Protein–RNA interactions for Protein: A6NED2

RCCD1, RCC1 domain-containing protein 1, humanhuman

Predictions only

Length 376 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RCCD1A6NED2 BMS1P4-202ENST00000584747 1716 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
RCCD1A6NED2 ADK-202ENST00000372734 2083 ntAPPRIS ALT1 TSL 1 (best) BASIC19.96■□□□□ 0.79
RCCD1A6NED2 SH2D3C-203ENST00000373277 2750 ntAPPRIS ALT2 TSL 1 (best) BASIC19.96■□□□□ 0.79
RCCD1A6NED2 CCDC137-201ENST00000329214 2468 ntAPPRIS P2 TSL 1 (best) BASIC19.96■□□□□ 0.79
RCCD1A6NED2 NPLOC4-201ENST00000331134 4415 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
RCCD1A6NED2 ACTN4-202ENST00000390009 2102 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
RCCD1A6NED2 AC063977.6-201ENST00000600074 1763 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
RCCD1A6NED2 HNRNPD-201ENST00000313899 3033 ntAPPRIS P4 TSL 1 (best) BASIC19.96■□□□□ 0.79
RCCD1A6NED2 MEF2B-204ENST00000424583 1405 ntAPPRIS P1 TSL 5 BASIC19.96■□□□□ 0.79
RCCD1A6NED2 GAL3ST1-206ENST00000406955 1635 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
RCCD1A6NED2 DSCR9-201ENST00000454482 1644 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
RCCD1A6NED2 FZD10-201ENST00000229030 3281 ntAPPRIS P1 BASIC19.96■□□□□ 0.79
RCCD1A6NED2 PMF1-BGLAP-202ENST00000368276 852 ntTSL 3 BASIC19.96■□□□□ 0.79
RCCD1A6NED2 GCC2-AS1-202ENST00000440975 574 ntTSL 4 BASIC19.96■□□□□ 0.79
RCCD1A6NED2 ZNF529-AS1-202ENST00000475219 1033 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
RCCD1A6NED2 LRRC75A-AS1-205ENST00000475953 1201 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
RCCD1A6NED2 AC090192.1-201ENST00000517740 490 ntBASIC19.96■□□□□ 0.79
RCCD1A6NED2 AC018445.1-201ENST00000621571 568 ntTSL 4 BASIC19.96■□□□□ 0.79
RCCD1A6NED2 MTFP1-206ENST00000629597 482 ntTSL 5 BASIC19.96■□□□□ 0.79
RCCD1A6NED2 ABCC5-204ENST00000392579 1848 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
RCCD1A6NED2 MTSS1L-201ENST00000338779 4992 ntAPPRIS P2 TSL 1 (best) BASIC19.96■□□□□ 0.79
RCCD1A6NED2 TEX264-204ENST00000415259 2290 ntAPPRIS P3 TSL 5 BASIC19.96■□□□□ 0.79
RCCD1A6NED2 NEXN-AS1-201ENST00000421331 2292 ntTSL 2 BASIC19.96■□□□□ 0.79
RCCD1A6NED2 ZNF274-202ENST00000345813 2678 ntAPPRIS ALT2 TSL 1 (best) BASIC19.96■□□□□ 0.79
RCCD1A6NED2 EML3-212ENST00000494176 2901 ntTSL 2 BASIC19.96■□□□□ 0.79
RCCD1A6NED2 EML3-216ENST00000529309 2909 ntTSL 2 BASIC19.96■□□□□ 0.79
RCCD1A6NED2 ACAA1-209ENST00000450296 1570 ntTSL 5 BASIC19.95■□□□□ 0.78
RCCD1A6NED2 FNBP1-201ENST00000355681 1977 ntTSL 2 BASIC19.95■□□□□ 0.78
RCCD1A6NED2 INPP4A-201ENST00000074304 6752 ntTSL 5 BASIC19.95■□□□□ 0.78
RCCD1A6NED2 RETREG1-201ENST00000306320 3268 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
RCCD1A6NED2 COL4A3BP-201ENST00000261415 2262 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
RCCD1A6NED2 BICRA-204ENST00000614245 5697 ntAPPRIS ALT2 TSL 5 BASIC19.95■□□□□ 0.78
RCCD1A6NED2 AMDHD2-201ENST00000293971 1459 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
RCCD1A6NED2 C19orf66-209ENST00000591813 1481 ntAPPRIS ALT2 TSL 1 (best) BASIC19.95■□□□□ 0.78
RCCD1A6NED2 AKR1A1-201ENST00000351829 1166 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
RCCD1A6NED2 ROPN1L-202ENST00000503804 1291 ntAPPRIS P1 TSL 2 BASIC19.95■□□□□ 0.78
RCCD1A6NED2 GLRB-205ENST00000512619 728 ntTSL 3 BASIC19.95■□□□□ 0.78
RCCD1A6NED2 ARF3-208ENST00000541959 807 ntAPPRIS P1 TSL 5 BASIC19.95■□□□□ 0.78
RCCD1A6NED2 PNMA8A-203ENST00000602246 572 ntAPPRIS ALT2 TSL 4 BASIC19.95■□□□□ 0.78
RCCD1A6NED2 AC004264.1-201ENST00000608354 794 ntBASIC19.95■□□□□ 0.78
RCCD1A6NED2 PHB2-203ENST00000535923 1515 ntAPPRIS P2 TSL 5 BASIC19.95■□□□□ 0.78
RCCD1A6NED2 TNFRSF1A-213ENST00000540022 1527 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
RCCD1A6NED2 ITPKB-203ENST00000429204 6162 ntAPPRIS P1 TSL 5 BASIC19.95■□□□□ 0.78
RCCD1A6NED2 QPCTL-202ENST00000366382 1814 ntTSL 2 BASIC19.95■□□□□ 0.78
RCCD1A6NED2 EDA-208ENST00000524573 1381 ntAPPRIS ALT1 TSL 1 (best) BASIC19.95■□□□□ 0.78
RCCD1A6NED2 GRIN3B-201ENST00000234389 3281 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
RCCD1A6NED2 RIC8A-208ENST00000527696 2565 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
RCCD1A6NED2 FMR1-206ENST00000370477 3437 ntTSL 5 BASIC19.94■□□□□ 0.78
RCCD1A6NED2 TRIM15-207ENST00000376694 2214 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
RCCD1A6NED2 PYGL-201ENST00000216392 3048 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
RCCD1A6NED2 RASSF1-201ENST00000327761 1757 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
RCCD1A6NED2 USP48-204ENST00000400301 4309 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
RCCD1A6NED2 C7orf50-201ENST00000357429 1294 ntAPPRIS P2 TSL 1 (best) BASIC19.94■□□□□ 0.78
RCCD1A6NED2 ASH1L-AS1-202ENST00000456633 911 ntTSL 2 BASIC19.94■□□□□ 0.78
RCCD1A6NED2 AC226101.2-201ENST00000458252 747 ntTSL 2 BASIC19.94■□□□□ 0.78
RCCD1A6NED2 LCN6-203ENST00000476567 1015 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
RCCD1A6NED2 AC022211.2-202ENST00000582668 546 ntTSL 4 BASIC19.94■□□□□ 0.78
RCCD1A6NED2 C17orf50-201ENST00000603305 569 ntTSL 3 BASIC19.94■□□□□ 0.78
RCCD1A6NED2 C17orf50-203ENST00000605587 1018 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
RCCD1A6NED2 MAGIX-206ENST00000615626 1057 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
RCCD1A6NED2 FBXL5-202ENST00000412094 2837 ntAPPRIS ALT1 TSL 1 (best) BASIC19.94■□□□□ 0.78
RCCD1A6NED2 TADA3-202ENST00000343450 2554 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
RCCD1A6NED2 CLN3-206ENST00000360019 1840 ntTSL 2 BASIC19.94■□□□□ 0.78
RCCD1A6NED2 LEMD2-214ENST00000614475 2883 ntAPPRIS P1 TSL 5 BASIC19.94■□□□□ 0.78
RCCD1A6NED2 SDC2-202ENST00000518385 1583 ntTSL 5 BASIC19.94■□□□□ 0.78
RCCD1A6NED2 DDX31-206ENST00000480876 1333 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
RCCD1A6NED2 FGFR1-214ENST00000447712 5900 ntAPPRIS P3 TSL 1 (best) BASIC19.94■□□□□ 0.78
RCCD1A6NED2 ANKRD6-204ENST00000447838 2968 ntAPPRIS P3 TSL 1 (best) BASIC19.94■□□□□ 0.78
RCCD1A6NED2 PNMA6E-201ENST00000445091 2192 ntAPPRIS P1 TSL 2 BASIC19.94■□□□□ 0.78
RCCD1A6NED2 CSF1-203ENST00000369801 1364 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
RCCD1A6NED2 LINC00535-201ENST00000501400 1914 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
RCCD1A6NED2 SEMA6C-210ENST00000621728 1918 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
RCCD1A6NED2 AC134043.2-201ENST00000624206 2238 ntBASIC19.94■□□□□ 0.78
RCCD1A6NED2 CXXC4-201ENST00000394767 5565 ntAPPRIS P1 TSL 5 BASIC19.94■□□□□ 0.78
RCCD1A6NED2 LYPD3-201ENST00000244333 1694 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
RCCD1A6NED2 KRT8P3-201ENST00000519669 1449 ntBASIC19.93■□□□□ 0.78
RCCD1A6NED2 LINC00466-207ENST00000634725 1736 ntTSL 5 BASIC19.93■□□□□ 0.78
RCCD1A6NED2 PRODH-205ENST00000420436 2034 ntAPPRIS ALT2 TSL 2 BASIC19.93■□□□□ 0.78
RCCD1A6NED2 ARMC10-209ENST00000454559 2347 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
RCCD1A6NED2 CORO6-210ENST00000580212 2345 ntTSL 5 BASIC19.93■□□□□ 0.78
RCCD1A6NED2 KRT81-202ENST00000615839 1505 ntAPPRIS ALT2 TSL 5 BASIC19.93■□□□□ 0.78
RCCD1A6NED2 SEPT2-245ENST00000616972 3446 ntTSL 2 BASIC19.93■□□□□ 0.78
RCCD1A6NED2 NRXN2-201ENST00000265459 6621 ntAPPRIS P3 TSL 5 BASIC19.93■□□□□ 0.78
RCCD1A6NED2 ZNF133-211ENST00000538547 2245 ntTSL 2 BASIC19.93■□□□□ 0.78
RCCD1A6NED2 COX7A2L-201ENST00000234301 1112 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
RCCD1A6NED2 KRTCAP3-201ENST00000288873 872 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
RCCD1A6NED2 RTL8A-201ENST00000370775 1244 ntAPPRIS P1 BASIC19.93■□□□□ 0.78
RCCD1A6NED2 METTL21A-204ENST00000425132 869 ntTSL 2 BASIC19.93■□□□□ 0.78
RCCD1A6NED2 Z98884.1-201ENST00000451646 830 ntTSL 3 BASIC19.93■□□□□ 0.78
RCCD1A6NED2 MFSD4A-206ENST00000489709 1136 ntTSL 5 BASIC19.93■□□□□ 0.78
RCCD1A6NED2 TP53I11-215ENST00000531928 1078 ntTSL 3 BASIC19.93■□□□□ 0.78
RCCD1A6NED2 AC073912.1-201ENST00000546264 587 ntTSL 3 BASIC19.93■□□□□ 0.78
RCCD1A6NED2 CDIPT-204ENST00000563415 1047 ntTSL 3 BASIC19.93■□□□□ 0.78
RCCD1A6NED2 AC069544.1-201ENST00000609399 999 ntBASIC19.93■□□□□ 0.78
RCCD1A6NED2 REST-211ENST00000640168 1268 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
RCCD1A6NED2 MFSD11-220ENST00000621483 2850 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
RCCD1A6NED2 GJA4-201ENST00000342280 1622 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
RCCD1A6NED2 MARK2-203ENST00000377810 4560 ntAPPRIS ALT2 TSL 5 BASIC19.93■□□□□ 0.78
RCCD1A6NED2 GAB1-201ENST00000262994 2648 ntAPPRIS ALT1 TSL 1 (best) BASIC19.93■□□□□ 0.78
RCCD1A6NED2 PNKP-207ENST00000596014 1665 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Retrieved 100 of 98,524 protein–RNA pairs in 32.1 ms