Protein–RNA interactions for Protein: E9PGA6

C1QTNF3-AMACR, C1QTNF3-AMACR readthrough (NMD candidate), humanhuman

Predictions only

Length 284 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C1QTNF3-AMACRE9PGA6 NR1H2-201ENST00000253727 1998 ntAPPRIS P2 TSL 1 (best) BASIC18.8■□□□□ 0.6
C1QTNF3-AMACRE9PGA6 MED25-201ENST00000312865 2332 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
C1QTNF3-AMACRE9PGA6 HOXB1-202ENST00000577092 1414 ntBASIC18.8■□□□□ 0.6
C1QTNF3-AMACRE9PGA6 UBE2Z-201ENST00000360943 3122 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
C1QTNF3-AMACRE9PGA6 EMD-202ENST00000369842 1379 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
C1QTNF3-AMACRE9PGA6 MLST8-232ENST00000569417 1870 ntAPPRIS P3 TSL 1 (best) BASIC18.8■□□□□ 0.6
C1QTNF3-AMACRE9PGA6 AC104581.1-201ENST00000324348 2852 ntAPPRIS P1 TSL 2 BASIC18.79■□□□□ 0.6
C1QTNF3-AMACRE9PGA6 HNRNPLL-203ENST00000378915 2523 ntTSL 5 BASIC18.79■□□□□ 0.6
C1QTNF3-AMACRE9PGA6 ISYNA1-206ENST00000578963 1691 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
C1QTNF3-AMACRE9PGA6 PRDM5-201ENST00000264808 5330 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
C1QTNF3-AMACRE9PGA6 PGAM1-201ENST00000334828 1830 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
C1QTNF3-AMACRE9PGA6 PITPNB-205ENST00000455418 2963 ntAPPRIS ALT1 TSL 5 BASIC18.79■□□□□ 0.6
C1QTNF3-AMACRE9PGA6 AC034236.2-201ENST00000606662 1610 ntBASIC18.79■□□□□ 0.6
C1QTNF3-AMACRE9PGA6 ZNF582-207ENST00000619584 2297 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
C1QTNF3-AMACRE9PGA6 FAM43B-201ENST00000332947 2572 ntAPPRIS P1 BASIC18.79■□□□□ 0.6
C1QTNF3-AMACRE9PGA6 AC008878.3-201ENST00000617428 4964 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
C1QTNF3-AMACRE9PGA6 HBZP1-201ENST00000354915 429 ntBASIC18.79■□□□□ 0.6
C1QTNF3-AMACRE9PGA6 RNF216P1-205ENST00000406089 807 ntTSL 5 BASIC18.79■□□□□ 0.6
C1QTNF3-AMACRE9PGA6 COPS8-203ENST00000409334 794 ntTSL 5 BASIC18.79■□□□□ 0.6
C1QTNF3-AMACRE9PGA6 AC005091.1-201ENST00000441955 1190 ntTSL 3 BASIC18.79■□□□□ 0.6
C1QTNF3-AMACRE9PGA6 NT5C2-211ENST00000470299 249 ntTSL 5 BASIC18.79■□□□□ 0.6
C1QTNF3-AMACRE9PGA6 C7orf49-209ENST00000483029 596 ntTSL 2 BASIC18.79■□□□□ 0.6
C1QTNF3-AMACRE9PGA6 FAM53C-211ENST00000513056 923 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
C1QTNF3-AMACRE9PGA6 AF186192.2-201ENST00000524514 423 ntTSL 3 BASIC18.79■□□□□ 0.6
C1QTNF3-AMACRE9PGA6 AL807752.6-202ENST00000622933 765 ntAPPRIS P5 TSL 3 BASIC18.79■□□□□ 0.6
C1QTNF3-AMACRE9PGA6 LINC02028-204ENST00000449350 1419 ntTSL 3 BASIC18.79■□□□□ 0.6
C1QTNF3-AMACRE9PGA6 NUDT16-201ENST00000502852 1552 ntTSL 2 BASIC18.79■□□□□ 0.6
C1QTNF3-AMACRE9PGA6 LACTB-202ENST00000413507 2978 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
C1QTNF3-AMACRE9PGA6 SLC34A3-202ENST00000538474 2162 ntAPPRIS P1 TSL 5 BASIC18.79■□□□□ 0.6
C1QTNF3-AMACRE9PGA6 HSPD1-202ENST00000388968 2455 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
C1QTNF3-AMACRE9PGA6 METTL5-207ENST00000410097 1370 ntTSL 2 BASIC18.79■□□□□ 0.6
C1QTNF3-AMACRE9PGA6 CCK-202ENST00000396169 1527 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
C1QTNF3-AMACRE9PGA6 TMEM191A-208ENST00000450925 1961 ntTSL 2 BASIC18.79■□□□□ 0.6
C1QTNF3-AMACRE9PGA6 OTOP3-201ENST00000328801 2363 ntAPPRIS P1 TSL 2 BASIC18.78■□□□□ 0.6
C1QTNF3-AMACRE9PGA6 MAP3K7CL-206ENST00000399928 1904 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
C1QTNF3-AMACRE9PGA6 SMARCC1-201ENST00000254480 6375 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
C1QTNF3-AMACRE9PGA6 NECTIN3-211ENST00000493615 1876 ntAPPRIS ALT2 TSL 2 BASIC18.78■□□□□ 0.6
C1QTNF3-AMACRE9PGA6 CLIP2-201ENST00000223398 5563 ntAPPRIS P1 TSL 5 BASIC18.78■□□□□ 0.6
C1QTNF3-AMACRE9PGA6 C19orf25-201ENST00000427685 1410 ntTSL 2 BASIC18.78■□□□□ 0.6
C1QTNF3-AMACRE9PGA6 ACY1-206ENST00000476351 1409 ntTSL 3 BASIC18.78■□□□□ 0.6
C1QTNF3-AMACRE9PGA6 PAQR4-203ENST00000572687 2251 ntTSL 2 BASIC18.78■□□□□ 0.6
C1QTNF3-AMACRE9PGA6 CD1E-210ENST00000368165 1003 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
C1QTNF3-AMACRE9PGA6 CD1E-211ENST00000368166 1271 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
C1QTNF3-AMACRE9PGA6 TNFRSF10C-202ENST00000397703 1242 ntTSL 2 BASIC18.78■□□□□ 0.6
C1QTNF3-AMACRE9PGA6 CD1E-214ENST00000452291 745 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
C1QTNF3-AMACRE9PGA6 MFGE8-203ENST00000542878 1172 ntTSL 2 BASIC18.78■□□□□ 0.6
C1QTNF3-AMACRE9PGA6 MIR3917-201ENST00000580971 93 ntBASIC18.78■□□□□ 0.6
C1QTNF3-AMACRE9PGA6 AC116407.4-201ENST00000623319 1061 ntBASIC18.78■□□□□ 0.6
C1QTNF3-AMACRE9PGA6 AC068587.9-201ENST00000641814 219 ntBASIC18.78■□□□□ 0.6
C1QTNF3-AMACRE9PGA6 SYNDIG1L-201ENST00000331628 2607 ntAPPRIS P1 TSL 5 BASIC18.78■□□□□ 0.6
C1QTNF3-AMACRE9PGA6 AP2M1-201ENST00000292807 1931 ntAPPRIS P4 TSL 5 BASIC18.78■□□□□ 0.6
C1QTNF3-AMACRE9PGA6 FOXC2-201ENST00000320354 2478 ntAPPRIS P1 BASIC18.78■□□□□ 0.6
C1QTNF3-AMACRE9PGA6 WAS-201ENST00000376701 1849 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
C1QTNF3-AMACRE9PGA6 RBM6-204ENST00000422955 2324 ntTSL 2 BASIC18.77■□□□□ 0.6
C1QTNF3-AMACRE9PGA6 C18orf25-204ENST00000615553 2329 ntTSL 5 BASIC18.77■□□□□ 0.6
C1QTNF3-AMACRE9PGA6 BPTF-201ENST00000306378 9688 ntAPPRIS P2 TSL 1 (best) BASIC18.77■□□□□ 0.6
C1QTNF3-AMACRE9PGA6 RASGRP1-201ENST00000310803 5023 ntAPPRIS P2 TSL 1 (best) BASIC18.77■□□□□ 0.6
C1QTNF3-AMACRE9PGA6 FAM182B-201ENST00000376403 1681 ntAPPRIS P5 TSL 1 (best) BASIC18.77■□□□□ 0.6
C1QTNF3-AMACRE9PGA6 SETMAR-206ENST00000430981 1671 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
C1QTNF3-AMACRE9PGA6 RASGRP1-204ENST00000539159 5021 ntAPPRIS ALT1 TSL 5 BASIC18.77■□□□□ 0.6
C1QTNF3-AMACRE9PGA6 ANXA8-208ENST00000611843 2174 ntTSL 2 BASIC18.77■□□□□ 0.6
C1QTNF3-AMACRE9PGA6 CLN3-202ENST00000355477 1173 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
C1QTNF3-AMACRE9PGA6 NDUFA1-201ENST00000371437 766 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
C1QTNF3-AMACRE9PGA6 AP003396.3-201ENST00000530918 778 ntTSL 5 BASIC18.77■□□□□ 0.6
C1QTNF3-AMACRE9PGA6 PRTN3-202ENST00000544537 1036 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
C1QTNF3-AMACRE9PGA6 PNKP-224ENST00000631020 1545 ntTSL 5 BASIC18.77■□□□□ 0.6
C1QTNF3-AMACRE9PGA6 KCTD13-207ENST00000568000 2528 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
C1QTNF3-AMACRE9PGA6 PDE9A-206ENST00000380328 1875 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
C1QTNF3-AMACRE9PGA6 KRT1-201ENST00000252244 2451 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
C1QTNF3-AMACRE9PGA6 SCD5-201ENST00000273908 1995 ntTSL 2 BASIC18.77■□□□□ 0.59
C1QTNF3-AMACRE9PGA6 KMT5C-201ENST00000255613 2308 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
C1QTNF3-AMACRE9PGA6 DYNC1LI2-201ENST00000258198 4515 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
C1QTNF3-AMACRE9PGA6 SHB-201ENST00000377707 2783 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
C1QTNF3-AMACRE9PGA6 ZACN-201ENST00000334586 1335 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
C1QTNF3-AMACRE9PGA6 DMRT2-204ENST00000382251 2292 ntAPPRIS P1 TSL 5 BASIC18.76■□□□□ 0.59
C1QTNF3-AMACRE9PGA6 WNT5B-203ENST00000537031 1437 ntAPPRIS P1 TSL 2 BASIC18.76■□□□□ 0.59
C1QTNF3-AMACRE9PGA6 RASSF1-201ENST00000327761 1757 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
C1QTNF3-AMACRE9PGA6 STX5-202ENST00000377897 1785 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
C1QTNF3-AMACRE9PGA6 GAMT-202ENST00000447102 1769 ntTSL 2 BASIC18.76■□□□□ 0.59
C1QTNF3-AMACRE9PGA6 CDX4-201ENST00000373514 1515 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
C1QTNF3-AMACRE9PGA6 STXBP2-202ENST00000414284 1859 ntAPPRIS ALT1 TSL 1 (best) BASIC18.76■□□□□ 0.59
C1QTNF3-AMACRE9PGA6 MAPK9-203ENST00000393360 4326 ntTSL 5 BASIC18.76■□□□□ 0.59
C1QTNF3-AMACRE9PGA6 NLRP6-201ENST00000312165 2679 ntAPPRIS P3 TSL 1 (best) BASIC18.76■□□□□ 0.59
C1QTNF3-AMACRE9PGA6 UBE3C-201ENST00000348165 5229 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
C1QTNF3-AMACRE9PGA6 TSPY8-203ENST00000383005 435 ntTSL 5 BASIC18.76■□□□□ 0.59
C1QTNF3-AMACRE9PGA6 SMYD3-204ENST00000403792 1209 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
C1QTNF3-AMACRE9PGA6 LBX1-AS1-203ENST00000454527 740 ntTSL 5 BASIC18.76■□□□□ 0.59
C1QTNF3-AMACRE9PGA6 PDZD7-203ENST00000470414 1057 ntTSL 2 BASIC18.76■□□□□ 0.59
C1QTNF3-AMACRE9PGA6 ZNF706-206ENST00000519744 785 ntTSL 3 BASIC18.76■□□□□ 0.59
C1QTNF3-AMACRE9PGA6 RAB6A-207ENST00000541588 758 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
C1QTNF3-AMACRE9PGA6 KRTCAP3-207ENST00000543753 956 ntAPPRIS P1 TSL 5 BASIC18.76■□□□□ 0.59
C1QTNF3-AMACRE9PGA6 C14orf144-201ENST00000553757 537 ntTSL 4 BASIC18.76■□□□□ 0.59
C1QTNF3-AMACRE9PGA6 AC104390.1-201ENST00000555663 520 ntBASIC18.76■□□□□ 0.59
C1QTNF3-AMACRE9PGA6 FXYD7-203ENST00000586063 456 ntAPPRIS ALT2 TSL 3 BASIC18.76■□□□□ 0.59
C1QTNF3-AMACRE9PGA6 GFOD2-207ENST00000602855 819 ntTSL 3 BASIC18.76■□□□□ 0.59
C1QTNF3-AMACRE9PGA6 AL157888.1-201ENST00000631930 593 ntBASIC18.76■□□□□ 0.59
C1QTNF3-AMACRE9PGA6 NFIL3-201ENST00000297689 2085 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
C1QTNF3-AMACRE9PGA6 ETV7-202ENST00000340181 1719 ntAPPRIS P3 TSL 1 (best) BASIC18.76■□□□□ 0.59
C1QTNF3-AMACRE9PGA6 CD19-206ENST00000567541 1707 ntAPPRIS ALT2 TSL 1 (best) BASIC18.76■□□□□ 0.59
C1QTNF3-AMACRE9PGA6 C1QTNF1-209ENST00000581774 1368 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Retrieved 100 of 98,524 protein–RNA pairs in 43.2 ms