Protein–RNA interactions for Protein: O00151

PDLIM1, PDZ and LIM domain protein 1, humanhuman

Predictions only

Length 329 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM1O00151 RHBDD3-201ENST00000216085 1794 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
PDLIM1O00151 MEST-201ENST00000223215 2465 ntAPPRIS P4 TSL 1 (best) BASIC17.85■□□□□ 0.45
PDLIM1O00151 ISL2-201ENST00000290759 1881 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
PDLIM1O00151 DNAJC11-201ENST00000294401 2210 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
PDLIM1O00151 LIPT2-201ENST00000310109 1018 ntAPPRIS P1 TSL 2 BASIC17.85■□□□□ 0.45
PDLIM1O00151 C17orf58-201ENST00000334461 1535 ntTSL 2 BASIC17.85■□□□□ 0.45
PDLIM1O00151 GDE1-201ENST00000353258 2958 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
PDLIM1O00151 TBX20-201ENST00000408931 1871 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
PDLIM1O00151 U73166.1-201ENST00000439898 2625 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
PDLIM1O00151 DIMT1-202ENST00000506390 1208 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
PDLIM1O00151 NDRG2-227ENST00000554143 1980 ntAPPRIS ALT1 TSL 2 BASIC17.85■□□□□ 0.45
PDLIM1O00151 FAM219B-212ENST00000565772 1249 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
PDLIM1O00151 ISYNA1-206ENST00000578963 1691 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
PDLIM1O00151 SLC35A3-218ENST00000639994 1114 ntTSL 5 BASIC17.85■□□□□ 0.45
PDLIM1O00151 AC068987.5-201ENST00000642069 987 ntAPPRIS P1 BASIC17.85■□□□□ 0.45
PDLIM1O00151 TRIM45-203ENST00000369464 3495 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
PDLIM1O00151 NUDT19-201ENST00000397061 2967 ntAPPRIS P1 TSL 2 BASIC17.85■□□□□ 0.45
PDLIM1O00151 MFSD11-207ENST00000586622 2952 ntAPPRIS P1 TSL 5 BASIC17.85■□□□□ 0.45
PDLIM1O00151 AC004890.2-201ENST00000426347 2419 ntTSL 5 BASIC17.84■□□□□ 0.45
PDLIM1O00151 C2CD2L-205ENST00000528586 2320 ntTSL 2 BASIC17.84■□□□□ 0.45
PDLIM1O00151 DUSP1-201ENST00000239223 2019 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
PDLIM1O00151 HEXDC-203ENST00000577944 1820 ntTSL 5 BASIC17.84■□□□□ 0.45
PDLIM1O00151 SKOR1-204ENST00000554240 3597 ntAPPRIS ALT2 TSL 5 BASIC17.84■□□□□ 0.45
PDLIM1O00151 RNH1-206ENST00000438658 1725 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
PDLIM1O00151 ABHD14A-ACY1-202ENST00000463937 1705 ntAPPRIS ALT2 TSL 5 BASIC17.84■□□□□ 0.45
PDLIM1O00151 CFP-203ENST00000396992 1592 ntAPPRIS P2 TSL 1 (best) BASIC17.84■□□□□ 0.45
PDLIM1O00151 NFIX-205ENST00000585575 1485 ntAPPRIS P1 TSL 5 BASIC17.84■□□□□ 0.45
PDLIM1O00151 ZCCHC18-203ENST00000537356 2907 ntAPPRIS P1 TSL 5 BASIC17.84■□□□□ 0.45
PDLIM1O00151 KIAA1586-203ENST00000545356 2883 ntTSL 2 BASIC17.84■□□□□ 0.45
PDLIM1O00151 DENR-201ENST00000280557 2769 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
PDLIM1O00151 KATNAL2-208ENST00000592005 1348 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
PDLIM1O00151 RIPK2-201ENST00000220751 2584 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
PDLIM1O00151 TMEM97-201ENST00000226230 2568 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
PDLIM1O00151 NENF-201ENST00000366988 949 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
PDLIM1O00151 C2orf82-203ENST00000409533 561 ntAPPRIS P2 TSL 4 BASIC17.84■□□□□ 0.45
PDLIM1O00151 UNC93B6-201ENST00000525262 1143 ntTSL 5 BASIC17.84■□□□□ 0.45
PDLIM1O00151 AC073896.1-201ENST00000549318 937 ntAPPRIS P1 TSL 5 BASIC17.84■□□□□ 0.45
PDLIM1O00151 AC090527.2-201ENST00000564080 1060 ntAPPRIS P1 TSL 3 BASIC17.84■□□□□ 0.45
PDLIM1O00151 PSME3-210ENST00000590720 998 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
PDLIM1O00151 RELL2-201ENST00000297164 2520 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
PDLIM1O00151 STIM2-212ENST00000639640 2241 ntAPPRIS P3 TSL 1 (best) BASIC17.84■□□□□ 0.45
PDLIM1O00151 PLEKHA2-206ENST00000521746 2127 ntTSL 5 BASIC17.84■□□□□ 0.45
PDLIM1O00151 TMEM183A-201ENST00000367242 3019 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
PDLIM1O00151 TMPRSS5-205ENST00000538955 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC17.84■□□□□ 0.45
PDLIM1O00151 ENTPD6-209ENST00000433259 2654 ntTSL 5 BASIC17.84■□□□□ 0.45
PDLIM1O00151 CCNA1-202ENST00000440264 1758 ntAPPRIS P1 TSL 2 BASIC17.84■□□□□ 0.45
PDLIM1O00151 CLUH-201ENST00000435359 5224 ntAPPRIS P2 TSL 5 BASIC17.84■□□□□ 0.45
PDLIM1O00151 HEXDC-201ENST00000327949 1733 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
PDLIM1O00151 IGSF9B-206ENST00000533871 5050 ntAPPRIS P2 TSL 5 BASIC17.83■□□□□ 0.45
PDLIM1O00151 DGKI-203ENST00000446122 4070 ntAPPRIS ALT2 TSL 5 BASIC17.83■□□□□ 0.45
PDLIM1O00151 RHBDL1-202ENST00000352681 1463 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
PDLIM1O00151 DBNDD2-203ENST00000372710 1417 ntTSL 1 (best) BASIC17.83■□□□□ 0.45
PDLIM1O00151 NSFL1C-206ENST00000476071 2800 ntTSL 5 BASIC17.83■□□□□ 0.45
PDLIM1O00151 ESPN-216ENST00000636330 4731 ntAPPRIS ALT2 TSL 5 BASIC17.83■□□□□ 0.45
PDLIM1O00151 AC018755.2-202ENST00000429354 1926 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
PDLIM1O00151 CYYR1-202ENST00000400043 735 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
PDLIM1O00151 GATS-209ENST00000454084 1030 ntTSL 3 BASIC17.83■□□□□ 0.44
PDLIM1O00151 PLEKHB1-216ENST00000543085 632 ntTSL 3 BASIC17.83■□□□□ 0.44
PDLIM1O00151 TIMM50-213ENST00000599794 786 ntTSL 2 BASIC17.83■□□□□ 0.44
PDLIM1O00151 MAPK14-210ENST00000622903 1003 ntTSL 5 BASIC17.83■□□□□ 0.44
PDLIM1O00151 ST3GAL6-214ENST00000483910 1886 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
PDLIM1O00151 AC018695.7-201ENST00000624587 2492 ntBASIC17.83■□□□□ 0.44
PDLIM1O00151 C8orf58-207ENST00000615223 1848 ntAPPRIS ALT2 TSL 5 BASIC17.83■□□□□ 0.44
PDLIM1O00151 KLC1-207ENST00000445352 2416 ntTSL 5 BASIC17.83■□□□□ 0.44
PDLIM1O00151 PIGW-204ENST00000614443 2312 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
PDLIM1O00151 AC013269.1-201ENST00000409259 1653 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
PDLIM1O00151 TISP43-206ENST00000623376 1653 ntAPPRIS ALT2 TSL 1 (best) BASIC17.83■□□□□ 0.44
PDLIM1O00151 NRBP1-204ENST00000379863 2174 ntTSL 5 BASIC17.83■□□□□ 0.44
PDLIM1O00151 PADI2-201ENST00000375481 1607 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
PDLIM1O00151 KCTD20-210ENST00000536244 5345 ntTSL 2 BASIC17.83■□□□□ 0.44
PDLIM1O00151 C21orf91-203ENST00000400559 1593 ntAPPRIS ALT1 TSL 5 BASIC17.83■□□□□ 0.44
PDLIM1O00151 AC116351.2-201ENST00000606540 1585 ntBASIC17.83■□□□□ 0.44
PDLIM1O00151 GYPC-202ENST00000356887 2067 ntAPPRIS ALT2 TSL 1 (best) BASIC17.83■□□□□ 0.44
PDLIM1O00151 C1orf56-201ENST00000368926 2096 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
PDLIM1O00151 ADAM11-203ENST00000535346 2529 ntTSL 2 BASIC17.82■□□□□ 0.44
PDLIM1O00151 HARBI1-201ENST00000326737 1967 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
PDLIM1O00151 DVL1-202ENST00000378891 2926 ntAPPRIS P3 TSL 1 (best) BASIC17.82■□□□□ 0.44
PDLIM1O00151 PRSS35-201ENST00000369700 2440 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
PDLIM1O00151 NIPAL2-202ENST00000430223 4496 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
PDLIM1O00151 AGO4-201ENST00000373210 7116 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
PDLIM1O00151 RENBP-201ENST00000369997 1322 ntTSL 5 BASIC17.82■□□□□ 0.44
PDLIM1O00151 LINC00957-202ENST00000441052 2590 ntTSL 2 BASIC17.82■□□□□ 0.44
PDLIM1O00151 BID-202ENST00000342111 854 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
PDLIM1O00151 CSF1-205ENST00000420111 1083 ntTSL 5 BASIC17.82■□□□□ 0.44
PDLIM1O00151 AC023632.3-201ENST00000521633 145 ntBASIC17.82■□□□□ 0.44
PDLIM1O00151 CD99P1-205ENST00000527459 561 ntBASIC17.82■□□□□ 0.44
PDLIM1O00151 GRAMD2B-218ENST00000542322 2977 ntTSL 2 BASIC17.82■□□□□ 0.44
PDLIM1O00151 AL356020.1-201ENST00000554235 1076 ntTSL 5 BASIC17.82■□□□□ 0.44
PDLIM1O00151 LINC01956-201ENST00000557729 695 ntTSL 5 BASIC17.82■□□□□ 0.44
PDLIM1O00151 AF274858.3-202ENST00000569906 755 ntTSL 3 BASIC17.82■□□□□ 0.44
PDLIM1O00151 BRWD1-AS2-201ENST00000603064 1028 ntBASIC17.82■□□□□ 0.44
PDLIM1O00151 HLA-B-256ENST00000639848 1089 ntBASIC17.82■□□□□ 0.44
PDLIM1O00151 TPBG-203ENST00000543496 2881 ntAPPRIS P1 TSL 2 BASIC17.82■□□□□ 0.44
PDLIM1O00151 MIB2-201ENST00000355826 3290 ntAPPRIS ALT2 TSL 1 (best) BASIC17.82■□□□□ 0.44
PDLIM1O00151 FAM214B-206ENST00000603301 3256 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
PDLIM1O00151 TEKT5-201ENST00000283025 1612 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
PDLIM1O00151 DACH1-202ENST00000613252 5233 ntAPPRIS P2 TSL 1 (best) BASIC17.82■□□□□ 0.44
PDLIM1O00151 WDR41-208ENST00000507029 1553 ntTSL 2 BASIC17.82■□□□□ 0.44
PDLIM1O00151 SBF2-AS1-201ENST00000498905 2709 ntTSL 5 BASIC17.82■□□□□ 0.44
PDLIM1O00151 TRMT6-201ENST00000203001 2327 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Retrieved 100 of 98,524 protein–RNA pairs in 87.9 ms