Protein–RNA interactions for Protein: O75427

LRCH4, Leucine-rich repeat and calponin homology domain-containing protein 4, humanhuman

Predictions only

Length 683 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH4O75427 INTS10-201ENST00000397977 2804 ntAPPRIS P1 TSL 2 BASIC19.53■□□□□ 0.72
LRCH4O75427 KCNMA1-293ENST00000640969 5789 ntAPPRIS ALT2 TSL 5 BASIC19.53■□□□□ 0.72
LRCH4O75427 LYPD3-201ENST00000244333 1694 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
LRCH4O75427 CDK4-202ENST00000312990 1650 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
LRCH4O75427 NAPRT-202ENST00000426292 1654 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
LRCH4O75427 TWIST2-202ENST00000612363 1404 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
LRCH4O75427 SRMS-201ENST00000217188 1516 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
LRCH4O75427 SAAL1-201ENST00000300013 1518 ntAPPRIS ALT1 TSL 2 BASIC19.53■□□□□ 0.72
LRCH4O75427 RHOC-203ENST00000369632 1026 ntAPPRIS P1 TSL 3 BASIC19.53■□□□□ 0.72
LRCH4O75427 ID1-202ENST00000376112 994 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
LRCH4O75427 PMEPA1-204ENST00000395814 800 ntTSL 3 BASIC19.53■□□□□ 0.72
LRCH4O75427 HDAC11-203ENST00000402271 1018 ntTSL 3 BASIC19.53■□□□□ 0.72
LRCH4O75427 AL023284.2-201ENST00000405850 579 ntBASIC19.53■□□□□ 0.72
LRCH4O75427 LINC00620-201ENST00000419618 996 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
LRCH4O75427 METTL21A-206ENST00000432416 869 ntTSL 3 BASIC19.53■□□□□ 0.72
LRCH4O75427 EVX1-202ENST00000496902 2955 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
LRCH4O75427 AC093827.2-201ENST00000512654 315 ntBASIC19.53■□□□□ 0.72
LRCH4O75427 CDC42EP2-202ENST00000533419 1279 ntAPPRIS P1 TSL 3 BASIC19.53■□□□□ 0.72
LRCH4O75427 AP005263.1-201ENST00000579126 914 ntTSL 2 BASIC19.53■□□□□ 0.72
LRCH4O75427 AC008763.3-201ENST00000597959 777 ntAPPRIS P1 TSL 4 BASIC19.53■□□□□ 0.72
LRCH4O75427 TH-205ENST00000381175 1898 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
LRCH4O75427 POLR3E-209ENST00000564209 2464 ntTSL 2 BASIC19.53■□□□□ 0.72
LRCH4O75427 SMN2-202ENST00000380742 1388 ntAPPRIS ALT2 TSL 5 BASIC19.53■□□□□ 0.72
LRCH4O75427 AP003774.1-201ENST00000316124 2340 ntTSL 2 BASIC19.53■□□□□ 0.72
LRCH4O75427 MRPL3-202ENST00000425847 1457 ntTSL 2 BASIC19.53■□□□□ 0.72
LRCH4O75427 RHOBTB2-201ENST00000251822 5451 ntAPPRIS P3 TSL 1 (best) BASIC19.53■□□□□ 0.72
LRCH4O75427 COL15A1-201ENST00000375001 5496 ntAPPRIS P2 TSL 1 (best) BASIC19.53■□□□□ 0.72
LRCH4O75427 PRPF39-201ENST00000355765 2868 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
LRCH4O75427 SERPINF2-201ENST00000324015 2284 ntAPPRIS P1 TSL 5 BASIC19.53■□□□□ 0.72
LRCH4O75427 CNNM3-202ENST00000377060 3308 ntTSL 2 BASIC19.53■□□□□ 0.72
LRCH4O75427 NPTX2-201ENST00000265634 2700 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
LRCH4O75427 CHRAC1-201ENST00000220913 2488 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
LRCH4O75427 SERPINA4-201ENST00000298841 1784 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
LRCH4O75427 AP5S1-202ENST00000379567 1791 ntAPPRIS P1 TSL 2 BASIC19.52■□□□□ 0.72
LRCH4O75427 DUS1L-202ENST00000354321 2151 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
LRCH4O75427 BANP-202ENST00000355022 2164 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
LRCH4O75427 TFEB-203ENST00000358871 2188 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
LRCH4O75427 BX322234.1-201ENST00000444188 980 ntTSL 3 BASIC19.52■□□□□ 0.72
LRCH4O75427 UBL5-202ENST00000586895 432 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
LRCH4O75427 UBALD1-209ENST00000591897 1275 ntTSL 2 BASIC19.52■□□□□ 0.72
LRCH4O75427 AP000525.1-201ENST00000608286 694 ntBASIC19.52■□□□□ 0.72
LRCH4O75427 EXOSC3-201ENST00000327304 1806 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
LRCH4O75427 NF2-203ENST00000353887 1845 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
LRCH4O75427 CLN3-206ENST00000360019 1840 ntTSL 2 BASIC19.52■□□□□ 0.72
LRCH4O75427 ARHGAP9-202ENST00000393797 2912 ntAPPRIS ALT2 TSL 1 (best) BASIC19.52■□□□□ 0.72
LRCH4O75427 PROB1-201ENST00000434752 5122 ntAPPRIS P1 BASIC19.52■□□□□ 0.72
LRCH4O75427 ADGRD2-201ENST00000334810 3244 ntAPPRIS P1 TSL 5 BASIC19.52■□□□□ 0.72
LRCH4O75427 CCNJ-203ENST00000465148 2677 ntAPPRIS P1 TSL 2 BASIC19.52■□□□□ 0.72
LRCH4O75427 C5orf30-203ENST00000515669 1573 ntAPPRIS P1 TSL 3 BASIC19.52■□□□□ 0.71
LRCH4O75427 FBXO41-204ENST00000520530 3293 ntAPPRIS P1 TSL 5 BASIC19.52■□□□□ 0.71
LRCH4O75427 LZTS3-201ENST00000329152 5257 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.71
LRCH4O75427 SLC35A2-217ENST00000635589 1424 ntTSL 2 BASIC19.51■□□□□ 0.71
LRCH4O75427 CNIH3-201ENST00000272133 2558 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
LRCH4O75427 SNX17-201ENST00000233575 2044 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
LRCH4O75427 DIO3-201ENST00000510508 2102 ntAPPRIS P1 BASIC19.51■□□□□ 0.71
LRCH4O75427 AL445433.2-201ENST00000425113 2544 ntTSL 2 BASIC19.51■□□□□ 0.71
LRCH4O75427 PHOSPHO2-201ENST00000359744 1125 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
LRCH4O75427 ENSA-205ENST00000361532 792 ntTSL 2 BASIC19.51■□□□□ 0.71
LRCH4O75427 IGHMBP2-205ENST00000539224 785 ntTSL 3 BASIC19.51■□□□□ 0.71
LRCH4O75427 AL355075.4-201ENST00000554988 638 ntBASIC19.51■□□□□ 0.71
LRCH4O75427 FOXN3-AS1-201ENST00000555562 1077 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
LRCH4O75427 DET1-205ENST00000558413 583 ntTSL 4 BASIC19.51■□□□□ 0.71
LRCH4O75427 AC122129.2-201ENST00000583598 466 ntTSL 5 BASIC19.51■□□□□ 0.71
LRCH4O75427 AL158151.3-201ENST00000599172 696 ntTSL 5 BASIC19.51■□□□□ 0.71
LRCH4O75427 C16orf74-202ENST00000602583 1237 ntAPPRIS ALT2 TSL 1 (best) BASIC19.51■□□□□ 0.71
LRCH4O75427 SNX21-213ENST00000614929 587 ntTSL 5 BASIC19.51■□□□□ 0.71
LRCH4O75427 APIP-201ENST00000395787 1366 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
LRCH4O75427 EEF1AKMT2-201ENST00000368836 1462 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
LRCH4O75427 SLC2A14-214ENST00000542505 1650 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
LRCH4O75427 ASZ1-201ENST00000284629 1865 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
LRCH4O75427 SALRNA1-201ENST00000555871 2086 ntTSL 4 BASIC19.51■□□□□ 0.71
LRCH4O75427 CCDC50-202ENST00000392456 2454 ntAPPRIS P4 TSL 1 (best) BASIC19.51■□□□□ 0.71
LRCH4O75427 ANKRD17-211ENST00000639793 3486 ntTSL 5 BASIC19.51■□□□□ 0.71
LRCH4O75427 PEX5L-206ENST00000465751 2147 ntAPPRIS ALT2 TSL 2 BASIC19.51■□□□□ 0.71
LRCH4O75427 XYLT2-203ENST00000507602 2107 ntTSL 2 BASIC19.51■□□□□ 0.71
LRCH4O75427 KRT8P45-201ENST00000414328 1447 ntBASIC19.51■□□□□ 0.71
LRCH4O75427 VOPP1-201ENST00000285279 2962 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
LRCH4O75427 KCNQ2-205ENST00000360480 2775 ntAPPRIS ALT2 TSL 5 BASIC19.5■□□□□ 0.71
LRCH4O75427 SAMD11-210ENST00000616016 2391 ntTSL 5 BASIC19.5■□□□□ 0.71
LRCH4O75427 SAMD11-215ENST00000618779 2368 ntAPPRIS ALT2 TSL 5 BASIC19.5■□□□□ 0.71
LRCH4O75427 RELL2-202ENST00000444782 2154 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
LRCH4O75427 SIGIRR-202ENST00000397632 1598 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
LRCH4O75427 CENPA-202ENST00000335756 1452 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
LRCH4O75427 ZNF446-203ENST00000594369 2238 ntAPPRIS P2 TSL 1 (best) BASIC19.5■□□□□ 0.71
LRCH4O75427 TMIGD2-201ENST00000301272 1262 ntAPPRIS P3 TSL 1 (best) BASIC19.5■□□□□ 0.71
LRCH4O75427 AL162231.1-203ENST00000416454 465 ntAPPRIS ALT2 TSL 2 BASIC19.5■□□□□ 0.71
LRCH4O75427 AL390955.1-201ENST00000428694 934 ntBASIC19.5■□□□□ 0.71
LRCH4O75427 AL357874.1-201ENST00000428948 574 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
LRCH4O75427 KRBOX1-AS1-201ENST00000447834 2134 ntTSL 2 BASIC19.5■□□□□ 0.71
LRCH4O75427 FITM1-202ENST00000559294 800 ntBASIC19.5■□□□□ 0.71
LRCH4O75427 MIR4674-201ENST00000582457 87 ntBASIC19.5■□□□□ 0.71
LRCH4O75427 MIR4497-201ENST00000583208 89 ntBASIC19.5■□□□□ 0.71
LRCH4O75427 PDCD5-207ENST00000590247 699 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
LRCH4O75427 MCC-208ENST00000514701 2855 ntTSL 2 BASIC19.5■□□□□ 0.71
LRCH4O75427 CTSD-212ENST00000637815 2003 ntAPPRIS ALT2 TSL 5 BASIC19.5■□□□□ 0.71
LRCH4O75427 TFCP2-205ENST00000549867 1727 ntTSL 5 BASIC19.5■□□□□ 0.71
LRCH4O75427 TBC1D9-201ENST00000442267 5306 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
LRCH4O75427 RBM24-202ENST00000379052 2703 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
LRCH4O75427 HCK-202ENST00000375852 2082 ntAPPRIS ALT2 TSL 1 (best) BASIC19.5■□□□□ 0.71
LRCH4O75427 ZDHHC18-202ENST00000374142 5020 ntAPPRIS P2 TSL 1 (best) BASIC19.5■□□□□ 0.71
Retrieved 100 of 98,524 protein–RNA pairs in 23.6 ms