Protein–RNA interactions for Protein: O43633

CHMP2A, Charged multivesicular body protein 2a, humanhuman

Predictions only

Length 222 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP2AO43633 KCTD12-201ENST00000377474 6225 ntAPPRIS P1 BASIC21.1■□□□□ 0.97
CHMP2AO43633 ADORA2A-201ENST00000337539 2569 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
CHMP2AO43633 FBXW9-203ENST00000587955 1437 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
CHMP2AO43633 OGFOD2-207ENST00000536150 1956 ntTSL 2 BASIC21.1■□□□□ 0.97
CHMP2AO43633 MFSD10-202ENST00000355443 1753 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
CHMP2AO43633 PDE9A-213ENST00000398236 1776 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
CHMP2AO43633 GUCA1A-205ENST00000541991 1921 ntTSL 5 BASIC21.1■□□□□ 0.97
CHMP2AO43633 KRT81-202ENST00000615839 1505 ntAPPRIS ALT2 TSL 5 BASIC21.09■□□□□ 0.97
CHMP2AO43633 AURKA-202ENST00000347343 2248 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
CHMP2AO43633 FAM57A-201ENST00000301324 2013 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
CHMP2AO43633 CELF2-217ENST00000638035 1849 ntAPPRIS P3 TSL 5 BASIC21.09■□□□□ 0.97
CHMP2AO43633 AC013268.5-201ENST00000454928 1959 ntTSL 2 BASIC21.09■□□□□ 0.97
CHMP2AO43633 NME1-202ENST00000336097 986 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
CHMP2AO43633 ENSA-205ENST00000361532 792 ntTSL 2 BASIC21.09■□□□□ 0.97
CHMP2AO43633 NME1-203ENST00000393196 940 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
CHMP2AO43633 CDKN2AIPNL-202ENST00000458198 1223 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
CHMP2AO43633 AC009185.1-201ENST00000517634 911 ntTSL 3 BASIC21.09■□□□□ 0.97
CHMP2AO43633 FOSL1-203ENST00000531493 1200 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
CHMP2AO43633 AC011558.1-201ENST00000623459 338 ntBASIC21.09■□□□□ 0.97
CHMP2AO43633 MXD3-202ENST00000427908 2269 ntTSL 2 BASIC21.09■□□□□ 0.97
CHMP2AO43633 USP39-202ENST00000409025 1946 ntTSL 5 BASIC21.09■□□□□ 0.97
CHMP2AO43633 DGKI-202ENST00000424189 4163 ntAPPRIS ALT2 TSL 5 BASIC21.09■□□□□ 0.97
CHMP2AO43633 CCK-202ENST00000396169 1527 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
CHMP2AO43633 CHST2-201ENST00000309575 4582 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
CHMP2AO43633 OCSTAMP-201ENST00000279028 2043 ntAPPRIS P1 TSL 5 BASIC21.08■□□□□ 0.97
CHMP2AO43633 ERLIN2-202ENST00000335171 1742 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
CHMP2AO43633 PRICKLE4-202ENST00000394260 1035 ntAPPRIS ALT2 TSL 2 BASIC21.08■□□□□ 0.97
CHMP2AO43633 PRICKLE4-203ENST00000394263 1155 ntAPPRIS P2 TSL 5 BASIC21.08■□□□□ 0.97
CHMP2AO43633 PMEPA1-204ENST00000395814 800 ntTSL 3 BASIC21.08■□□□□ 0.97
CHMP2AO43633 LINC01063-201ENST00000441644 348 ntTSL 3 BASIC21.08■□□□□ 0.97
CHMP2AO43633 AL441883.1-201ENST00000566170 1045 ntBASIC21.08■□□□□ 0.97
CHMP2AO43633 AC002310.4-201ENST00000568114 377 ntAPPRIS P1 TSL 5 BASIC21.08■□□□□ 0.97
CHMP2AO43633 ULK4P3-205ENST00000568486 1158 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
CHMP2AO43633 WWOX-216ENST00000569818 525 ntBASIC21.08■□□□□ 0.97
CHMP2AO43633 AC140113.3-201ENST00000605663 199 ntBASIC21.08■□□□□ 0.97
CHMP2AO43633 AC064834.1-201ENST00000606986 503 ntTSL 3 BASIC21.08■□□□□ 0.97
CHMP2AO43633 AIRE-201ENST00000291582 2257 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
CHMP2AO43633 DIO1-201ENST00000322679 1658 ntTSL 1 (best) BASIC21.08■□□□□ 0.96
CHMP2AO43633 AL109659.2-201ENST00000606809 1674 ntBASIC21.08■□□□□ 0.96
CHMP2AO43633 DIO1-217ENST00000617230 1656 ntTSL 5 BASIC21.08■□□□□ 0.96
CHMP2AO43633 NEU4-202ENST00000391969 2526 ntAPPRIS P1 TSL 2 BASIC21.08■□□□□ 0.96
CHMP2AO43633 EGFR-202ENST00000342916 2239 ntTSL 1 (best) BASIC21.08■□□□□ 0.96
CHMP2AO43633 CAPN1-226ENST00000533820 3083 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
CHMP2AO43633 CTNNBL1-201ENST00000361383 1925 ntAPPRIS P2 TSL 1 (best) BASIC21.08■□□□□ 0.96
CHMP2AO43633 KCNQ5-203ENST00000355635 6623 ntAPPRIS ALT1 TSL 5 BASIC21.08■□□□□ 0.96
CHMP2AO43633 STX5-202ENST00000377897 1785 ntTSL 1 (best) BASIC21.08■□□□□ 0.96
CHMP2AO43633 PIP4K2A-202ENST00000376573 3802 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
CHMP2AO43633 SLC25A20-201ENST00000319017 1879 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
CHMP2AO43633 ESPN-205ENST00000461727 1869 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
CHMP2AO43633 ZNRF3-203ENST00000544604 6851 ntAPPRIS ALT2 TSL 1 (best) BASIC21.07■□□□□ 0.96
CHMP2AO43633 OSTM1-201ENST00000193322 4467 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
CHMP2AO43633 MCRS1-202ENST00000357123 1428 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
CHMP2AO43633 C19orf25-201ENST00000427685 1410 ntTSL 2 BASIC21.07■□□□□ 0.96
CHMP2AO43633 LRRC4B-202ENST00000599957 3019 ntAPPRIS P1 TSL 3 BASIC21.07■□□□□ 0.96
CHMP2AO43633 RASGRP2-205ENST00000377489 583 ntTSL 3 BASIC21.07■□□□□ 0.96
CHMP2AO43633 LINC01385-201ENST00000512310 780 ntTSL 4 BASIC21.07■□□□□ 0.96
CHMP2AO43633 CDK4-202ENST00000312990 1650 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
CHMP2AO43633 SMARCC2-201ENST00000267064 4076 ntAPPRIS P4 TSL 1 (best) BASIC21.07■□□□□ 0.96
CHMP2AO43633 C11orf80-214ENST00000532565 1948 ntAPPRIS ALT2 TSL 5 BASIC21.07■□□□□ 0.96
CHMP2AO43633 ACVR1B-205ENST00000541224 1791 ntTSL 2 BASIC21.07■□□□□ 0.96
CHMP2AO43633 CLIP2-202ENST00000361545 5445 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
CHMP2AO43633 LDHAL6A-202ENST00000396213 1716 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
CHMP2AO43633 ZFP64-206ENST00000371523 2234 ntTSL 2 BASIC21.06■□□□□ 0.96
CHMP2AO43633 HAGHL-203ENST00000389703 1347 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
CHMP2AO43633 LINC02028-204ENST00000449350 1419 ntTSL 3 BASIC21.06■□□□□ 0.96
CHMP2AO43633 GLRB-207ENST00000541722 2765 ntTSL 5 BASIC21.06■□□□□ 0.96
CHMP2AO43633 NFATC2IP-201ENST00000320805 4569 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
CHMP2AO43633 TMEM106C-202ENST00000429772 1515 ntAPPRIS P1 TSL 2 BASIC21.06■□□□□ 0.96
CHMP2AO43633 AGAP2-AS1-201ENST00000542466 1500 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
CHMP2AO43633 CR769775.1-204ENST00000439760 747 ntTSL 5 BASIC21.06■□□□□ 0.96
CHMP2AO43633 AC012618.3-202ENST00000440004 472 ntTSL 4 BASIC21.06■□□□□ 0.96
CHMP2AO43633 ELOVL2-AS1-202ENST00000456616 903 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
CHMP2AO43633 EHMT1-211ENST00000482340 691 ntTSL 5 BASIC21.06■□□□□ 0.96
CHMP2AO43633 AL132780.2-201ENST00000557615 1021 ntTSL 3 BASIC21.06■□□□□ 0.96
CHMP2AO43633 ATP5D-207ENST00000591660 637 ntAPPRIS P1 TSL 3 BASIC21.06■□□□□ 0.96
CHMP2AO43633 CENPS-CORT-205ENST00000602787 571 ntAPPRIS P1 TSL 3 BASIC21.06■□□□□ 0.96
CHMP2AO43633 IL4I1-202ENST00000391826 1863 ntAPPRIS ALT2 TSL 1 (best) BASIC21.06■□□□□ 0.96
CHMP2AO43633 NGLY1-202ENST00000280700 2473 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
CHMP2AO43633 ICA1-208ENST00000407906 1615 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
CHMP2AO43633 AC129492.1-201ENST00000399413 1804 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
CHMP2AO43633 ATP6V1G2-205ENST00000303892 1588 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
CHMP2AO43633 NUDT16-201ENST00000502852 1552 ntTSL 2 BASIC21.06■□□□□ 0.96
CHMP2AO43633 HDAC11-221ENST00000522202 1559 ntAPPRIS ALT2 TSL 2 BASIC21.06■□□□□ 0.96
CHMP2AO43633 AD000671.2-201ENST00000589807 1925 ntAPPRIS P1 TSL 2 BASIC21.06■□□□□ 0.96
CHMP2AO43633 HDAC4-201ENST00000345617 8976 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
CHMP2AO43633 TRIP4-201ENST00000261884 2045 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
CHMP2AO43633 PCGF6-201ENST00000337211 1950 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
CHMP2AO43633 LYSMD4-202ENST00000344791 2885 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
CHMP2AO43633 GPR62-201ENST00000322241 2191 ntAPPRIS P1 BASIC21.05■□□□□ 0.96
CHMP2AO43633 PTPRK-218ENST00000525459 1722 ntTSL 2 BASIC21.05■□□□□ 0.96
CHMP2AO43633 OXT-201ENST00000217386 513 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
CHMP2AO43633 LCN8-201ENST00000371688 867 ntAPPRIS P2 TSL 1 (best) BASIC21.05■□□□□ 0.96
CHMP2AO43633 RNF152P1-201ENST00000397754 604 ntBASIC21.05■□□□□ 0.96
CHMP2AO43633 LINC01534-202ENST00000433232 554 ntTSL 3 BASIC21.05■□□□□ 0.96
CHMP2AO43633 AL513320.1-201ENST00000435049 622 ntTSL 3 BASIC21.05■□□□□ 0.96
CHMP2AO43633 AL109797.1-201ENST00000452501 835 ntTSL 2 BASIC21.05■□□□□ 0.96
CHMP2AO43633 MTHFS-202ENST00000559722 948 ntTSL 2 BASIC21.05■□□□□ 0.96
CHMP2AO43633 AC068587.9-201ENST00000641814 219 ntBASIC21.05■□□□□ 0.96
CHMP2AO43633 CHTOP-207ENST00000614256 1840 ntTSL 3 BASIC21.05■□□□□ 0.96
CHMP2AO43633 NAT16-201ENST00000300303 2935 ntAPPRIS P2 TSL 2 BASIC21.05■□□□□ 0.96
Retrieved 100 of 98,524 protein–RNA pairs in 95.5 ms