Protein–RNA interactions for Protein: O43868

SLC28A2, Sodium/nucleoside cotransporter 2, humanhuman

Predictions only

Length 658 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC28A2O43868 LTBP3-202ENST00000322147 4046 ntAPPRIS P3 TSL 1 (best) BASIC18.07■□□□□ 0.48
SLC28A2O43868 EARS2-210ENST00000564501 2027 ntTSL 5 BASIC18.06■□□□□ 0.48
SLC28A2O43868 SCARF2-202ENST00000622235 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC18.06■□□□□ 0.48
SLC28A2O43868 LRRC23-207ENST00000433346 1387 ntTSL 5 BASIC18.06■□□□□ 0.48
SLC28A2O43868 RAB7A-201ENST00000265062 2244 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
SLC28A2O43868 ETV4-204ENST00000545089 1628 ntTSL 2 BASIC18.06■□□□□ 0.48
SLC28A2O43868 ORAI2-204ENST00000473939 2493 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
SLC28A2O43868 PAOX-201ENST00000278060 1858 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
SLC28A2O43868 INGX-201ENST00000359239 846 ntBASIC18.06■□□□□ 0.48
SLC28A2O43868 AC246785.2-201ENST00000432512 513 ntBASIC18.06■□□□□ 0.48
SLC28A2O43868 YBX1P10-201ENST00000444752 975 ntBASIC18.06■□□□□ 0.48
SLC28A2O43868 COX11P1-201ENST00000489116 835 ntBASIC18.06■□□□□ 0.48
SLC28A2O43868 AC097488.1-201ENST00000507834 756 ntBASIC18.06■□□□□ 0.48
SLC28A2O43868 CCNG1-211ENST00000512163 919 ntTSL 2 BASIC18.06■□□□□ 0.48
SLC28A2O43868 IFI27L2-206ENST00000556727 556 ntTSL 3 BASIC18.06■□□□□ 0.48
SLC28A2O43868 ZNF599-203ENST00000588760 948 ntTSL 2 BASIC18.06■□□□□ 0.48
SLC28A2O43868 AC012313.10-201ENST00000623509 926 ntBASIC18.06■□□□□ 0.48
SLC28A2O43868 P2RY2-201ENST00000311131 2660 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
SLC28A2O43868 CACNA1A-227ENST00000636549 6792 ntAPPRIS ALT2 TSL 5 BASIC18.06■□□□□ 0.48
SLC28A2O43868 YBX3-201ENST00000228251 1796 ntAPPRIS P3 TSL 1 (best) BASIC18.06■□□□□ 0.48
SLC28A2O43868 NOMO1-201ENST00000287667 4355 ntAPPRIS P2 TSL 1 (best) BASIC18.06■□□□□ 0.48
SLC28A2O43868 ZKSCAN7-205ENST00000426540 2791 ntAPPRIS P1 TSL 2 BASIC18.06■□□□□ 0.48
SLC28A2O43868 TEX21P-204ENST00000641479 1693 ntBASIC18.06■□□□□ 0.48
SLC28A2O43868 ALDH7A1-215ENST00000553117 1935 ntTSL 2 BASIC18.06■□□□□ 0.48
SLC28A2O43868 COL18A1-202ENST00000355480 5924 ntAPPRIS P3 TSL 1 (best) BASIC18.05■□□□□ 0.48
SLC28A2O43868 FAM206A-201ENST00000322940 2134 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
SLC28A2O43868 FDFT1-226ENST00000623368 2368 ntTSL 2 BASIC18.05■□□□□ 0.48
SLC28A2O43868 MTFR1L-202ENST00000374301 2099 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
SLC28A2O43868 TRPM2-202ENST00000300482 5989 ntAPPRIS P3 TSL 1 (best) BASIC18.05■□□□□ 0.48
SLC28A2O43868 ACBD4-207ENST00000586346 1579 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
SLC28A2O43868 SHF-201ENST00000290894 2500 ntAPPRIS P3 TSL 2 BASIC18.05■□□□□ 0.48
SLC28A2O43868 AC069544.2-201ENST00000640019 2528 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
SLC28A2O43868 MPP5-201ENST00000261681 5552 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
SLC28A2O43868 SENP6-201ENST00000327284 2700 ntTSL 2 BASIC18.05■□□□□ 0.48
SLC28A2O43868 GPR20-201ENST00000377741 1515 ntAPPRIS P1 TSL 3 BASIC18.05■□□□□ 0.48
SLC28A2O43868 NTMT1-210ENST00000613644 1501 ntAPPRIS P1 TSL 3 BASIC18.05■□□□□ 0.48
SLC28A2O43868 USP48-204ENST00000400301 4309 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
SLC28A2O43868 MPG-201ENST00000219431 1193 ntAPPRIS P4 TSL 3 BASIC18.05■□□□□ 0.48
SLC28A2O43868 CATIP-AS1-202ENST00000441749 480 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
SLC28A2O43868 AL139246.2-201ENST00000456687 1297 ntTSL 5 BASIC18.05■□□□□ 0.48
SLC28A2O43868 PSMD9-208ENST00000542602 516 ntTSL 3 BASIC18.05■□□□□ 0.48
SLC28A2O43868 DGCR10-201ENST00000609839 495 ntBASIC18.05■□□□□ 0.48
SLC28A2O43868 AC006538.3-201ENST00000612495 578 ntBASIC18.05■□□□□ 0.48
SLC28A2O43868 ZNF534-205ENST00000617900 1085 ntTSL 2 BASIC18.05■□□□□ 0.48
SLC28A2O43868 ST3GAL4-203ENST00000392669 1724 ntAPPRIS ALT1 TSL 1 (best) BASIC18.05■□□□□ 0.48
SLC28A2O43868 C19orf25-206ENST00000588849 1472 ntTSL 5 BASIC18.05■□□□□ 0.48
SLC28A2O43868 TLE4-205ENST00000376544 4871 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
SLC28A2O43868 ARHGAP26-201ENST00000274498 6862 ntAPPRIS P3 TSL 1 (best) BASIC18.05■□□□□ 0.48
SLC28A2O43868 RTN4-201ENST00000317610 2333 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
SLC28A2O43868 SMPD3-203ENST00000563226 2093 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
SLC28A2O43868 PRDM5-201ENST00000264808 5330 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
SLC28A2O43868 CORO1A-216ENST00000570045 1622 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
SLC28A2O43868 TAL1-202ENST00000371884 4642 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
SLC28A2O43868 TMEM70-201ENST00000312184 2018 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
SLC28A2O43868 DNAJC11-201ENST00000294401 2210 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
SLC28A2O43868 YDJC-201ENST00000292778 1351 ntAPPRIS P1 TSL 2 BASIC18.04■□□□□ 0.48
SLC28A2O43868 TEAD2-202ENST00000377214 2440 ntAPPRIS ALT1 TSL 2 BASIC18.04■□□□□ 0.48
SLC28A2O43868 SNX19-209ENST00000530356 1562 ntTSL 2 BASIC18.04■□□□□ 0.48
SLC28A2O43868 OGFOD2-201ENST00000228922 1780 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
SLC28A2O43868 ZNF843-203ENST00000618063 1765 ntAPPRIS P2 TSL 1 (best) BASIC18.04■□□□□ 0.48
SLC28A2O43868 TRIM7-205ENST00000422067 1954 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
SLC28A2O43868 SNAP47-202ENST00000366759 2362 ntAPPRIS P3 TSL 1 (best) BASIC18.04■□□□□ 0.48
SLC28A2O43868 HCK-206ENST00000518730 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC18.04■□□□□ 0.48
SLC28A2O43868 COL5A3-201ENST00000264828 6174 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
SLC28A2O43868 SDCBP-204ENST00000447182 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC18.04■□□□□ 0.48
SLC28A2O43868 ERCC2-203ENST00000391944 2334 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
SLC28A2O43868 CPXM2-204ENST00000615851 2512 ntTSL 5 BASIC18.04■□□□□ 0.48
SLC28A2O43868 MORC4-201ENST00000255495 2940 ntAPPRIS ALT2 TSL 1 (best) BASIC18.04■□□□□ 0.48
SLC28A2O43868 DLK1-202ENST00000341267 4722 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
SLC28A2O43868 CHST11-201ENST00000303694 5709 ntAPPRIS P3 TSL 1 (best) BASIC18.04■□□□□ 0.48
SLC28A2O43868 COL16A1-203ENST00000373672 5736 ntAPPRIS P1 TSL 5 BASIC18.04■□□□□ 0.48
SLC28A2O43868 FMR1-207ENST00000439526 3699 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
SLC28A2O43868 LIN54-209ENST00000510557 2257 ntTSL 2 BASIC18.04■□□□□ 0.48
SLC28A2O43868 SPRYD7-204ENST00000613924 2285 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
SLC28A2O43868 TSPAN15-201ENST00000373290 1698 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
SLC28A2O43868 VMO1-201ENST00000328739 766 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
SLC28A2O43868 YWHAZ-204ENST00000395953 994 ntAPPRIS P1 TSL 5 BASIC18.04■□□□□ 0.48
SLC28A2O43868 LINC01786-202ENST00000453732 389 ntTSL 2 BASIC18.04■□□□□ 0.48
SLC28A2O43868 AC079385.1-201ENST00000551505 570 ntTSL 4 BASIC18.04■□□□□ 0.48
SLC28A2O43868 C17orf49-208ENST00000552402 760 ntTSL 2 BASIC18.04■□□□□ 0.48
SLC28A2O43868 FFAR4-203ENST00000604414 1142 ntTSL 3 BASIC18.04■□□□□ 0.48
SLC28A2O43868 PHF2-202ENST00000375376 3045 ntTSL 5 BASIC18.04■□□□□ 0.48
SLC28A2O43868 AC090340.1-201ENST00000620778 4980 ntBASIC18.04■□□□□ 0.48
SLC28A2O43868 POLR1D-203ENST00000399697 2036 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
SLC28A2O43868 LINC01356-201ENST00000401018 1819 ntTSL 2 BASIC18.04■□□□□ 0.48
SLC28A2O43868 AC141586.3-201ENST00000562166 1838 ntBASIC18.04■□□□□ 0.48
SLC28A2O43868 KRT8P8-201ENST00000434750 1448 ntBASIC18.04■□□□□ 0.48
SLC28A2O43868 LMNB1-202ENST00000395354 1572 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
SLC28A2O43868 C21orf91-203ENST00000400559 1593 ntAPPRIS ALT1 TSL 5 BASIC18.04■□□□□ 0.48
SLC28A2O43868 GTF3A-201ENST00000381140 1383 ntAPPRIS ALT2 TSL 1 (best) BASIC18.04■□□□□ 0.48
SLC28A2O43868 PTH2R-204ENST00000617735 2472 ntTSL 2 BASIC18.04■□□□□ 0.48
SLC28A2O43868 FBXL16-203ENST00000562563 2257 ntTSL 2 BASIC18.03■□□□□ 0.48
SLC28A2O43868 CXorf49-202ENST00000535490 1715 ntAPPRIS P1 TSL 5 BASIC18.03■□□□□ 0.48
SLC28A2O43868 CXorf49B-202ENST00000542739 1715 ntAPPRIS P1 TSL 5 BASIC18.03■□□□□ 0.48
SLC28A2O43868 ART5-203ENST00000397068 1504 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
SLC28A2O43868 ANGPTL4-201ENST00000301455 1879 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
SLC28A2O43868 RPS6KA1-203ENST00000374166 3131 ntTSL 5 BASIC18.03■□□□□ 0.48
SLC28A2O43868 NAT16-201ENST00000300303 2935 ntAPPRIS P2 TSL 2 BASIC18.03■□□□□ 0.48
SLC28A2O43868 AC093503.3-201ENST00000624917 2352 ntBASIC18.03■□□□□ 0.48
SLC28A2O43868 TLNRD1-201ENST00000267984 4845 ntAPPRIS P1 BASIC18.03■□□□□ 0.48
Retrieved 100 of 98,524 protein–RNA pairs in 42.2 ms