Protein–RNA interactions for Protein: O95475

SIX6, Homeobox protein SIX6, humanhuman

Predictions only

Length 246 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIX6O95475 NAA60-235ENST00000576916 1567 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
SIX6O95475 GALK1-201ENST00000225614 1445 ntAPPRIS P1 TSL 2 BASIC15.72■□□□□ 0.11
SIX6O95475 HLA-G-201ENST00000360323 1427 ntAPPRIS P2 BASIC15.72■□□□□ 0.11
SIX6O95475 SMCHD1-201ENST00000320876 8821 ntAPPRIS P1 TSL 5 BASIC15.72■□□□□ 0.11
SIX6O95475 TNIP1-211ENST00000521591 2274 ntAPPRIS P3 TSL 1 (best) BASIC15.72■□□□□ 0.11
SIX6O95475 MSLNL-201ENST00000442466 2109 ntAPPRIS P1 TSL 5 BASIC15.72■□□□□ 0.11
SIX6O95475 NRL-205ENST00000560550 788 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
SIX6O95475 AC104564.5-201ENST00000584986 278 ntTSL 3 BASIC15.72■□□□□ 0.11
SIX6O95475 MIR663AHG-233ENST00000609248 830 ntTSL 5 BASIC15.72■□□□□ 0.11
SIX6O95475 SMPD3-211ENST00000568373 2073 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
SIX6O95475 KBTBD13-201ENST00000432196 1377 ntAPPRIS P1 BASIC15.72■□□□□ 0.11
SIX6O95475 GAS2L1P2-201ENST00000436355 1356 ntBASIC15.72■□□□□ 0.11
SIX6O95475 CBWD5-204ENST00000377392 2863 ntTSL 2 BASIC15.72■□□□□ 0.11
SIX6O95475 PITPNM2-209ENST00000546049 1793 ntTSL 5 BASIC15.72■□□□□ 0.11
SIX6O95475 TMEM235-203ENST00000550981 1786 ntTSL 2 BASIC15.72■□□□□ 0.11
SIX6O95475 TTLL11-201ENST00000321582 3250 ntAPPRIS P1 TSL 5 BASIC15.72■□□□□ 0.11
SIX6O95475 RGS3-211ENST00000462403 2155 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
SIX6O95475 ADRB3-201ENST00000345060 2950 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
SIX6O95475 NEU1-206ENST00000375631 2045 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
SIX6O95475 APOA5-201ENST00000227665 1897 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
SIX6O95475 GPD2-201ENST00000310454 6041 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
SIX6O95475 CERCAM-201ENST00000372838 2685 ntAPPRIS P3 TSL 1 (best) BASIC15.71■□□□□ 0.11
SIX6O95475 DBN1-201ENST00000292385 3072 ntAPPRIS P4 TSL 1 (best) BASIC15.71■□□□□ 0.11
SIX6O95475 CENPH-206ENST00000515001 1305 ntTSL 2 BASIC15.71■□□□□ 0.11
SIX6O95475 ADRB1-201ENST00000369295 2853 ntAPPRIS P1 BASIC15.71■□□□□ 0.11
SIX6O95475 KCNK17-201ENST00000373231 1658 ntAPPRIS P3 TSL 1 (best) BASIC15.71■□□□□ 0.11
SIX6O95475 DCAF12L2-201ENST00000360028 2599 ntAPPRIS P1 BASIC15.71■□□□□ 0.11
SIX6O95475 DKC1-201ENST00000369550 2577 ntAPPRIS P3 TSL 1 (best) BASIC15.71■□□□□ 0.11
SIX6O95475 MIOS-202ENST00000405785 3095 ntAPPRIS P1 TSL 5 BASIC15.71■□□□□ 0.11
SIX6O95475 ASXL1-212ENST00000620121 5374 ntAPPRIS ALT2 TSL 5 BASIC15.71■□□□□ 0.11
SIX6O95475 IL20RA-202ENST00000367746 1244 ntTSL 2 BASIC15.71■□□□□ 0.11
SIX6O95475 EBPL-204ENST00000378272 766 ntTSL 3 BASIC15.71■□□□□ 0.11
SIX6O95475 CDC37L1-202ENST00000381858 1244 ntTSL 5 BASIC15.71■□□□□ 0.11
SIX6O95475 NRL-201ENST00000396995 810 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
SIX6O95475 RAMP1-203ENST00000404910 857 ntTSL 2 BASIC15.71■□□□□ 0.11
SIX6O95475 MAST4-206ENST00000406374 1066 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
SIX6O95475 AC093627.4-202ENST00000479592 591 ntTSL 4 BASIC15.71■□□□□ 0.11
SIX6O95475 ARHGEF28-214ENST00000545377 6351 ntAPPRIS P3 TSL 5 BASIC15.71■□□□□ 0.11
SIX6O95475 AC092902.2-206ENST00000625484 846 ntTSL 5 BASIC15.71■□□□□ 0.11
SIX6O95475 AL035685.1-201ENST00000636663 812 ntBASIC15.71■□□□□ 0.11
SIX6O95475 KREMEN2-206ENST00000575885 1798 ntTSL 2 BASIC15.71■□□□□ 0.11
SIX6O95475 GLUD1-201ENST00000277865 3039 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
SIX6O95475 PTEN-201ENST00000371953 9027 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
SIX6O95475 EXOC5-201ENST00000340918 2632 ntTSL 2 BASIC15.71■□□□□ 0.11
SIX6O95475 KLHL14-201ENST00000358095 1884 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
SIX6O95475 RBPJL-203ENST00000372743 1623 ntAPPRIS ALT1 TSL 1 (best) BASIC15.71■□□□□ 0.11
SIX6O95475 LENG8-202ENST00000376514 5146 ntAPPRIS ALT2 TSL 5 BASIC15.71■□□□□ 0.11
SIX6O95475 ACTN4-202ENST00000390009 2102 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
SIX6O95475 RBPJL-201ENST00000343694 2489 ntAPPRIS P3 TSL 1 (best) BASIC15.71■□□□□ 0.1
SIX6O95475 C8orf34-206ENST00000518698 2223 ntAPPRIS P2 TSL 2 BASIC15.71■□□□□ 0.1
SIX6O95475 FNBP1-201ENST00000355681 1977 ntTSL 2 BASIC15.71■□□□□ 0.1
SIX6O95475 GRAMD1A-211ENST00000599564 2825 ntTSL 5 BASIC15.71■□□□□ 0.1
SIX6O95475 ISM1-201ENST00000262487 2593 ntAPPRIS P1 TSL 5 BASIC15.71■□□□□ 0.1
SIX6O95475 HCK-202ENST00000375852 2082 ntAPPRIS ALT2 TSL 1 (best) BASIC15.71■□□□□ 0.1
SIX6O95475 C8orf33-201ENST00000331434 2677 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.1
SIX6O95475 TCAF2-203ENST00000425618 2448 ntTSL 2 BASIC15.7■□□□□ 0.1
SIX6O95475 GDPD5-214ENST00000533784 2441 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
SIX6O95475 AC116351.2-201ENST00000606540 1585 ntBASIC15.7■□□□□ 0.1
SIX6O95475 FAM120AOS-201ENST00000375412 2771 ntAPPRIS P3 TSL 1 (best) BASIC15.7■□□□□ 0.1
SIX6O95475 TSPAN15-201ENST00000373290 1698 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
SIX6O95475 CYP2W1-202ENST00000340150 2361 ntTSL 2 BASIC15.7■□□□□ 0.1
SIX6O95475 AC063977.6-201ENST00000600074 1763 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
SIX6O95475 NARFL-201ENST00000251588 2112 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
SIX6O95475 TACC1-202ENST00000317827 7802 ntAPPRIS P3 TSL 1 (best) BASIC15.7■□□□□ 0.1
SIX6O95475 FTCDNL1-204ENST00000622774 1997 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
SIX6O95475 CLTB-201ENST00000310418 1215 ntAPPRIS P4 TSL 1 (best) BASIC15.7■□□□□ 0.1
SIX6O95475 CLTB-202ENST00000345807 1161 ntAPPRIS ALT1 TSL 1 (best) BASIC15.7■□□□□ 0.1
SIX6O95475 RBP4-201ENST00000371464 1068 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
SIX6O95475 AL356441.2-201ENST00000443009 864 ntBASIC15.7■□□□□ 0.1
SIX6O95475 NEURL1B-203ENST00000522853 1263 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
SIX6O95475 AL137779.2-201ENST00000554859 448 ntTSL 2 BASIC15.7■□□□□ 0.1
SIX6O95475 UCHL5-206ENST00000367455 5327 ntAPPRIS P3 TSL 1 (best) BASIC15.7■□□□□ 0.1
SIX6O95475 LIFR-202ENST00000453190 4253 ntAPPRIS P1 TSL 2 BASIC15.7■□□□□ 0.1
SIX6O95475 C1orf56-201ENST00000368926 2096 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
SIX6O95475 SNAI3-AS1-205ENST00000568633 2096 ntBASIC15.7■□□□□ 0.1
SIX6O95475 AZU1-202ENST00000592205 1713 ntTSL 2 BASIC15.7■□□□□ 0.1
SIX6O95475 AC022211.2-201ENST00000585075 2527 ntBASIC15.7■□□□□ 0.1
SIX6O95475 SGPP1-201ENST00000247225 3312 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
SIX6O95475 ARAP1-AS2-201ENST00000500163 1824 ntTSL 2 BASIC15.7■□□□□ 0.1
SIX6O95475 ACY1-201ENST00000404366 1473 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
SIX6O95475 STOX1-204ENST00000399169 3281 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
SIX6O95475 NOL4L-205ENST00000375678 2042 ntAPPRIS ALT2 TSL 2 BASIC15.7■□□□□ 0.1
SIX6O95475 BRPF1-201ENST00000383829 4736 ntAPPRIS ALT1 TSL 1 (best) BASIC15.7■□□□□ 0.1
SIX6O95475 AC090206.1-201ENST00000615734 1678 ntTSL 5 BASIC15.7■□□□□ 0.1
SIX6O95475 MALT1-202ENST00000348428 9368 ntAPPRIS P4 TSL 1 (best) BASIC15.7■□□□□ 0.1
SIX6O95475 SCAMP4-201ENST00000316097 2684 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
SIX6O95475 VSIG10L2-202ENST00000638636 2304 ntAPPRIS P1 TSL 5 BASIC15.69■□□□□ 0.1
SIX6O95475 EEF1D-225ENST00000529272 1311 ntAPPRIS ALT2 TSL 2 BASIC15.69■□□□□ 0.1
SIX6O95475 GOSR2-210ENST00000576910 1891 ntAPPRIS ALT1 TSL 5 BASIC15.69■□□□□ 0.1
SIX6O95475 VSX2-201ENST00000261980 2995 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
SIX6O95475 GDE1-201ENST00000353258 2958 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
SIX6O95475 DBNDD2-203ENST00000372710 1417 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
SIX6O95475 DLC1-203ENST00000358919 4392 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
SIX6O95475 NTRK1-202ENST00000368196 2701 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
SIX6O95475 DPYSL4-202ENST00000368627 1545 ntTSL 5 BASIC15.69■□□□□ 0.1
SIX6O95475 HNF1B-202ENST00000614313 1819 ntTSL 5 BASIC15.69■□□□□ 0.1
SIX6O95475 HNF1B-203ENST00000617272 1820 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
SIX6O95475 JMJD4-201ENST00000366758 2595 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
SIX6O95475 LRRC58-201ENST00000295628 7903 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
SIX6O95475 CHTOP-205ENST00000403433 1923 ntAPPRIS ALT2 TSL 5 BASIC15.69■□□□□ 0.1
Retrieved 100 of 98,524 protein–RNA pairs in 38.8 ms