Protein–RNA interactions for Protein: O00570

SOX1, Transcription factor SOX-1, humanhuman

Predicted RBP Predictions only

Length 391 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SOX1O00570 TPSB2-201ENST00000606293 1165 ntAPPRIS ALT2 TSL 1 (best) BASIC19.93■□□□□ 0.78
SOX1O00570 AL365232.1-201ENST00000423730 1636 ntAPPRIS P1 TSL 5 BASIC19.93■□□□□ 0.78
SOX1O00570 ATP5G2-208ENST00000552242 1950 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
SOX1O00570 SCAND1-203ENST00000615116 1371 ntAPPRIS P1 TSL 5 BASIC19.93■□□□□ 0.78
SOX1O00570 CDC14B-208ENST00000463569 1734 ntAPPRIS ALT2 TSL 5 BASIC19.93■□□□□ 0.78
SOX1O00570 JAKMIP1-203ENST00000409371 2420 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
SOX1O00570 DPYS-201ENST00000351513 2127 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
SOX1O00570 ZFC3H1-206ENST00000548100 1771 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
SOX1O00570 PPP1R12C-201ENST00000263433 2924 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
SOX1O00570 C2orf72-201ENST00000373640 3657 ntAPPRIS P1 TSL 2 BASIC19.92■□□□□ 0.78
SOX1O00570 AC092720.2-201ENST00000602388 1665 ntBASIC19.92■□□□□ 0.78
SOX1O00570 SULT2B1-201ENST00000201586 1295 ntAPPRIS P4 TSL 1 (best) BASIC19.92■□□□□ 0.78
SOX1O00570 KLK8-202ENST00000320838 456 ntTSL 5 BASIC19.92■□□□□ 0.78
SOX1O00570 FAM221A-202ENST00000409192 888 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
SOX1O00570 ATP6V0CP3-201ENST00000417255 467 ntBASIC19.92■□□□□ 0.78
SOX1O00570 MCCD1P2-201ENST00000423228 335 ntBASIC19.92■□□□□ 0.78
SOX1O00570 PNPO-202ENST00000434554 1196 ntTSL 2 BASIC19.92■□□□□ 0.78
SOX1O00570 AL359747.1-201ENST00000442370 536 ntTSL 2 BASIC19.92■□□□□ 0.78
SOX1O00570 ICAM2-203ENST00000449662 1221 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
SOX1O00570 EEF1D-223ENST00000528610 923 ntAPPRIS ALT2 TSL 1 (best) BASIC19.92■□□□□ 0.78
SOX1O00570 EEF1D-238ENST00000531621 840 ntTSL 3 BASIC19.92■□□□□ 0.78
SOX1O00570 AP000442.1-201ENST00000533552 769 ntTSL 5 BASIC19.92■□□□□ 0.78
SOX1O00570 AC024563.2-201ENST00000603282 481 ntBASIC19.92■□□□□ 0.78
SOX1O00570 ADORA1-208ENST00000618295 862 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
SOX1O00570 CFP-201ENST00000247153 1713 ntAPPRIS P2 TSL 5 BASIC19.92■□□□□ 0.78
SOX1O00570 MAGED2-206ENST00000375068 2189 ntAPPRIS P2 TSL 1 (best) BASIC19.92■□□□□ 0.78
SOX1O00570 FAM107B-211ENST00000468747 2633 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
SOX1O00570 C8orf76-201ENST00000276704 1341 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
SOX1O00570 PUDP-203ENST00000424830 1334 ntTSL 3 BASIC19.92■□□□□ 0.78
SOX1O00570 CDK2AP2-201ENST00000301488 1378 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
SOX1O00570 KHDC1-202ENST00000370384 1430 ntAPPRIS ALT2 TSL 1 (best) BASIC19.92■□□□□ 0.78
SOX1O00570 ISYNA1-201ENST00000338128 2420 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
SOX1O00570 AP002414.3-201ENST00000589352 1468 ntBASIC19.92■□□□□ 0.78
SOX1O00570 C1QL3-201ENST00000298943 2493 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
SOX1O00570 SYT7-201ENST00000263846 4854 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
SOX1O00570 PDE9A-205ENST00000349112 1616 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
SOX1O00570 LGR4-202ENST00000389858 5163 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
SOX1O00570 ESAM-201ENST00000278927 1826 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
SOX1O00570 CALHM2-201ENST00000260743 1859 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
SOX1O00570 MRPL2-201ENST00000230413 899 ntTSL 2 BASIC19.91■□□□□ 0.78
SOX1O00570 HELT-201ENST00000338875 1008 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
SOX1O00570 BAX-203ENST00000354470 433 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
SOX1O00570 TMEM205-201ENST00000354882 1034 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
SOX1O00570 CCNL2-202ENST00000408918 1186 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
SOX1O00570 BAX-206ENST00000415969 540 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
SOX1O00570 AL162231.1-204ENST00000423809 477 ntAPPRIS ALT2 TSL 3 BASIC19.91■□□□□ 0.78
SOX1O00570 COX6C-204ENST00000520271 571 ntAPPRIS P1 TSL 2 BASIC19.91■□□□□ 0.78
SOX1O00570 AP005019.1-201ENST00000545254 664 ntTSL 3 BASIC19.91■□□□□ 0.78
SOX1O00570 TMEM205-205ENST00000586590 677 ntAPPRIS P1 TSL 5 BASIC19.91■□□□□ 0.78
SOX1O00570 TMEM205-207ENST00000586956 1003 ntAPPRIS P1 TSL 2 BASIC19.91■□□□□ 0.78
SOX1O00570 ZNF773-202ENST00000593916 548 ntTSL 3 BASIC19.91■□□□□ 0.78
SOX1O00570 AC025062.2-201ENST00000605477 670 ntBASIC19.91■□□□□ 0.78
SOX1O00570 AC093028.1-201ENST00000622998 982 ntBASIC19.91■□□□□ 0.78
SOX1O00570 AC008735.5-201ENST00000623544 497 ntBASIC19.91■□□□□ 0.78
SOX1O00570 ANKMY2-206ENST00000628652 1270 ntTSL 5 BASIC19.91■□□□□ 0.78
SOX1O00570 AF228730.6-201ENST00000641497 218 ntBASIC19.91■□□□□ 0.78
SOX1O00570 AC084121.3-201ENST00000641716 218 ntBASIC19.91■□□□□ 0.78
SOX1O00570 AC105233.6-201ENST00000642093 218 ntBASIC19.91■□□□□ 0.78
SOX1O00570 SMIM24-201ENST00000215531 1329 ntAPPRIS P2 TSL 1 (best) BASIC19.91■□□□□ 0.78
SOX1O00570 PACSIN3-211ENST00000539589 2009 ntAPPRIS P1 TSL 2 BASIC19.91■□□□□ 0.78
SOX1O00570 CSF3-206ENST00000577675 1360 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
SOX1O00570 OBSL1-214ENST00000603926 5520 ntTSL 5 BASIC19.91■□□□□ 0.78
SOX1O00570 SEC11C-202ENST00000509791 2054 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
SOX1O00570 DAPK3-201ENST00000301264 2105 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
SOX1O00570 PPT2-248ENST00000395523 2111 ntAPPRIS ALT2 TSL 5 BASIC19.91■□□□□ 0.78
SOX1O00570 WT1-204ENST00000448076 2114 ntAPPRIS ALT2 TSL 2 BASIC19.91■□□□□ 0.78
SOX1O00570 GMPPA-213ENST00000622191 1473 ntTSL 5 BASIC19.91■□□□□ 0.78
SOX1O00570 AC109460.3-201ENST00000569969 5296 ntTSL 2 BASIC19.91■□□□□ 0.78
SOX1O00570 WNT8A-204ENST00000506684 1543 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
SOX1O00570 AC008060.1-201ENST00000401499 1551 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
SOX1O00570 FAM43A-201ENST00000329759 2494 ntAPPRIS P1 BASIC19.91■□□□□ 0.78
SOX1O00570 KCNK13-201ENST00000282146 2522 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
SOX1O00570 KCNIP4-205ENST00000382152 1767 ntTSL 5 BASIC19.9■□□□□ 0.78
SOX1O00570 HRK-201ENST00000257572 5789 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
SOX1O00570 SSX2IP-210ENST00000605755 1933 ntTSL 2 BASIC19.9■□□□□ 0.78
SOX1O00570 SCD5-201ENST00000273908 1995 ntTSL 2 BASIC19.9■□□□□ 0.78
SOX1O00570 FBXW7-202ENST00000281708 4976 ntAPPRIS P4 TSL 1 (best) BASIC19.9■□□□□ 0.78
SOX1O00570 ADAMTS2-202ENST00000274609 2044 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
SOX1O00570 ZSCAN1-201ENST00000282326 2054 ntAPPRIS P1 TSL 2 BASIC19.9■□□□□ 0.78
SOX1O00570 PIGQ-206ENST00000422307 2052 ntTSL 3 BASIC19.9■□□□□ 0.78
SOX1O00570 SLC30A2-201ENST00000374276 2494 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
SOX1O00570 H2AFZ-201ENST00000296417 979 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
SOX1O00570 HIST1H2BL-201ENST00000377401 488 ntAPPRIS P1 BASIC19.9■□□□□ 0.78
SOX1O00570 SNHG11-205ENST00000421599 1046 ntTSL 3 BASIC19.9■□□□□ 0.78
SOX1O00570 RAD51D-205ENST00000460118 1064 ntTSL 5 BASIC19.9■□□□□ 0.78
SOX1O00570 AC135776.2-201ENST00000567803 714 ntTSL 4 BASIC19.9■□□□□ 0.78
SOX1O00570 TMEM220-203ENST00000578345 559 ntAPPRIS ALT2 TSL 2 BASIC19.9■□□□□ 0.78
SOX1O00570 GZMM-202ENST00000592501 941 ntTSL 3 BASIC19.9■□□□□ 0.78
SOX1O00570 AC010615.2-202ENST00000597444 832 ntTSL 3 BASIC19.9■□□□□ 0.78
SOX1O00570 COPE-211ENST00000600932 1144 ntTSL 5 BASIC19.9■□□□□ 0.78
SOX1O00570 TMEM225B-202ENST00000431679 1314 ntAPPRIS P1 TSL 5 BASIC19.9■□□□□ 0.78
SOX1O00570 TMEM25-225ENST00000533102 1410 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
SOX1O00570 SOX10-201ENST00000360880 2861 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
SOX1O00570 SOX10-202ENST00000396884 2879 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
SOX1O00570 INPPL1-201ENST00000298229 4733 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
SOX1O00570 GJA4-201ENST00000342280 1622 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
SOX1O00570 CLDN14-202ENST00000399135 1752 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
SOX1O00570 RNF39-202ENST00000376751 1970 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
SOX1O00570 APBB3-204ENST00000358580 2020 ntTSL 5 BASIC19.9■□□□□ 0.78
SOX1O00570 DBNDD1-201ENST00000002501 2079 ntAPPRIS P1 TSL 2 BASIC19.9■□□□□ 0.78
Retrieved 100 of 98,524 protein–RNA pairs in 33.8 ms