Protein–RNA interactions for Protein: O14627

CDX4, Homeobox protein CDX-4, humanhuman

Predicted RBP Predictions only

Length 284 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDX4O14627 TTLL12-204ENST00000494035 888 ntTSL 2 BASIC18.06■□□□□ 0.48
CDX4O14627 FAM57A-205ENST00000572018 373 ntTSL 3 BASIC18.06■□□□□ 0.48
CDX4O14627 SKIDA1-201ENST00000444772 2667 ntAPPRIS ALT2 TSL 5 BASIC18.06■□□□□ 0.48
CDX4O14627 CA11-201ENST00000084798 1844 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
CDX4O14627 DGKQ-201ENST00000273814 4636 ntAPPRIS P2 TSL 1 (best) BASIC18.06■□□□□ 0.48
CDX4O14627 AP000679.1-202ENST00000319763 2081 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
CDX4O14627 ZNF513-202ENST00000407879 2077 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
CDX4O14627 LINC00565-201ENST00000562710 2331 ntBASIC18.06■□□□□ 0.48
CDX4O14627 TREX1-205ENST00000625293 1783 ntBASIC18.06■□□□□ 0.48
CDX4O14627 SEMA6B-202ENST00000586965 2034 ntAPPRIS ALT2 TSL 1 (best) BASIC18.06■□□□□ 0.48
CDX4O14627 INO80E-201ENST00000304516 1489 ntTSL 2 BASIC18.06■□□□□ 0.48
CDX4O14627 RPRM-201ENST00000325926 1471 ntAPPRIS P1 BASIC18.06■□□□□ 0.48
CDX4O14627 C7orf43-201ENST00000316937 2520 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
CDX4O14627 CCND3-204ENST00000414200 1724 ntTSL 2 BASIC18.06■□□□□ 0.48
CDX4O14627 TCF3-203ENST00000395423 2779 ntTSL 5 BASIC18.06■□□□□ 0.48
CDX4O14627 ASAP2-202ENST00000315273 5582 ntAPPRIS ALT2 TSL 1 (best) BASIC18.06■□□□□ 0.48
CDX4O14627 KCNK12-201ENST00000327876 6227 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
CDX4O14627 ZBTB7B-201ENST00000292176 2129 ntAPPRIS P3 TSL 1 (best) BASIC18.05■□□□□ 0.48
CDX4O14627 AC114490.1-202ENST00000311990 1887 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
CDX4O14627 AKNA-205ENST00000374079 2138 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
CDX4O14627 CIRBP-202ENST00000413636 1606 ntTSL 2 BASIC18.05■□□□□ 0.48
CDX4O14627 SERPINB6-207ENST00000612421 1570 ntTSL 2 BASIC18.05■□□□□ 0.48
CDX4O14627 STK11-205ENST00000586243 2777 ntAPPRIS ALT2 TSL 5 BASIC18.05■□□□□ 0.48
CDX4O14627 MSC-201ENST00000325509 2023 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
CDX4O14627 DYRK3-202ENST00000367108 2218 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
CDX4O14627 CACNG8-201ENST00000270458 8747 ntAPPRIS ALT2 TSL 1 (best) BASIC18.05■□□□□ 0.48
CDX4O14627 LAMTOR5-201ENST00000256644 868 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
CDX4O14627 ADIPOR1-202ENST00000367254 1116 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
CDX4O14627 LAMTOR5-204ENST00000483260 694 ntTSL 2 BASIC18.05■□□□□ 0.48
CDX4O14627 PGAM5P1-201ENST00000518923 814 ntBASIC18.05■□□□□ 0.48
CDX4O14627 GABARAP-204ENST00000571253 837 ntTSL 2 BASIC18.05■□□□□ 0.48
CDX4O14627 ANAPC11-210ENST00000574924 722 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
CDX4O14627 AC055811.1-201ENST00000584203 1231 ntTSL 5 BASIC18.05■□□□□ 0.48
CDX4O14627 CIRBP-235ENST00000591935 746 ntAPPRIS ALT1 TSL 3 BASIC18.05■□□□□ 0.48
CDX4O14627 SYNGR4-204ENST00000601610 859 ntTSL 3 BASIC18.05■□□□□ 0.48
CDX4O14627 LAMTOR5-206ENST00000602318 634 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
CDX4O14627 PRKN-208ENST00000610470 531 ntTSL 2 BASIC18.05■□□□□ 0.48
CDX4O14627 PRKN-209ENST00000612485 225 ntTSL 5 BASIC18.05■□□□□ 0.48
CDX4O14627 ANO2-212ENST00000612575 1087 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
CDX4O14627 AL691403.2-201ENST00000618460 490 ntBASIC18.05■□□□□ 0.48
CDX4O14627 FOXP1-223ENST00000622151 429 ntTSL 3 BASIC18.05■□□□□ 0.48
CDX4O14627 AC055717.3-201ENST00000622967 595 ntBASIC18.05■□□□□ 0.48
CDX4O14627 FAM215A-202ENST00000632077 792 ntBASIC18.05■□□□□ 0.48
CDX4O14627 CTDP1-208ENST00000613122 5866 ntAPPRIS P3 TSL 1 (best) BASIC18.05■□□□□ 0.48
CDX4O14627 IFNLR1-205ENST00000374421 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC18.05■□□□□ 0.48
CDX4O14627 CTNNBL1-201ENST00000361383 1925 ntAPPRIS P2 TSL 1 (best) BASIC18.05■□□□□ 0.48
CDX4O14627 KLHL21-206ENST00000610898 1945 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
CDX4O14627 CAMKV-205ENST00000467248 1688 ntTSL 2 BASIC18.05■□□□□ 0.48
CDX4O14627 KLF9-201ENST00000377126 5175 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
CDX4O14627 FAM83D-201ENST00000619304 2475 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
CDX4O14627 ELMOD1-206ENST00000531234 1832 ntTSL 2 BASIC18.05■□□□□ 0.48
CDX4O14627 MAP3K11-210ENST00000532507 1812 ntTSL 2 BASIC18.05■□□□□ 0.48
CDX4O14627 FUCA1-201ENST00000374479 2047 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
CDX4O14627 DLK2-203ENST00000372488 1590 ntAPPRIS P3 TSL 1 (best) BASIC18.04■□□□□ 0.48
CDX4O14627 SNRPN-207ENST00000554227 1763 ntTSL 5 BASIC18.04■□□□□ 0.48
CDX4O14627 AL512380.2-201ENST00000637901 1780 ntTSL 5 BASIC18.04■□□□□ 0.48
CDX4O14627 HMOX2-218ENST00000619913 1908 ntAPPRIS P1 TSL 5 BASIC18.04■□□□□ 0.48
CDX4O14627 OTOP2-201ENST00000331427 2147 ntAPPRIS P1 TSL 5 BASIC18.04■□□□□ 0.48
CDX4O14627 MTMR14-201ENST00000296003 2494 ntAPPRIS P4 TSL 1 (best) BASIC18.04■□□□□ 0.48
CDX4O14627 PABPC4-204ENST00000372862 2470 ntTSL 5 BASIC18.04■□□□□ 0.48
CDX4O14627 AC006333.2-201ENST00000607957 2099 ntBASIC18.04■□□□□ 0.48
CDX4O14627 IDH3G-201ENST00000217901 1485 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
CDX4O14627 ST8SIA5-202ENST00000536490 1499 ntTSL 2 BASIC18.04■□□□□ 0.48
CDX4O14627 KRT89P-201ENST00000620027 1478 ntBASIC18.04■□□□□ 0.48
CDX4O14627 GGCT-205ENST00000409436 954 ntTSL 3 BASIC18.04■□□□□ 0.48
CDX4O14627 MCCC2-205ENST00000509358 1214 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
CDX4O14627 REEP1-209ENST00000541910 969 ntTSL 2 BASIC18.04■□□□□ 0.48
CDX4O14627 AC010632.1-201ENST00000590376 572 ntTSL 4 BASIC18.04■□□□□ 0.48
CDX4O14627 LDHAL6A-203ENST00000615355 1042 ntTSL 5 BASIC18.04■□□□□ 0.48
CDX4O14627 AC034236.2-201ENST00000606662 1610 ntBASIC18.04■□□□□ 0.48
CDX4O14627 SLC22A17-211ENST00000637426 1563 ntAPPRIS ALT2 TSL 1 (best) BASIC18.04■□□□□ 0.48
CDX4O14627 IL17RC-205ENST00000413608 2147 ntAPPRIS ALT2 TSL 1 (best) BASIC18.04■□□□□ 0.48
CDX4O14627 PDZD3-201ENST00000322712 2204 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
CDX4O14627 PHACTR2-208ENST00000440869 2569 ntAPPRIS ALT2 TSL 2 BASIC18.03■□□□□ 0.48
CDX4O14627 CLN3-216ENST00000565316 1318 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
CDX4O14627 TMC6-201ENST00000306591 1681 ntTSL 5 BASIC18.03■□□□□ 0.48
CDX4O14627 KATNBL1P6-202ENST00000562413 1466 ntBASIC18.03■□□□□ 0.48
CDX4O14627 CCDC88B-203ENST00000359902 2326 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
CDX4O14627 SARAF-214ENST00000545648 1976 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
CDX4O14627 C11orf49-201ENST00000278460 1645 ntAPPRIS P3 TSL 1 (best) BASIC18.03■□□□□ 0.48
CDX4O14627 MTX1-202ENST00000368376 1632 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
CDX4O14627 ANKRD37-201ENST00000335174 1141 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
CDX4O14627 ROMO1-201ENST00000336695 496 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
CDX4O14627 INPP5F-203ENST00000369081 874 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
CDX4O14627 MRPS18A-201ENST00000372116 785 ntTSL 2 BASIC18.03■□□□□ 0.48
CDX4O14627 C1QC-203ENST00000374640 1163 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
CDX4O14627 AL022314.1-201ENST00000414203 464 ntTSL 5 BASIC18.03■□□□□ 0.48
CDX4O14627 AP000688.4-201ENST00000436303 446 ntTSL 3 BASIC18.03■□□□□ 0.48
CDX4O14627 HNRNPDP1-201ENST00000439535 754 ntBASIC18.03■□□□□ 0.48
CDX4O14627 LAT-205ENST00000454369 1262 ntAPPRIS ALT2 TSL 5 BASIC18.03■□□□□ 0.48
CDX4O14627 ENDOV-205ENST00000518644 625 ntTSL 4 BASIC18.03■□□□□ 0.48
CDX4O14627 DCTPP1-203ENST00000567983 801 ntTSL 5 BASIC18.03■□□□□ 0.48
CDX4O14627 PRSS8-206ENST00000568261 1214 ntTSL 2 BASIC18.03■□□□□ 0.48
CDX4O14627 NAT14-202ENST00000587400 416 ntTSL 5 BASIC18.03■□□□□ 0.48
CDX4O14627 MED16-213ENST00000616387 1078 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
CDX4O14627 CLEC11A-203ENST00000617718 1128 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
CDX4O14627 AC116407.3-201ENST00000623905 1129 ntBASIC18.03■□□□□ 0.48
CDX4O14627 SLC44A3-203ENST00000446120 2094 ntTSL 2 BASIC18.03■□□□□ 0.48
CDX4O14627 PVRIG-201ENST00000317271 1583 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
CDX4O14627 CLDN6-202ENST00000396925 1739 ntAPPRIS P1 TSL 5 BASIC18.03■□□□□ 0.48
Retrieved 100 of 98,524 protein–RNA pairs in 23 ms