Protein–RNA interactions for Protein: A6NFN3

RBFOX3, RNA binding protein fox-1 homolog 3, humanhuman

Predictions only

Length 312 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RBFOX3A6NFN3 RPRD1A-207ENST00000588737 1264 ntTSL 2 BASIC14.83□□□□□ -0.04
RBFOX3A6NFN3 TPRG1LP1-201ENST00000598702 760 ntBASIC14.83□□□□□ -0.04
RBFOX3A6NFN3 HIBCH-201ENST00000359678 1939 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
RBFOX3A6NFN3 FAM50B-201ENST00000380272 1628 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
RBFOX3A6NFN3 CCDC88C-203ENST00000389856 1641 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
RBFOX3A6NFN3 IL27RA-201ENST00000263379 2962 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
RBFOX3A6NFN3 VSIG10L2-202ENST00000638636 2304 ntAPPRIS P1 TSL 5 BASIC14.83□□□□□ -0.04
RBFOX3A6NFN3 CNTNAP3-201ENST00000297668 5064 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
RBFOX3A6NFN3 NMD3-202ENST00000460469 3061 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
RBFOX3A6NFN3 LUC7L-202ENST00000337351 2097 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
RBFOX3A6NFN3 PHKA1-205ENST00000541944 5944 ntAPPRIS ALT1 TSL 1 (best) BASIC14.83□□□□□ -0.04
RBFOX3A6NFN3 RAB33B-201ENST00000305626 4562 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
RBFOX3A6NFN3 AC104417.2-201ENST00000562989 1793 ntBASIC14.83□□□□□ -0.04
RBFOX3A6NFN3 VARS-215ENST00000375663 4312 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
RBFOX3A6NFN3 NAP1L4-201ENST00000380542 2511 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
RBFOX3A6NFN3 HECTD2-203ENST00000371681 2175 ntTSL 2 BASIC14.83□□□□□ -0.04
RBFOX3A6NFN3 NFE2L3-201ENST00000056233 3686 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
RBFOX3A6NFN3 C6orf106-202ENST00000374023 4418 ntAPPRIS P4 TSL 1 (best) BASIC14.82□□□□□ -0.04
RBFOX3A6NFN3 AC018553.1-201ENST00000616682 1458 ntBASIC14.82□□□□□ -0.04
RBFOX3A6NFN3 CACNA1I-201ENST00000401624 6740 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
RBFOX3A6NFN3 FBXO44-201ENST00000251546 1896 ntTSL 2 BASIC14.82□□□□□ -0.04
RBFOX3A6NFN3 SYVN1-201ENST00000294256 3048 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
RBFOX3A6NFN3 MIB2-202ENST00000378708 3012 ntAPPRIS ALT2 TSL 5 BASIC14.82□□□□□ -0.04
RBFOX3A6NFN3 ALKBH6-213ENST00000486389 1525 ntTSL 3 BASIC14.82□□□□□ -0.04
RBFOX3A6NFN3 AANAT-201ENST00000250615 1913 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
RBFOX3A6NFN3 EIF4G3-205ENST00000400422 5762 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
RBFOX3A6NFN3 BAP1-202ENST00000460680 3937 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
RBFOX3A6NFN3 MFSD1-201ENST00000264266 1594 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
RBFOX3A6NFN3 PIP4K2C-202ENST00000422156 1558 ntTSL 2 BASIC14.82□□□□□ -0.04
RBFOX3A6NFN3 FNBP1-201ENST00000355681 1977 ntTSL 2 BASIC14.82□□□□□ -0.04
RBFOX3A6NFN3 CD99P1-204ENST00000435581 2788 ntTSL 2 BASIC14.82□□□□□ -0.04
RBFOX3A6NFN3 SLC8B1-210ENST00000550047 2493 ntTSL 2 BASIC14.82□□□□□ -0.04
RBFOX3A6NFN3 C16orf95-201ENST00000253461 953 ntAPPRIS P3 TSL 1 (best) BASIC14.82□□□□□ -0.04
RBFOX3A6NFN3 TPD52L1-202ENST00000368388 2147 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
RBFOX3A6NFN3 MIR572-201ENST00000384983 95 ntBASIC14.82□□□□□ -0.04
RBFOX3A6NFN3 NALT1-201ENST00000429224 738 ntTSL 5 BASIC14.82□□□□□ -0.04
RBFOX3A6NFN3 ZSWIM7-205ENST00000472495 703 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
RBFOX3A6NFN3 TYROBP-203ENST00000544690 522 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
RBFOX3A6NFN3 GSKIP-207ENST00000556095 3834 ntAPPRIS P1 TSL 2 BASIC14.82□□□□□ -0.04
RBFOX3A6NFN3 LINC01632-201ENST00000615763 496 ntTSL 3 BASIC14.82□□□□□ -0.04
RBFOX3A6NFN3 POLR3H-202ENST00000355209 4416 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
RBFOX3A6NFN3 NARF-204ENST00000390006 1766 ntTSL 2 BASIC14.82□□□□□ -0.04
RBFOX3A6NFN3 EXTL3-213ENST00000523149 1779 ntTSL 5 BASIC14.82□□□□□ -0.04
RBFOX3A6NFN3 AC008894.3-201ENST00000624324 3103 ntBASIC14.82□□□□□ -0.04
RBFOX3A6NFN3 RCN2-202ENST00000394883 1366 ntTSL 5 BASIC14.82□□□□□ -0.04
RBFOX3A6NFN3 ANTXR1-202ENST00000409349 1384 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
RBFOX3A6NFN3 NPRL3-201ENST00000399953 2784 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
RBFOX3A6NFN3 CACNA1G-206ENST00000416767 4899 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
RBFOX3A6NFN3 SBNO2-204ENST00000587024 4861 ntAPPRIS ALT2 TSL 2 BASIC14.82□□□□□ -0.04
RBFOX3A6NFN3 TRAF4-205ENST00000444415 1456 ntTSL 5 BASIC14.82□□□□□ -0.04
RBFOX3A6NFN3 VAV3-210ENST00000527011 4510 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
RBFOX3A6NFN3 ORAI2-202ENST00000403646 2528 ntAPPRIS P1 TSL 2 BASIC14.82□□□□□ -0.04
RBFOX3A6NFN3 SLC25A39-212ENST00000590194 1542 ntAPPRIS P3 TSL 5 BASIC14.82□□□□□ -0.04
RBFOX3A6NFN3 ACBD3-201ENST00000366812 3573 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
RBFOX3A6NFN3 ASPHD1-201ENST00000308748 1584 ntAPPRIS P2 TSL 1 (best) BASIC14.81□□□□□ -0.04
RBFOX3A6NFN3 JPH2-202ENST00000372980 4787 ntAPPRIS P1 TSL 5 BASIC14.81□□□□□ -0.04
RBFOX3A6NFN3 PODNL1-202ENST00000339560 2165 ntAPPRIS P3 TSL 1 (best) BASIC14.81□□□□□ -0.04
RBFOX3A6NFN3 SEPHS1-201ENST00000327347 3273 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
RBFOX3A6NFN3 SCYL1-202ENST00000279270 1659 ntTSL 5 BASIC14.81□□□□□ -0.04
RBFOX3A6NFN3 AC126773.2-201ENST00000562172 1682 ntTSL 3 BASIC14.81□□□□□ -0.04
RBFOX3A6NFN3 MPP2-206ENST00000518766 1896 ntTSL 2 BASIC14.81□□□□□ -0.04
RBFOX3A6NFN3 GATA6-201ENST00000269216 3770 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
RBFOX3A6NFN3 HIC1-202ENST00000399849 3156 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
RBFOX3A6NFN3 FAM207A-201ENST00000291634 927 ntAPPRIS P3 TSL 1 (best) BASIC14.81□□□□□ -0.04
RBFOX3A6NFN3 UNC93B3-201ENST00000308076 687 ntBASIC14.81□□□□□ -0.04
RBFOX3A6NFN3 TPSAB1-201ENST00000338844 1175 ntAPPRIS P2 TSL 1 (best) BASIC14.81□□□□□ -0.04
RBFOX3A6NFN3 C2orf50-202ENST00000405022 980 ntAPPRIS P1 TSL 2 BASIC14.81□□□□□ -0.04
RBFOX3A6NFN3 GRAMD4P2-201ENST00000423297 1097 ntBASIC14.81□□□□□ -0.04
RBFOX3A6NFN3 YBX1P1-201ENST00000445822 960 ntBASIC14.81□□□□□ -0.04
RBFOX3A6NFN3 WWTR1-AS1-203ENST00000495094 975 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
RBFOX3A6NFN3 TOLLIP-208ENST00000527938 549 ntTSL 4 BASIC14.81□□□□□ -0.04
RBFOX3A6NFN3 AP001972.3-201ENST00000530792 495 ntTSL 3 BASIC14.81□□□□□ -0.04
RBFOX3A6NFN3 AC008764.7-201ENST00000593779 1081 ntBASIC14.81□□□□□ -0.04
RBFOX3A6NFN3 HRH3-203ENST00000611492 900 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
RBFOX3A6NFN3 SLC2A8-202ENST00000373360 1937 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
RBFOX3A6NFN3 XKR4-203ENST00000622811 3907 ntAPPRIS P1 TSL 5 BASIC14.81□□□□□ -0.04
RBFOX3A6NFN3 LITAF-209ENST00000571688 2632 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
RBFOX3A6NFN3 LLGL2-202ENST00000375227 1374 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
RBFOX3A6NFN3 BLCAP-201ENST00000373537 2073 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
RBFOX3A6NFN3 TMEM189-UBE2V1-201ENST00000341698 2757 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
RBFOX3A6NFN3 RBCK1-202ENST00000356286 2774 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
RBFOX3A6NFN3 AMN1-201ENST00000281471 2110 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
RBFOX3A6NFN3 ADAMTSL5-201ENST00000330475 2857 ntAPPRIS P1 TSL 2 BASIC14.81□□□□□ -0.04
RBFOX3A6NFN3 ACY1-201ENST00000404366 1473 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
RBFOX3A6NFN3 ALDH3B1-204ENST00000614849 2280 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
RBFOX3A6NFN3 RGS11-202ENST00000316163 2376 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
RBFOX3A6NFN3 ATRIP-203ENST00000357105 2403 ntTSL 2 BASIC14.81□□□□□ -0.04
RBFOX3A6NFN3 AC022211.2-201ENST00000585075 2527 ntBASIC14.81□□□□□ -0.04
RBFOX3A6NFN3 AKIRIN1-202ENST00000432648 2741 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
RBFOX3A6NFN3 OR6D1P-203ENST00000641209 4860 ntBASIC14.8□□□□□ -0.04
RBFOX3A6NFN3 LRRC3-201ENST00000291592 5869 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
RBFOX3A6NFN3 NF2-202ENST00000338641 6025 ntAPPRIS P4 TSL 1 (best) BASIC14.8□□□□□ -0.04
RBFOX3A6NFN3 WT1-201ENST00000332351 3122 ntAPPRIS ALT2 TSL 1 (best) BASIC14.8□□□□□ -0.04
RBFOX3A6NFN3 WASF1-206ENST00000392588 3122 ntAPPRIS P1 TSL 5 BASIC14.8□□□□□ -0.04
RBFOX3A6NFN3 WDR13-201ENST00000218056 2124 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
RBFOX3A6NFN3 PMS1-213ENST00000441310 3225 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
RBFOX3A6NFN3 EIF4H-202ENST00000353999 2503 ntAPPRIS ALT1 TSL 1 (best) BASIC14.8□□□□□ -0.04
RBFOX3A6NFN3 DNPH1-201ENST00000230431 657 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
RBFOX3A6NFN3 HRASLS5-201ENST00000301790 1166 ntAPPRIS P3 TSL 1 (best) BASIC14.8□□□□□ -0.04
RBFOX3A6NFN3 KRTAP5-1-201ENST00000382171 942 ntAPPRIS P1 BASIC14.8□□□□□ -0.04
Retrieved 100 of 98,524 protein–RNA pairs in 35 ms