5S1-202ENST00000379567 1791 ntAPPRIS P1 TSL 2 BASIC19.4■□□□□ 0.7
IFNB1P01574 EFTUD1P1-204ENST00000560401 1798 ntBASIC19.4■□□□□ 0.7
IFNB1P01574 MMD2-202ENST00000404774 2415 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
IFNB1P01574 MCCC1-214ENST00000610757 2410 ntTSL 5 BASIC19.4■□□□□ 0.7
IFNB1P01574 CELF2-217ENST00000638035 1849 ntAPPRIS P3 TSL 5 BASIC19.4■□□□□ 0.7
IFNB1P01574 KRTCAP3-201ENST00000288873 872 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
IFNB1P01574 ISG20-202ENST00000379224 540 ntTSL 3 BASIC19.4■□□□□ 0.7
IFNB1P01574 CCT7-202ENST00000398422 1234 ntTSL 2 BASIC19.4■□□□□ 0.7
IFNB1P01574 MIR1302-2HG-202ENST00000473358 712 ntTSL 5 BASIC19.4■□□□□ 0.7
IFNB1P01574 AC027451.1-201ENST00000530667 553 ntTSL 4 BASIC19.4■□□□□ 0.7
IFNB1P01574 TESC-AS1-201ENST00000547006 1053 ntTSL 2 BASIC19.4■□□□□ 0.7
IFNB1P01574 AC140725.1-202ENST00000561145 712 ntTSL 5 BASIC19.4■□□□□ 0.7
IFNB1P01574 AC006058.3-201ENST00000606217 1069 ntBASIC19.4■□□□□ 0.7
IFNB1P01574 AL445675.2-201ENST00000620291 557 ntBASIC19.4■□□□□ 0.7
IFNB1P01574 AC073648.6-201ENST00000641589 218 ntBASIC19.4■□□□□ 0.7
IFNB1P01574 L1CAM-205ENST00000370060 5113 ntAPPRIS P4 TSL 5 BASIC19.4■□□□□ 0.7
IFNB1P01574 PJA1-202ENST00000374571 2672 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
IFNB1P01574 ADAMTS7-201ENST00000388820 5490 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
IFNB1P01574 EDA-208ENST00000524573 1381 ntAPPRIS ALT1 TSL 1 (best) BASIC19.4■□□□□ 0.7
IFNB1P01574 STIM2-202ENST00000465503 3613 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
IFNB1P01574 NXNL2-202ENST00000375855 1457 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
IFNB1P01574 RCC2P6-201ENST00000526625 1557 ntBASIC19.4■□□□□ 0.7
IFNB1P01574 ENC1-201ENST00000302351 5520 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
IFNB1P01574 KLHL31-201ENST00000370905 5743 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
IFNB1P01574 TNFSF9-201ENST00000245817 1665 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
IFNB1P01574 PRRT1-202ENST00000375150 1726 ntTSL 1 (best) BASIC19.39■□□□□ 0.7
IFNB1P01574 BICD1-207ENST00000551848 1962 ntBASIC19.39■□□□□ 0.7
IFNB1P01574 CTSD-212ENST00000637815 2003 ntAPPRIS ALT2 TSL 5 BASIC19.39■□□□□ 0.69
IFNB1P01574 UBE2O-201ENST00000319380 5436 ntAPPRIS P2 TSL 1 (best) BASIC19.39■□□□□ 0.69
IFNB1P01574 NCOA6-207ENST00000616167 3271 ntAPPRIS ALT2 TSL 5 BASIC19.39■□□□□ 0.69
Retrieved 100 of 98,524 protein–RNA pairs in 21.7 ms