Protein–RNA interactions for Protein: O60504

SORBS3, Vinexin, humanhuman

Predictions only

Length 671 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SORBS3O60504 RPRM-201ENST00000325926 1471 ntAPPRIS P1 BASIC21.11■□□□□ 0.97
SORBS3O60504 RASSF7-205ENST00000454668 1450 ntAPPRIS ALT2 TSL 1 (best) BASIC21.11■□□□□ 0.97
SORBS3O60504 UHRF1-203ENST00000615884 2651 ntAPPRIS P1 TSL 2 BASIC21.11■□□□□ 0.97
SORBS3O60504 AC044802.1-201ENST00000501143 2894 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
SORBS3O60504 C1QTNF1-209ENST00000581774 1368 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
SORBS3O60504 COL13A1-201ENST00000354547 3027 ntAPPRIS ALT2 TSL 5 BASIC21.1■□□□□ 0.97
SORBS3O60504 CCDC47-202ENST00000403162 2195 ntAPPRIS P1 TSL 2 BASIC21.1■□□□□ 0.97
SORBS3O60504 BDKRB1-202ENST00000553356 1526 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
SORBS3O60504 FEM1AP3-201ENST00000403722 1741 ntBASIC21.1■□□□□ 0.97
SORBS3O60504 CDCA4-201ENST00000336219 2513 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
SORBS3O60504 DMRT2-204ENST00000382251 2292 ntAPPRIS P1 TSL 5 BASIC21.1■□□□□ 0.97
SORBS3O60504 KLHL14-201ENST00000358095 1884 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
SORBS3O60504 NECTIN3-211ENST00000493615 1876 ntAPPRIS ALT2 TSL 2 BASIC21.1■□□□□ 0.97
SORBS3O60504 FAM19A3-201ENST00000361886 1056 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
SORBS3O60504 AC106771.1-201ENST00000502209 372 ntTSL 2 BASIC21.1■□□□□ 0.97
SORBS3O60504 AP003396.3-201ENST00000530918 778 ntTSL 5 BASIC21.1■□□□□ 0.97
SORBS3O60504 IFI27L1-206ENST00000554562 571 ntTSL 3 BASIC21.1■□□□□ 0.97
SORBS3O60504 AC027682.5-201ENST00000567122 530 ntTSL 3 BASIC21.1■□□□□ 0.97
SORBS3O60504 LINC00092-202ENST00000580908 580 ntTSL 2 BASIC21.1■□□□□ 0.97
SORBS3O60504 FXYD7-203ENST00000586063 456 ntAPPRIS ALT2 TSL 3 BASIC21.1■□□□□ 0.97
SORBS3O60504 SMIM20-205ENST00000614775 1190 ntTSL 5 BASIC21.1■□□□□ 0.97
SORBS3O60504 APAF1-210ENST00000551964 5444 ntAPPRIS P4 TSL 1 (best) BASIC21.1■□□□□ 0.97
SORBS3O60504 PTGER3-202ENST00000351052 1404 ntAPPRIS ALT2 TSL 5 BASIC21.1■□□□□ 0.97
SORBS3O60504 YTHDF3-213ENST00000621820 2363 ntTSL 2 BASIC21.1■□□□□ 0.97
SORBS3O60504 MYEOV-202ENST00000441339 1996 ntAPPRIS P3 TSL 2 BASIC21.1■□□□□ 0.97
SORBS3O60504 TMEM104-202ENST00000417024 1781 ntTSL 2 BASIC21.1■□□□□ 0.97
SORBS3O60504 PFN2-203ENST00000452853 1780 ntAPPRIS ALT1 TSL 1 (best) BASIC21.1■□□□□ 0.97
SORBS3O60504 NDUFA10-203ENST00000404554 1557 ntTSL 5 BASIC21.1■□□□□ 0.97
SORBS3O60504 METTL5-207ENST00000410097 1370 ntTSL 2 BASIC21.1■□□□□ 0.97
SORBS3O60504 ACD-201ENST00000219251 2052 ntAPPRIS P3 TSL 2 BASIC21.09■□□□□ 0.97
SORBS3O60504 NHLRC1-201ENST00000340650 2248 ntAPPRIS P1 BASIC21.09■□□□□ 0.97
SORBS3O60504 GJB3-202ENST00000373366 2217 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
SORBS3O60504 PODXL2-201ENST00000342480 2186 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
SORBS3O60504 AC141586.3-201ENST00000562166 1838 ntBASIC21.09■□□□□ 0.97
SORBS3O60504 STARD4-203ENST00000502322 1467 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
SORBS3O60504 PXMP4-201ENST00000217398 979 ntTSL 2 BASIC21.09■□□□□ 0.97
SORBS3O60504 FUOM-201ENST00000278025 709 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
SORBS3O60504 RPA2-201ENST00000313433 1237 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
SORBS3O60504 HBZP1-201ENST00000354915 429 ntBASIC21.09■□□□□ 0.97
SORBS3O60504 PMEPA1-204ENST00000395814 800 ntTSL 3 BASIC21.09■□□□□ 0.97
SORBS3O60504 AC003075.1-204ENST00000433005 540 ntTSL 2 BASIC21.09■□□□□ 0.97
SORBS3O60504 SEC1P-202ENST00000473944 940 ntBASIC21.09■□□□□ 0.97
SORBS3O60504 LY6E-213ENST00000522528 606 ntTSL 3 BASIC21.09■□□□□ 0.97
SORBS3O60504 AL136038.3-201ENST00000561909 1096 ntBASIC21.09■□□□□ 0.97
SORBS3O60504 AC005625.1-201ENST00000590304 472 ntTSL 3 BASIC21.09■□□□□ 0.97
SORBS3O60504 AC016582.2-201ENST00000591908 446 ntTSL 3 BASIC21.09■□□□□ 0.97
SORBS3O60504 AC112497.1-201ENST00000624824 639 ntBASIC21.09■□□□□ 0.97
SORBS3O60504 DNAJB6-218ENST00000634080 1005 ntTSL 2 BASIC21.09■□□□□ 0.97
SORBS3O60504 CBLN2-201ENST00000269503 2945 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
SORBS3O60504 MZF1-203ENST00000594234 2385 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
SORBS3O60504 NCF1B-201ENST00000423083 1516 ntTSL 2 BASIC21.09■□□□□ 0.97
SORBS3O60504 ZHX3-212ENST00000558993 1528 ntTSL 5 BASIC21.09■□□□□ 0.97
SORBS3O60504 PUF60-202ENST00000349157 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC21.08■□□□□ 0.97
SORBS3O60504 ILDR2-203ENST00000469934 1950 ntAPPRIS ALT2 TSL 5 BASIC21.08■□□□□ 0.97
SORBS3O60504 CASTOR1-202ENST00000407689 1623 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
SORBS3O60504 TMEM121B-201ENST00000331437 4954 ntAPPRIS P3 BASIC21.08■□□□□ 0.97
SORBS3O60504 AC120498.9-201ENST00000339021 3867 ntBASIC21.08■□□□□ 0.97
SORBS3O60504 TMEM74-201ENST00000297459 1741 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
SORBS3O60504 CAPN12-201ENST00000328867 2762 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
SORBS3O60504 MAFG-202ENST00000392366 1743 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
SORBS3O60504 CBR1-203ENST00000439427 1024 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
SORBS3O60504 FCMR-202ENST00000442471 1441 ntTSL 2 BASIC21.08■□□□□ 0.97
SORBS3O60504 C7orf49-209ENST00000483029 596 ntTSL 2 BASIC21.08■□□□□ 0.97
SORBS3O60504 C5orf49-202ENST00000509627 1020 ntAPPRIS ALT2 TSL 1 (best) BASIC21.08■□□□□ 0.97
SORBS3O60504 PTGIR-204ENST00000596260 1009 ntTSL 2 BASIC21.08■□□□□ 0.97
SORBS3O60504 AC079602.3-201ENST00000623931 403 ntBASIC21.08■□□□□ 0.97
SORBS3O60504 NDUFAB1-201ENST00000007516 717 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
SORBS3O60504 IGFBP3-210ENST00000613132 2412 ntTSL 5 BASIC21.08■□□□□ 0.96
SORBS3O60504 PLPP4-202ENST00000398250 1521 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
SORBS3O60504 GPR83-202ENST00000539203 1909 ntTSL 5 BASIC21.08■□□□□ 0.96
SORBS3O60504 COLEC12-201ENST00000400256 5742 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
SORBS3O60504 ACBD4-204ENST00000431281 2026 ntTSL 5 BASIC21.07■□□□□ 0.96
SORBS3O60504 RASSF1-202ENST00000357043 1864 ntAPPRIS P3 TSL 1 (best) BASIC21.07■□□□□ 0.96
SORBS3O60504 PTPRK-218ENST00000525459 1722 ntTSL 2 BASIC21.07■□□□□ 0.96
SORBS3O60504 NYX-202ENST00000378220 2297 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
SORBS3O60504 AL049812.1-201ENST00000432563 2267 ntBASIC21.07■□□□□ 0.96
SORBS3O60504 MARK1-202ENST00000366918 5169 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
SORBS3O60504 TMEM190-201ENST00000291934 593 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
SORBS3O60504 ENSA-205ENST00000361532 792 ntTSL 2 BASIC21.07■□□□□ 0.96
SORBS3O60504 MED4-202ENST00000378586 931 ntAPPRIS ALT2 TSL 2 BASIC21.07■□□□□ 0.96
SORBS3O60504 TNFRSF10C-202ENST00000397703 1242 ntTSL 2 BASIC21.07■□□□□ 0.96
SORBS3O60504 HCG4P8-203ENST00000443049 980 ntBASIC21.07■□□□□ 0.96
SORBS3O60504 CHCHD3-203ENST00000448878 1038 ntTSL 5 BASIC21.07■□□□□ 0.96
SORBS3O60504 HELT-202ENST00000505610 846 ntAPPRIS ALT1 TSL 1 (best) BASIC21.07■□□□□ 0.96
SORBS3O60504 AC022424.1-201ENST00000512155 889 ntTSL 3 BASIC21.07■□□□□ 0.96
SORBS3O60504 LINC01785-201ENST00000598042 1112 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
SORBS3O60504 AC069148.1-201ENST00000608741 768 ntBASIC21.07■□□□□ 0.96
SORBS3O60504 CDK4-202ENST00000312990 1650 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
SORBS3O60504 PFKFB3-219ENST00000640683 2311 ntTSL 5 BASIC21.07■□□□□ 0.96
SORBS3O60504 CCT5-205ENST00000506600 1939 ntTSL 2 BASIC21.07■□□□□ 0.96
SORBS3O60504 AC087482.1-204ENST00000636067 2431 ntTSL 5 BASIC21.07■□□□□ 0.96
SORBS3O60504 AC099343.3-201ENST00000605834 2503 ntBASIC21.07■□□□□ 0.96
SORBS3O60504 TOX2-205ENST00000423191 1709 ntTSL 2 BASIC21.07■□□□□ 0.96
SORBS3O60504 MMAB-204ENST00000537236 1342 ntTSL 3 BASIC21.06■□□□□ 0.96
SORBS3O60504 TGFBR1-201ENST00000374990 5720 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
SORBS3O60504 PAN3-201ENST00000380958 2833 ntAPPRIS P2 TSL 5 BASIC21.06■□□□□ 0.96
SORBS3O60504 ADAMTS19-205ENST00000638972 5089 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
SORBS3O60504 PNKP-224ENST00000631020 1545 ntTSL 5 BASIC21.06■□□□□ 0.96
SORBS3O60504 KLHL11-201ENST00000319121 2383 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
SORBS3O60504 RGS11-204ENST00000397770 2390 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Retrieved 100 of 98,524 protein–RNA pairs in 28.3 ms