Protein–RNA interactions for Protein: O14917

PCDH17, Protocadherin-17, humanhuman

Predictions only

Length 1,159 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH17O14917 ETV2-203ENST00000402764 1487 ntAPPRIS P3 TSL 1 (best) BASIC17.9■□□□□ 0.46
PCDH17O14917 LGALS8-AS1-201ENST00000487567 1457 ntBASIC17.9■□□□□ 0.46
PCDH17O14917 SLC29A4-202ENST00000396872 5685 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
PCDH17O14917 ADK-206ENST00000541550 2222 ntTSL 2 BASIC17.9■□□□□ 0.46
PCDH17O14917 ST3GAL3-201ENST00000262915 2470 ntTSL 5 BASIC17.9■□□□□ 0.46
PCDH17O14917 P3H1-204ENST00000397054 2705 ntAPPRIS ALT2 TSL 1 (best) BASIC17.9■□□□□ 0.46
PCDH17O14917 ENTPD6-202ENST00000360031 2766 ntAPPRIS ALT2 TSL 1 (best) BASIC17.9■□□□□ 0.46
PCDH17O14917 AC138932.1-201ENST00000534164 6830 ntBASIC17.9■□□□□ 0.46
PCDH17O14917 CHCHD6-201ENST00000290913 1006 ntAPPRIS P2 TSL 1 (best) BASIC17.9■□□□□ 0.46
PCDH17O14917 GLRX2-201ENST00000367439 701 ntAPPRIS ALT2 TSL 1 (best) BASIC17.9■□□□□ 0.46
PCDH17O14917 CKS1B-203ENST00000368439 912 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
PCDH17O14917 DHRS4L2-202ENST00000397071 1117 ntTSL 2 BASIC17.9■□□□□ 0.46
PCDH17O14917 FP565260.3-205ENST00000620481 816 ntTSL 5 BASIC17.9■□□□□ 0.46
PCDH17O14917 MLX-201ENST00000246912 2586 ntAPPRIS P3 TSL 1 (best) BASIC17.9■□□□□ 0.46
PCDH17O14917 CAB39-203ENST00000410084 1324 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
PCDH17O14917 ARHGAP23-222ENST00000622683 5964 ntAPPRIS P2 TSL 5 BASIC17.9■□□□□ 0.46
PCDH17O14917 PGR-201ENST00000263463 2496 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
PCDH17O14917 LGALS9-202ENST00000313648 1378 ntTSL 3 BASIC17.9■□□□□ 0.46
PCDH17O14917 GTF3C5-201ENST00000342018 1905 ntTSL 5 BASIC17.9■□□□□ 0.46
PCDH17O14917 CDK11A-205ENST00000378633 2458 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
PCDH17O14917 SYBU-232ENST00000533171 2498 ntAPPRIS ALT2 TSL 2 BASIC17.9■□□□□ 0.46
PCDH17O14917 ELOC-209ENST00000602840 2780 ntTSL 5 BASIC17.9■□□□□ 0.46
PCDH17O14917 C2orf81-201ENST00000290390 2227 ntAPPRIS P5 TSL 5 BASIC17.9■□□□□ 0.46
PCDH17O14917 KCNK4-202ENST00000422670 1697 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
PCDH17O14917 HIKESHI-207ENST00000533986 1694 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
PCDH17O14917 CASR-204ENST00000638421 5088 ntAPPRIS P1 TSL 5 BASIC17.9■□□□□ 0.46
PCDH17O14917 AC073508.3-201ENST00000619697 1419 ntBASIC17.89■□□□□ 0.46
PCDH17O14917 ISM2-207ENST00000493585 1739 ntTSL 1 (best) BASIC17.89■□□□□ 0.46
PCDH17O14917 LRCH3-207ENST00000441090 2034 ntTSL 2 BASIC17.89■□□□□ 0.46
PCDH17O14917 OTOP3-201ENST00000328801 2363 ntAPPRIS P1 TSL 2 BASIC17.89■□□□□ 0.45
PCDH17O14917 PPP1R12C-202ENST00000435544 2363 ntTSL 2 BASIC17.89■□□□□ 0.45
PCDH17O14917 AC020922.1-201ENST00000591954 3058 ntAPPRIS P1 TSL 5 BASIC17.89■□□□□ 0.45
PCDH17O14917 UBE2QL1-201ENST00000399816 4317 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
PCDH17O14917 FIP1L1-202ENST00000337488 2198 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
PCDH17O14917 FIP1L1-203ENST00000358575 2180 ntAPPRIS P4 TSL 2 BASIC17.89■□□□□ 0.45
PCDH17O14917 MSLN-202ENST00000545450 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC17.89■□□□□ 0.45
PCDH17O14917 B3GALNT2-201ENST00000313984 1874 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
PCDH17O14917 LRRC23-202ENST00000323702 1208 ntAPPRIS ALT2 TSL 1 (best) BASIC17.89■□□□□ 0.45
PCDH17O14917 TRPT1-202ENST00000394546 1058 ntAPPRIS ALT1 TSL 5 BASIC17.89■□□□□ 0.45
PCDH17O14917 SHBG-203ENST00000416273 1042 ntAPPRIS ALT2 TSL 3 BASIC17.89■□□□□ 0.45
PCDH17O14917 ABHD14B-208ENST00000525795 980 ntAPPRIS P1 TSL 3 BASIC17.89■□□□□ 0.45
PCDH17O14917 TRPT1-210ENST00000541278 941 ntTSL 2 BASIC17.89■□□□□ 0.45
PCDH17O14917 CDKN3-209ENST00000556102 938 ntTSL 5 BASIC17.89■□□□□ 0.45
PCDH17O14917 AL929554.1-201ENST00000568665 460 ntAPPRIS P1 TSL 3 BASIC17.89■□□□□ 0.45
PCDH17O14917 SHBG-215ENST00000575903 1196 ntTSL 3 BASIC17.89■□□□□ 0.45
PCDH17O14917 AC002094.1-201ENST00000591482 1050 ntTSL 2 BASIC17.89■□□□□ 0.45
PCDH17O14917 FAM87A-204ENST00000613235 858 ntBASIC17.89■□□□□ 0.45
PCDH17O14917 EMX2-203ENST00000553456 2897 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
PCDH17O14917 WNK1-203ENST00000447667 1902 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
PCDH17O14917 AC007613.1-201ENST00000572811 2597 ntBASIC17.89■□□□□ 0.45
PCDH17O14917 MYEOV-201ENST00000308946 2287 ntAPPRIS P3 TSL 1 (best) BASIC17.89■□□□□ 0.45
PCDH17O14917 PSAP-205ENST00000610929 1969 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
PCDH17O14917 DDAH2-211ENST00000375787 1330 ntAPPRIS P1 TSL 5 BASIC17.89■□□□□ 0.45
PCDH17O14917 FLYWCH1-201ENST00000253928 5037 ntAPPRIS ALT2 TSL 1 (best) BASIC17.89■□□□□ 0.45
PCDH17O14917 EARS2-210ENST00000564501 2027 ntTSL 5 BASIC17.89■□□□□ 0.45
PCDH17O14917 PSPC1-206ENST00000619300 2013 ntAPPRIS P1 TSL 5 BASIC17.89■□□□□ 0.45
PCDH17O14917 PGP-201ENST00000333503 2727 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
PCDH17O14917 ZNF668-202ENST00000394983 2717 ntAPPRIS P1 TSL 5 BASIC17.89■□□□□ 0.45
PCDH17O14917 COLCA2-201ENST00000398035 1414 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
PCDH17O14917 PTPRJ-207ENST00000613246 7851 ntAPPRIS ALT2 TSL 5 BASIC17.89■□□□□ 0.45
PCDH17O14917 P2RY6-203ENST00000393591 1829 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
PCDH17O14917 MAP3K11-210ENST00000532507 1812 ntTSL 2 BASIC17.88■□□□□ 0.45
PCDH17O14917 AC141586.3-201ENST00000562166 1838 ntBASIC17.88■□□□□ 0.45
PCDH17O14917 NPTX1-201ENST00000306773 5122 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
PCDH17O14917 C1orf210-202ENST00000523677 1478 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
PCDH17O14917 SYNDIG1L-201ENST00000331628 2607 ntAPPRIS P1 TSL 5 BASIC17.88■□□□□ 0.45
PCDH17O14917 TH-203ENST00000352909 1889 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
PCDH17O14917 TH-205ENST00000381175 1898 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
PCDH17O14917 ABCC6-209ENST00000640696 1893 ntTSL 5 BASIC17.88■□□□□ 0.45
PCDH17O14917 TEPSIN-201ENST00000300714 2287 ntAPPRIS P2 TSL 1 (best) BASIC17.88■□□□□ 0.45
PCDH17O14917 ACVR1B-201ENST00000257963 4563 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
PCDH17O14917 ALDH7A1-215ENST00000553117 1935 ntTSL 2 BASIC17.88■□□□□ 0.45
PCDH17O14917 LMNB1-202ENST00000395354 1572 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
PCDH17O14917 TUBA3FP-202ENST00000422086 1974 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
PCDH17O14917 PPP1R3F-202ENST00000376188 2443 ntTSL 2 BASIC17.88■□□□□ 0.45
PCDH17O14917 ABHD13-201ENST00000375898 5338 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
PCDH17O14917 LONP1-215ENST00000593119 2918 ntTSL 2 BASIC17.88■□□□□ 0.45
PCDH17O14917 HOXB6-201ENST00000225648 1660 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
PCDH17O14917 TMIGD2-201ENST00000301272 1262 ntAPPRIS P3 TSL 1 (best) BASIC17.88■□□□□ 0.45
PCDH17O14917 EGLN2-201ENST00000303961 2102 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
PCDH17O14917 HAGLR-204ENST00000425005 623 ntTSL 3 BASIC17.88■□□□□ 0.45
PCDH17O14917 RNF144A-AS1-204ENST00000437589 618 ntTSL 2 BASIC17.88■□□□□ 0.45
PCDH17O14917 AC007663.1-201ENST00000438948 1240 ntBASIC17.88■□□□□ 0.45
PCDH17O14917 MCRIP1-206ENST00000573478 1123 ntTSL 2 BASIC17.88■□□□□ 0.45
PCDH17O14917 RNF165-206ENST00000590330 1049 ntTSL 2 BASIC17.88■□□□□ 0.45
PCDH17O14917 QKI-203ENST00000361752 9463 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
PCDH17O14917 RPL7-202ENST00000396465 1308 ntTSL 3 BASIC17.88■□□□□ 0.45
PCDH17O14917 RAPH1-211ENST00000457812 2673 ntAPPRIS ALT2 TSL 2 BASIC17.88■□□□□ 0.45
PCDH17O14917 PGAM1-201ENST00000334828 1830 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
PCDH17O14917 KRT8P11-201ENST00000409686 1436 ntBASIC17.88■□□□□ 0.45
PCDH17O14917 UPP1-201ENST00000331803 1932 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
PCDH17O14917 ZIC4-209ENST00000473123 1481 ntAPPRIS P1 TSL 2 BASIC17.88■□□□□ 0.45
PCDH17O14917 SLC47A1-202ENST00000395585 1998 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
PCDH17O14917 SEPHS1-206ENST00000545675 2988 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
PCDH17O14917 COPS7A-204ENST00000534947 2034 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
PCDH17O14917 RHBDL1-201ENST00000219551 1560 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
PCDH17O14917 AC104581.1-202ENST00000635932 2618 ntBASIC17.87■□□□□ 0.45
PCDH17O14917 NECAB1-201ENST00000417640 5289 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
PCDH17O14917 PHF12-202ENST00000332830 4759 ntAPPRIS P1 TSL 2 BASIC17.87■□□□□ 0.45
PCDH17O14917 ETS1-207ENST00000531611 2134 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
Retrieved 100 of 98,524 protein–RNA pairs in 27.9 ms