Protein–RNA interactions for Protein: O43567

RNF13, E3 ubiquitin-protein ligase RNF13, humanhuman

Predictions only

Length 381 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF13O43567 SOCS3-201ENST00000330871 2734 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
RNF13O43567 COBLL1-201ENST00000342193 4898 ntAPPRIS P3 TSL 1 (best) BASIC17.09■□□□□ 0.33
RNF13O43567 CLSTN1-202ENST00000377298 5221 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
RNF13O43567 KIAA1522-202ENST00000373480 5294 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
RNF13O43567 KIAA1522-203ENST00000373481 5293 ntAPPRIS ALT2 TSL 2 BASIC17.09■□□□□ 0.33
RNF13O43567 ATP5D-201ENST00000215375 997 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
RNF13O43567 CMTM8-201ENST00000307526 1174 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
RNF13O43567 KSR1P1-201ENST00000446298 240 ntBASIC17.09■□□□□ 0.33
RNF13O43567 LRRC75A-AS1-205ENST00000475953 1201 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
RNF13O43567 AMN1-211ENST00000541931 880 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
RNF13O43567 AC007493.2-201ENST00000568427 478 ntTSL 3 BASIC17.09■□□□□ 0.33
RNF13O43567 AC006504.5-207ENST00000586220 487 ntTSL 2 BASIC17.09■□□□□ 0.33
RNF13O43567 AC020922.2-201ENST00000596786 359 ntTSL 4 BASIC17.09■□□□□ 0.33
RNF13O43567 SLC35A2-213ENST00000635015 1008 ntTSL 2 BASIC17.09■□□□□ 0.33
RNF13O43567 AMDHD2-201ENST00000293971 1459 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
RNF13O43567 GAS2L1P1-201ENST00000420145 1480 ntBASIC17.09■□□□□ 0.33
RNF13O43567 KRT16-201ENST00000301653 1644 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
RNF13O43567 PNKP-207ENST00000596014 1665 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
RNF13O43567 WNT6-201ENST00000233948 1703 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
RNF13O43567 CYP2F1-201ENST00000331105 1720 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
RNF13O43567 LINC00511-201ENST00000453722 1716 ntTSL 2 BASIC17.09■□□□□ 0.33
RNF13O43567 ISM2-207ENST00000493585 1739 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
RNF13O43567 TMEM235-203ENST00000550981 1786 ntTSL 2 BASIC17.09■□□□□ 0.33
RNF13O43567 AL354751.1-201ENST00000412768 1863 ntBASIC17.09■□□□□ 0.33
RNF13O43567 SENP2-201ENST00000296257 5717 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
RNF13O43567 NKD2-201ENST00000274150 1940 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
RNF13O43567 SIL1-202ENST00000394817 1923 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
RNF13O43567 TSGA10IP-203ENST00000532620 1925 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
RNF13O43567 DCST1-204ENST00000423025 2199 ntAPPRIS ALT2 TSL 2 BASIC17.09■□□□□ 0.33
RNF13O43567 MEPCE-202ENST00000414441 2261 ntTSL 2 BASIC17.09■□□□□ 0.33
RNF13O43567 IFRD2-204ENST00000436390 2275 ntAPPRIS P1 TSL 2 BASIC17.09■□□□□ 0.33
RNF13O43567 CMIP-209ENST00000566513 2288 ntTSL 5 BASIC17.09■□□□□ 0.33
RNF13O43567 NAA35-201ENST00000361671 2649 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
RNF13O43567 PACS2-203ENST00000447393 6365 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
RNF13O43567 HEBP2-204ENST00000607197 10014 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
RNF13O43567 FAM222A-202ENST00000538780 3294 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
RNF13O43567 AL133373.2-201ENST00000623187 2828 ntBASIC17.08■□□□□ 0.33
RNF13O43567 SERPINE2-201ENST00000258405 2195 ntAPPRIS P3 TSL 1 (best) BASIC17.08■□□□□ 0.33
RNF13O43567 SRSF2-202ENST00000359995 1927 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
RNF13O43567 BICRA-201ENST00000396720 5739 ntAPPRIS P2 TSL 5 BASIC17.08■□□□□ 0.33
RNF13O43567 RASSF1-210ENST00000616212 1842 ntTSL 2 BASIC17.08■□□□□ 0.33
RNF13O43567 EFTUD1P1-204ENST00000560401 1798 ntBASIC17.08■□□□□ 0.33
RNF13O43567 LIN28B-AS1-203ENST00000636682 1797 ntTSL 3 BASIC17.08■□□□□ 0.33
RNF13O43567 CCDC106-201ENST00000308964 1546 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
RNF13O43567 TH-202ENST00000333684 1535 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
RNF13O43567 MAP4K4-202ENST00000324219 7526 ntTSL 5 BASIC17.08■□□□□ 0.32
RNF13O43567 CACNA1A-215ENST00000635727 7536 ntAPPRIS ALT2 TSL 5 BASIC17.08■□□□□ 0.32
RNF13O43567 EDA-208ENST00000524573 1381 ntAPPRIS ALT1 TSL 1 (best) BASIC17.08■□□□□ 0.32
RNF13O43567 DDX42-202ENST00000389924 3939 ntAPPRIS P1 TSL 5 BASIC17.08■□□□□ 0.32
RNF13O43567 KRTCAP3-201ENST00000288873 872 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
RNF13O43567 BOLA1-203ENST00000369153 1096 ntAPPRIS P1 TSL 3 BASIC17.08■□□□□ 0.32
RNF13O43567 F8A2-201ENST00000369505 1116 ntAPPRIS P1 BASIC17.08■□□□□ 0.32
RNF13O43567 FAM86C1-203ENST00000426628 952 ntAPPRIS ALT2 TSL 2 BASIC17.08■□□□□ 0.32
RNF13O43567 RPS2P4-201ENST00000476944 856 ntBASIC17.08■□□□□ 0.32
RNF13O43567 TNFRSF18-204ENST00000486728 727 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.32
RNF13O43567 Z85996.1-201ENST00000494644 937 ntBASIC17.08■□□□□ 0.32
RNF13O43567 PTTG1-205ENST00000520452 895 ntAPPRIS P1 TSL 3 BASIC17.08■□□□□ 0.32
RNF13O43567 BAALC-AS1-207ENST00000522856 594 ntTSL 3 BASIC17.08■□□□□ 0.32
RNF13O43567 AP003501.2-201ENST00000524433 477 ntTSL 4 BASIC17.08■□□□□ 0.32
RNF13O43567 C19orf25-213ENST00000592872 1287 ntAPPRIS P1 TSL 2 BASIC17.08■□□□□ 0.32
RNF13O43567 SPIB-206ENST00000596074 847 ntTSL 2 BASIC17.08■□□□□ 0.32
RNF13O43567 AC010531.6-201ENST00000602282 401 ntTSL 2 BASIC17.08■□□□□ 0.32
RNF13O43567 AL353708.3-201ENST00000610272 989 ntBASIC17.08■□□□□ 0.32
RNF13O43567 AL359736.2-201ENST00000621992 437 ntBASIC17.08■□□□□ 0.32
RNF13O43567 AC004816.2-201ENST00000622856 284 ntTSL 5 BASIC17.08■□□□□ 0.32
RNF13O43567 ZNF274-203ENST00000424679 2539 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
RNF13O43567 CYR61-201ENST00000451137 2290 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
RNF13O43567 KANSL1L-203ENST00000418791 3562 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
RNF13O43567 KRBOX1-AS1-201ENST00000447834 2134 ntTSL 2 BASIC17.08■□□□□ 0.32
RNF13O43567 POFUT2-201ENST00000331343 4825 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
RNF13O43567 AL512353.2-201ENST00000448759 1962 ntBASIC17.08■□□□□ 0.32
RNF13O43567 EIF4ENIF1-202ENST00000344710 3115 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
RNF13O43567 HERPUD2-202ENST00000396081 3057 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
RNF13O43567 TRIM63-201ENST00000374272 1770 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
RNF13O43567 SIGLEC10-204ENST00000436984 1776 ntTSL 2 BASIC17.07■□□□□ 0.32
RNF13O43567 TMC6-203ENST00000392467 2833 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
RNF13O43567 ZNF696-201ENST00000330143 2795 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
RNF13O43567 FAM219B-204ENST00000563119 2721 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
RNF13O43567 NSMAF-202ENST00000427130 3371 ntTSL 2 BASIC17.07■□□□□ 0.32
RNF13O43567 KRT16P1-201ENST00000399124 1418 ntBASIC17.07■□□□□ 0.32
RNF13O43567 GPBAR1-202ENST00000519574 1382 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
RNF13O43567 SLC6A18-201ENST00000324642 2121 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
RNF13O43567 PTPA-216ENST00000432651 857 ntTSL 2 BASIC17.07■□□□□ 0.32
RNF13O43567 STK24-AS1-201ENST00000434547 1278 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
RNF13O43567 SERTAD4-AS1-201ENST00000437764 726 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
RNF13O43567 AL590666.2-201ENST00000448869 758 ntTSL 2 BASIC17.07■□□□□ 0.32
RNF13O43567 FDX2-207ENST00000494368 584 ntTSL 4 BASIC17.07■□□□□ 0.32
RNF13O43567 HGNC:18790-208ENST00000506380 798 ntAPPRIS P1 TSL 3 BASIC17.07■□□□□ 0.32
RNF13O43567 FAM213B-215ENST00000537325 1096 ntAPPRIS ALT2 TSL 2 BASIC17.07■□□□□ 0.32
RNF13O43567 ZNF667-AS1-206ENST00000591797 535 ntTSL 5 BASIC17.07■□□□□ 0.32
RNF13O43567 CR392000.1-201ENST00000624770 1228 ntBASIC17.07■□□□□ 0.32
RNF13O43567 RHOU-201ENST00000366691 4372 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
RNF13O43567 DHRS12-201ENST00000218981 1970 ntTSL 2 BASIC17.07■□□□□ 0.32
RNF13O43567 CNTNAP3-204ENST00000377656 4986 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
RNF13O43567 ZNF419-207ENST00000442920 1857 ntAPPRIS ALT2 TSL 2 BASIC17.07■□□□□ 0.32
RNF13O43567 ISLR2-201ENST00000361742 4817 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
RNF13O43567 STOML1-209ENST00000564777 1849 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
RNF13O43567 PCDHB18P-201ENST00000524813 2368 ntBASIC17.07■□□□□ 0.32
RNF13O43567 PCGF3-208ENST00000470161 1652 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
RNF13O43567 AP003774.1-201ENST00000316124 2340 ntTSL 2 BASIC17.07■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 19.6 ms