Protein–RNA interactions for Protein: O43900

PRICKLE3, Prickle planar cell polarity protein 3, humanhuman

Predicted RBP Predictions only

Length 615 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRICKLE3O43900 ST20-202ENST00000485386 529 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
PRICKLE3O43900 AC011773.3-202ENST00000549291 790 ntTSL 3 BASIC18■□□□□ 0.47
PRICKLE3O43900 CMTM3-210ENST00000565666 769 ntTSL 3 BASIC18■□□□□ 0.47
PRICKLE3O43900 OCIAD2-210ENST00000620187 697 ntTSL 3 BASIC18■□□□□ 0.47
PRICKLE3O43900 DHRSX-201ENST00000334651 2571 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
PRICKLE3O43900 AC098818.2-201ENST00000564925 2320 ntBASIC18■□□□□ 0.47
PRICKLE3O43900 TULP1-208ENST00000614066 2084 ntAPPRIS ALT2 TSL 5 BASIC18■□□□□ 0.47
PRICKLE3O43900 TBC1D10C-201ENST00000312390 1497 ntTSL 5 BASIC18■□□□□ 0.47
PRICKLE3O43900 EEF1AKMT2-201ENST00000368836 1462 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
PRICKLE3O43900 TSGA10IP-203ENST00000532620 1925 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
PRICKLE3O43900 CIRBP-201ENST00000320936 1328 ntAPPRIS P3 TSL 1 (best) BASIC17.99■□□□□ 0.47
PRICKLE3O43900 CIRBP-207ENST00000586472 1303 ntAPPRIS P3 TSL 3 BASIC17.99■□□□□ 0.47
PRICKLE3O43900 Z98044.1-201ENST00000632503 1764 ntBASIC17.99■□□□□ 0.47
PRICKLE3O43900 HOXB1-202ENST00000577092 1414 ntBASIC17.99■□□□□ 0.47
PRICKLE3O43900 TWIST2-202ENST00000612363 1404 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
PRICKLE3O43900 CBSL-210ENST00000624934 1992 ntTSL 5 BASIC17.99■□□□□ 0.47
PRICKLE3O43900 DOC2A-209ENST00000564979 1630 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
PRICKLE3O43900 MAP4K4-204ENST00000350198 7316 ntTSL 5 BASIC17.99■□□□□ 0.47
PRICKLE3O43900 CDK13-207ENST00000613626 3099 ntTSL 5 BASIC17.99■□□□□ 0.47
PRICKLE3O43900 CLN3-204ENST00000357857 1720 ntTSL 2 BASIC17.99■□□□□ 0.47
PRICKLE3O43900 SNX8-201ENST00000222990 4727 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
PRICKLE3O43900 UPK3B-201ENST00000257632 1296 ntAPPRIS P5 TSL 2 BASIC17.99■□□□□ 0.47
PRICKLE3O43900 AC117947.1-201ENST00000427448 529 ntBASIC17.99■□□□□ 0.47
PRICKLE3O43900 ELP6-205ENST00000439305 880 ntTSL 2 BASIC17.99■□□□□ 0.47
PRICKLE3O43900 CDKN2AIPNL-202ENST00000458198 1223 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
PRICKLE3O43900 EHMT1-211ENST00000482340 691 ntTSL 5 BASIC17.99■□□□□ 0.47
PRICKLE3O43900 COX11P1-201ENST00000489116 835 ntBASIC17.99■□□□□ 0.47
PRICKLE3O43900 KRT18P41-201ENST00000518924 1277 ntBASIC17.99■□□□□ 0.47
PRICKLE3O43900 PCID2-203ENST00000375457 2372 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
PRICKLE3O43900 NR1H2-202ENST00000411902 1466 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
PRICKLE3O43900 ABO-203ENST00000611156 1577 ntAPPRIS ALT2 TSL 5 BASIC17.99■□□□□ 0.47
PRICKLE3O43900 PRSS33-201ENST00000293851 1694 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
PRICKLE3O43900 EPHX4-201ENST00000370383 1437 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
PRICKLE3O43900 FBXW9-203ENST00000587955 1437 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
PRICKLE3O43900 INTS11-249ENST00000618806 1523 ntTSL 2 BASIC17.98■□□□□ 0.47
PRICKLE3O43900 PNKP-224ENST00000631020 1545 ntTSL 5 BASIC17.98■□□□□ 0.47
PRICKLE3O43900 NAF1-202ENST00000422287 1604 ntAPPRIS ALT2 TSL 1 (best) BASIC17.98■□□□□ 0.47
PRICKLE3O43900 CASKIN2-205ENST00000581870 1612 ntTSL 2 BASIC17.98■□□□□ 0.47
PRICKLE3O43900 SMAD7-201ENST00000262158 3087 ntAPPRIS P3 TSL 1 (best) BASIC17.98■□□□□ 0.47
PRICKLE3O43900 MB21D1-202ENST00000370318 1917 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
PRICKLE3O43900 COBL-210ENST00000632460 1941 ntTSL 5 BASIC17.98■□□□□ 0.47
PRICKLE3O43900 CMTM7-201ENST00000334983 2038 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
PRICKLE3O43900 PTBP1-220ENST00000627714 2201 ntTSL 5 BASIC17.98■□□□□ 0.47
PRICKLE3O43900 LRRC4B-202ENST00000599957 3019 ntAPPRIS P1 TSL 3 BASIC17.98■□□□□ 0.47
PRICKLE3O43900 SRRM3-204ENST00000611745 3612 ntAPPRIS P1 TSL 5 BASIC17.98■□□□□ 0.47
PRICKLE3O43900 TMEM160-201ENST00000253047 663 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
PRICKLE3O43900 CR769775.1-204ENST00000439760 747 ntTSL 5 BASIC17.98■□□□□ 0.47
PRICKLE3O43900 TMEM64-204ENST00000519519 873 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
PRICKLE3O43900 MCRIP1-206ENST00000573478 1123 ntTSL 2 BASIC17.98■□□□□ 0.47
PRICKLE3O43900 TPSB2-201ENST00000606293 1165 ntAPPRIS ALT2 TSL 1 (best) BASIC17.98■□□□□ 0.47
PRICKLE3O43900 AC139887.4-201ENST00000607877 719 ntBASIC17.98■□□□□ 0.47
PRICKLE3O43900 OBP2B-205ENST00000618116 961 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
PRICKLE3O43900 AC011558.1-201ENST00000623459 338 ntBASIC17.98■□□□□ 0.47
PRICKLE3O43900 ARHGAP8-202ENST00000356099 1584 ntAPPRIS P3 TSL 1 (best) BASIC17.98■□□□□ 0.47
PRICKLE3O43900 TNFSF9-201ENST00000245817 1665 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
PRICKLE3O43900 AL031598.1-201ENST00000561511 1773 ntBASIC17.98■□□□□ 0.47
PRICKLE3O43900 ACADS-201ENST00000242592 1950 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
PRICKLE3O43900 ITGBL1-202ENST00000376180 2494 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
PRICKLE3O43900 HOXC13-201ENST00000243056 2423 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
PRICKLE3O43900 PGAM1-201ENST00000334828 1830 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
PRICKLE3O43900 WDSUB1-203ENST00000392796 1812 ntAPPRIS P1 TSL 2 BASIC17.98■□□□□ 0.47
PRICKLE3O43900 JPT1-203ENST00000409753 1605 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
PRICKLE3O43900 GAS7-210ENST00000579158 1528 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
PRICKLE3O43900 HIC1-201ENST00000322941 3053 ntAPPRIS P1 TSL 5 BASIC17.97■□□□□ 0.47
PRICKLE3O43900 SYBU-232ENST00000533171 2498 ntAPPRIS ALT2 TSL 2 BASIC17.97■□□□□ 0.47
PRICKLE3O43900 STRN4-202ENST00000391910 3628 ntAPPRIS ALT1 TSL 5 BASIC17.97■□□□□ 0.47
PRICKLE3O43900 TMEM8B-204ENST00000439587 2150 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
PRICKLE3O43900 IKBKG-214ENST00000618670 2069 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
PRICKLE3O43900 OSM-201ENST00000215781 1854 ntAPPRIS P3 TSL 1 (best) BASIC17.97■□□□□ 0.47
PRICKLE3O43900 ISYNA1-206ENST00000578963 1691 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
PRICKLE3O43900 FAM214B-203ENST00000378561 5771 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
PRICKLE3O43900 CACNA1A-246ENST00000637736 8340 ntAPPRIS ALT2 TSL 5 BASIC17.97■□□□□ 0.47
PRICKLE3O43900 LIPG-203ENST00000577628 2323 ntTSL 2 BASIC17.97■□□□□ 0.47
PRICKLE3O43900 GLRX2-201ENST00000367439 701 ntAPPRIS ALT2 TSL 1 (best) BASIC17.97■□□□□ 0.47
PRICKLE3O43900 AC103564.1-201ENST00000437330 562 ntTSL 5 BASIC17.97■□□□□ 0.47
PRICKLE3O43900 AL162457.2-201ENST00000447909 937 ntTSL 3 BASIC17.97■□□□□ 0.47
PRICKLE3O43900 YBX1P2-201ENST00000489612 999 ntBASIC17.97■□□□□ 0.47
PRICKLE3O43900 SELENOS-203ENST00000526049 1188 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
PRICKLE3O43900 AL132780.2-201ENST00000557615 1021 ntTSL 3 BASIC17.97■□□□□ 0.47
PRICKLE3O43900 CENPX-206ENST00000580435 710 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
PRICKLE3O43900 PTGIR-204ENST00000596260 1009 ntTSL 2 BASIC17.97■□□□□ 0.47
PRICKLE3O43900 DNAJB6-218ENST00000634080 1005 ntTSL 2 BASIC17.97■□□□□ 0.47
PRICKLE3O43900 FBXO31-201ENST00000311635 5934 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
PRICKLE3O43900 CSNK2A2-201ENST00000262506 1701 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
PRICKLE3O43900 MAFG-202ENST00000392366 1743 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
PRICKLE3O43900 MARK2-202ENST00000361128 3004 ntAPPRIS ALT2 TSL 1 (best) BASIC17.97■□□□□ 0.47
PRICKLE3O43900 ICA1-208ENST00000407906 1615 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
PRICKLE3O43900 AC034236.2-201ENST00000606662 1610 ntBASIC17.97■□□□□ 0.47
PRICKLE3O43900 KRT8P7-201ENST00000533003 1432 ntBASIC17.97■□□□□ 0.47
PRICKLE3O43900 ARHGEF18-202ENST00000359920 5733 ntAPPRIS ALT2 TSL 2 BASIC17.97■□□□□ 0.47
PRICKLE3O43900 NUDT16L1-201ENST00000304301 1349 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
PRICKLE3O43900 FKBP3-202ENST00000396062 1346 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
PRICKLE3O43900 DRD5-201ENST00000304374 2330 ntAPPRIS P1 BASIC17.97■□□□□ 0.47
PRICKLE3O43900 TRIM58-201ENST00000366481 3225 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
PRICKLE3O43900 FCER2-201ENST00000346664 1596 ntAPPRIS P2 TSL 1 (best) BASIC17.96■□□□□ 0.47
PRICKLE3O43900 FCER2-205ENST00000597921 1560 ntAPPRIS P2 TSL 1 (best) BASIC17.96■□□□□ 0.47
PRICKLE3O43900 FMN2-201ENST00000319653 6434 ntAPPRIS P1 TSL 5 BASIC17.96■□□□□ 0.47
PRICKLE3O43900 ARMC6-202ENST00000392335 2383 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
PRICKLE3O43900 SCARB1-201ENST00000261693 2611 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
PRICKLE3O43900 EDEM1-204ENST00000445686 1363 ntTSL 2 BASIC17.96■□□□□ 0.47
Retrieved 100 of 98,524 protein–RNA pairs in 32.1 ms