Protein–RNA interactions for Protein: O43679

LDB2, LIM domain-binding protein 2, humanhuman

Predictions only

Length 373 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LDB2O43679 PCOLCE-AS1-201ENST00000442166 2537 ntTSL 2 BASIC18.75■□□□□ 0.59
LDB2O43679 CTSA-201ENST00000191018 1898 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
LDB2O43679 CYR61-201ENST00000451137 2290 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
LDB2O43679 STX6-204ENST00000542060 4809 ntTSL 2 BASIC18.75■□□□□ 0.59
LDB2O43679 IFRD2-202ENST00000417626 2109 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
LDB2O43679 OGG1-203ENST00000302036 2220 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
LDB2O43679 KLC1-217ENST00000554280 2426 ntTSL 5 BASIC18.74■□□□□ 0.59
LDB2O43679 RNF139-201ENST00000303545 2637 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
LDB2O43679 PRDM8-202ENST00000415738 3124 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
LDB2O43679 OBSL1-204ENST00000404537 5841 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
LDB2O43679 TAPT1-201ENST00000405303 4591 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
LDB2O43679 MYEOV-201ENST00000308946 2287 ntAPPRIS P3 TSL 1 (best) BASIC18.74■□□□□ 0.59
LDB2O43679 TCAIM-203ENST00000396078 2178 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
LDB2O43679 NPEPL1-203ENST00000525817 1780 ntTSL 2 BASIC18.74■□□□□ 0.59
LDB2O43679 SLC35A3-224ENST00000640732 1777 ntTSL 5 BASIC18.74■□□□□ 0.59
LDB2O43679 GTF2H4-202ENST00000376316 1673 ntAPPRIS P1 TSL 5 BASIC18.74■□□□□ 0.59
LDB2O43679 ATP5L-201ENST00000300688 1577 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
LDB2O43679 PHKG2-202ENST00000424889 1566 ntTSL 2 BASIC18.74■□□□□ 0.59
LDB2O43679 AL445685.1-201ENST00000425802 762 ntTSL 3 BASIC18.74■□□□□ 0.59
LDB2O43679 MCCD1P1-208ENST00000445732 328 ntBASIC18.74■□□□□ 0.59
LDB2O43679 TSPY17P-201ENST00000450329 467 ntBASIC18.74■□□□□ 0.59
LDB2O43679 AL365259.1-203ENST00000451660 707 ntTSL 3 BASIC18.74■□□□□ 0.59
LDB2O43679 AP003041.3-201ENST00000527151 707 ntBASIC18.74■□□□□ 0.59
LDB2O43679 SLC39A2-203ENST00000554422 1259 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
LDB2O43679 ARHGDIA-207ENST00000580685 1201 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
LDB2O43679 AC020913.2-201ENST00000601929 629 ntTSL 5 BASIC18.74■□□□□ 0.59
LDB2O43679 TFAP4-201ENST00000204517 2215 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
LDB2O43679 HOXC10-201ENST00000303460 1936 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
LDB2O43679 EPB41L2-211ENST00000525271 2568 ntTSL 2 BASIC18.74■□□□□ 0.59
LDB2O43679 ABCG4-206ENST00000622721 2553 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
LDB2O43679 EML6-201ENST00000356458 8320 ntAPPRIS P1 TSL 5 BASIC18.74■□□□□ 0.59
LDB2O43679 ISL2-201ENST00000290759 1881 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
LDB2O43679 ASIC3-202ENST00000349064 1895 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
LDB2O43679 CABP7-201ENST00000216144 3259 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
LDB2O43679 TRIM63-201ENST00000374272 1770 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
LDB2O43679 PRR5-201ENST00000006251 1767 ntTSL 2 BASIC18.73■□□□□ 0.59
LDB2O43679 AC138028.1-201ENST00000333666 2137 ntTSL 2 BASIC18.73■□□□□ 0.59
LDB2O43679 AC126763.1-201ENST00000552015 2118 ntBASIC18.73■□□□□ 0.59
LDB2O43679 NUDT17-201ENST00000334513 1473 ntAPPRIS P1 TSL 5 BASIC18.73■□□□□ 0.59
LDB2O43679 EEF1AKMT2-201ENST00000368836 1462 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
LDB2O43679 CTNNBL1-201ENST00000361383 1925 ntAPPRIS P2 TSL 1 (best) BASIC18.73■□□□□ 0.59
LDB2O43679 EXOSC3-201ENST00000327304 1806 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
LDB2O43679 CLN3-206ENST00000360019 1840 ntTSL 2 BASIC18.73■□□□□ 0.59
LDB2O43679 TMEM214-203ENST00000404032 2830 ntTSL 2 BASIC18.73■□□□□ 0.59
LDB2O43679 TSPY14P-201ENST00000303979 915 ntBASIC18.73■□□□□ 0.59
LDB2O43679 TNNT3-206ENST00000381579 1042 ntAPPRIS ALT2 TSL 1 (best) BASIC18.73■□□□□ 0.59
LDB2O43679 RNF144A-AS1-204ENST00000437589 618 ntTSL 2 BASIC18.73■□□□□ 0.59
LDB2O43679 TAPBP-236ENST00000456592 817 ntTSL 5 BASIC18.73■□□□□ 0.59
LDB2O43679 RPL29-202ENST00000466397 742 ntAPPRIS P1 TSL 2 BASIC18.73■□□□□ 0.59
LDB2O43679 C2orf69P3-201ENST00000565542 1120 ntBASIC18.73■□□□□ 0.59
LDB2O43679 SEMA3B-210ENST00000611067 2292 ntAPPRIS ALT2 TSL 1 (best) BASIC18.73■□□□□ 0.59
LDB2O43679 AK3-202ENST00000381809 2736 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
LDB2O43679 LLGL2-203ENST00000392550 3509 ntAPPRIS P2 TSL 1 (best) BASIC18.73■□□□□ 0.59
LDB2O43679 LARGE2-202ENST00000401752 2516 ntAPPRIS P3 TSL 1 (best) BASIC18.73■□□□□ 0.59
LDB2O43679 LRRC20-205ENST00000395010 2959 ntTSL 3 BASIC18.73■□□□□ 0.59
LDB2O43679 KCNQ5-202ENST00000355194 6566 ntAPPRIS ALT1 TSL 5 BASIC18.73■□□□□ 0.59
LDB2O43679 KCNQ5-206ENST00000402622 6596 ntAPPRIS ALT2 TSL 5 BASIC18.73■□□□□ 0.59
LDB2O43679 SAAL1-201ENST00000300013 1518 ntAPPRIS ALT1 TSL 2 BASIC18.73■□□□□ 0.59
LDB2O43679 DPP10-203ENST00000393147 2758 ntAPPRIS ALT2 TSL 1 (best) BASIC18.73■□□□□ 0.59
LDB2O43679 VAV1-204ENST00000596764 2775 ntTSL 2 BASIC18.73■□□□□ 0.59
LDB2O43679 ZGPAT-202ENST00000355969 1871 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
LDB2O43679 KCNA3-201ENST00000369769 2569 ntAPPRIS P1 BASIC18.73■□□□□ 0.59
LDB2O43679 RNF165-205ENST00000588679 2904 ntBASIC18.73■□□□□ 0.59
LDB2O43679 SHISA5-220ENST00000619810 2385 ntTSL 2 BASIC18.73■□□□□ 0.59
LDB2O43679 ZBTB8A-201ENST00000316459 1943 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
LDB2O43679 SIL1-202ENST00000394817 1923 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
LDB2O43679 ADAMTS19-205ENST00000638972 5089 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
LDB2O43679 KLHL40-201ENST00000287777 2517 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
LDB2O43679 ZNF692-204ENST00000451251 2065 ntAPPRIS ALT2 TSL 2 BASIC18.72■□□□□ 0.59
LDB2O43679 TFCP2-205ENST00000549867 1727 ntTSL 5 BASIC18.72■□□□□ 0.59
LDB2O43679 CPSF3-201ENST00000238112 2345 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
LDB2O43679 PDXK-219ENST00000621478 1967 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
LDB2O43679 WWOX-214ENST00000566780 2482 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
LDB2O43679 NPR3-204ENST00000434067 2715 ntTSL 5 BASIC18.72■□□□□ 0.59
LDB2O43679 RIMBP3B-201ENST00000620804 6105 ntAPPRIS P1 BASIC18.72■□□□□ 0.59
LDB2O43679 MMP23A-201ENST00000234610 1017 ntBASIC18.72■□□□□ 0.59
LDB2O43679 NARFL-201ENST00000251588 2112 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
LDB2O43679 KRT17P2-202ENST00000326333 1174 ntTSL 2 BASIC18.72■□□□□ 0.59
LDB2O43679 MIR564-202ENST00000385049 94 ntBASIC18.72■□□□□ 0.59
LDB2O43679 AC012618.3-203ENST00000426044 917 ntTSL 2 BASIC18.72■□□□□ 0.59
LDB2O43679 AC007663.1-201ENST00000438948 1240 ntBASIC18.72■□□□□ 0.59
LDB2O43679 SMIM1-201ENST00000444870 546 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
LDB2O43679 CCR12P-201ENST00000446203 998 ntBASIC18.72■□□□□ 0.59
LDB2O43679 GXYLT1P3-201ENST00000453058 1193 ntBASIC18.72■□□□□ 0.59
LDB2O43679 FAU-207ENST00000529639 847 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
LDB2O43679 AC010947.1-201ENST00000623454 693 ntBASIC18.72■□□□□ 0.59
LDB2O43679 INTS11-249ENST00000618806 1523 ntTSL 2 BASIC18.72■□□□□ 0.59
LDB2O43679 EMX2-203ENST00000553456 2897 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
LDB2O43679 SNX17-201ENST00000233575 2044 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
LDB2O43679 NEUROD2-201ENST00000302584 2041 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
LDB2O43679 ATRIP-202ENST00000346691 2509 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
LDB2O43679 KRT8P45-201ENST00000414328 1447 ntBASIC18.72■□□□□ 0.59
LDB2O43679 IRF5-202ENST00000357234 1680 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
LDB2O43679 SLC2A14-214ENST00000542505 1650 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
LDB2O43679 KLHL29-203ENST00000486442 5287 ntAPPRIS P1 TSL 5 BASIC18.72■□□□□ 0.59
LDB2O43679 PNPLA2-201ENST00000336615 2428 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
LDB2O43679 RAX2-201ENST00000555633 2414 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
LDB2O43679 CCNJ-202ENST00000403870 2830 ntTSL 5 BASIC18.72■□□□□ 0.59
LDB2O43679 HOXA9-201ENST00000343483 2060 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
LDB2O43679 KCNS2-201ENST00000287042 5219 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Retrieved 100 of 98,524 protein–RNA pairs in 31.6 ms