Protein–RNA interactions for Protein: A0A1B0GX49

TRBV6-4, T-cell receptor beta variable 6-4 (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV6-4A0A1B0GX49 KRT81-202ENST00000615839 1505 ntAPPRIS ALT2 TSL 5 BASIC13.26□□□□□ -0.29
TRBV6-4A0A1B0GX49 IFNL4-203ENST00000634680 1421 ntAPPRIS ALT2 TSL 1 (best) BASIC13.26□□□□□ -0.29
TRBV6-4A0A1B0GX49 EXTL3-201ENST00000220562 6483 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
TRBV6-4A0A1B0GX49 FKRP-202ENST00000391909 2801 ntAPPRIS P1 TSL 2 BASIC13.26□□□□□ -0.29
TRBV6-4A0A1B0GX49 RAX2-201ENST00000555633 2414 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
TRBV6-4A0A1B0GX49 SHISA5-220ENST00000619810 2385 ntTSL 2 BASIC13.25□□□□□ -0.29
TRBV6-4A0A1B0GX49 GLCCI1-201ENST00000223145 4743 ntAPPRIS P2 TSL 1 (best) BASIC13.25□□□□□ -0.29
TRBV6-4A0A1B0GX49 RTEL1-204ENST00000370003 2273 ntTSL 2 BASIC13.25□□□□□ -0.29
TRBV6-4A0A1B0GX49 TFAP4-201ENST00000204517 2215 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
TRBV6-4A0A1B0GX49 PLEKHA2-206ENST00000521746 2127 ntTSL 5 BASIC13.25□□□□□ -0.29
TRBV6-4A0A1B0GX49 NUMBL-202ENST00000540131 1931 ntAPPRIS ALT2 TSL 2 BASIC13.25□□□□□ -0.29
TRBV6-4A0A1B0GX49 NF2-203ENST00000353887 1845 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
TRBV6-4A0A1B0GX49 KCNH1-210ENST00000640044 1818 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
TRBV6-4A0A1B0GX49 GJA4-201ENST00000342280 1622 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
TRBV6-4A0A1B0GX49 SIGIRR-202ENST00000397632 1598 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
TRBV6-4A0A1B0GX49 DISP3-202ENST00000304391 1495 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
TRBV6-4A0A1B0GX49 C19orf25-201ENST00000427685 1410 ntTSL 2 BASIC13.25□□□□□ -0.29
TRBV6-4A0A1B0GX49 PHKA2-201ENST00000379942 5559 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
TRBV6-4A0A1B0GX49 ARHGAP26-201ENST00000274498 6862 ntAPPRIS P3 TSL 1 (best) BASIC13.25□□□□□ -0.29
TRBV6-4A0A1B0GX49 NPAS1-201ENST00000439365 1341 ntTSL 2 BASIC13.25□□□□□ -0.29
TRBV6-4A0A1B0GX49 TMEM191C-214ENST00000621561 1337 ntAPPRIS P2 TSL 5 BASIC13.25□□□□□ -0.29
TRBV6-4A0A1B0GX49 RNF146-201ENST00000309649 2624 ntAPPRIS P3 TSL 4 BASIC13.25□□□□□ -0.29
TRBV6-4A0A1B0GX49 PHOSPHO2-201ENST00000359744 1125 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
TRBV6-4A0A1B0GX49 RPS2P55-201ENST00000397318 883 ntBASIC13.25□□□□□ -0.29
TRBV6-4A0A1B0GX49 AP000697.1-201ENST00000430607 339 ntTSL 5 BASIC13.25□□□□□ -0.29
TRBV6-4A0A1B0GX49 ASPHD1-203ENST00000483405 1115 ntAPPRIS ALT2 TSL 3 BASIC13.25□□□□□ -0.29
TRBV6-4A0A1B0GX49 AC107956.1-201ENST00000494359 873 ntBASIC13.25□□□□□ -0.29
TRBV6-4A0A1B0GX49 AP002433.1-201ENST00000525548 964 ntTSL 3 BASIC13.25□□□□□ -0.29
TRBV6-4A0A1B0GX49 AF131216.3-201ENST00000525867 1099 ntTSL 2 BASIC13.25□□□□□ -0.29
TRBV6-4A0A1B0GX49 TMEM263-203ENST00000547242 811 ntAPPRIS P1 TSL 2 BASIC13.25□□□□□ -0.29
TRBV6-4A0A1B0GX49 AC100835.1-201ENST00000565737 498 ntTSL 5 BASIC13.25□□□□□ -0.29
TRBV6-4A0A1B0GX49 PNMA8A-203ENST00000602246 572 ntAPPRIS ALT2 TSL 4 BASIC13.25□□□□□ -0.29
TRBV6-4A0A1B0GX49 LARGE2-206ENST00000529052 2459 ntAPPRIS ALT2 TSL 2 BASIC13.25□□□□□ -0.29
TRBV6-4A0A1B0GX49 KRT15-203ENST00000393976 2394 ntAPPRIS P1 TSL 5 BASIC13.25□□□□□ -0.29
TRBV6-4A0A1B0GX49 AP1AR-202ENST00000309703 2337 ntAPPRIS ALT1 TSL 1 (best) BASIC13.25□□□□□ -0.29
TRBV6-4A0A1B0GX49 BICRA-201ENST00000396720 5739 ntAPPRIS P2 TSL 5 BASIC13.25□□□□□ -0.29
TRBV6-4A0A1B0GX49 ZBTB48-202ENST00000377674 2293 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
TRBV6-4A0A1B0GX49 CYR61-201ENST00000451137 2290 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
TRBV6-4A0A1B0GX49 SEPT2-203ENST00000391971 3315 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
TRBV6-4A0A1B0GX49 SNAI3-AS1-205ENST00000568633 2096 ntBASIC13.25□□□□□ -0.29
TRBV6-4A0A1B0GX49 PPFIA1-202ENST00000389547 4133 ntAPPRIS ALT1 TSL 1 (best) BASIC13.25□□□□□ -0.29
TRBV6-4A0A1B0GX49 CNTNAP3-204ENST00000377656 4986 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
TRBV6-4A0A1B0GX49 SAMD11-216ENST00000620200 1874 ntTSL 5 BASIC13.25□□□□□ -0.29
TRBV6-4A0A1B0GX49 NFYC-AS1-201ENST00000606277 1687 ntBASIC13.24□□□□□ -0.29
TRBV6-4A0A1B0GX49 SLC22A17-204ENST00000397267 2455 ntAPPRIS P4 TSL 5 BASIC13.24□□□□□ -0.29
TRBV6-4A0A1B0GX49 MINOS1-NBL1-204ENST00000602662 1623 ntAPPRIS P1 TSL 2 BASIC13.24□□□□□ -0.29
TRBV6-4A0A1B0GX49 PRMT5-204ENST00000397441 2418 ntTSL 2 BASIC13.24□□□□□ -0.29
TRBV6-4A0A1B0GX49 TMEM155-201ENST00000337677 2313 ntAPPRIS P2 TSL 1 (best) BASIC13.24□□□□□ -0.29
TRBV6-4A0A1B0GX49 PPP1R18-201ENST00000274853 4599 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
TRBV6-4A0A1B0GX49 PER3-203ENST00000377541 1524 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
TRBV6-4A0A1B0GX49 PPP1R18-205ENST00000615527 4597 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
TRBV6-4A0A1B0GX49 PHF2-202ENST00000375376 3045 ntTSL 5 BASIC13.24□□□□□ -0.29
TRBV6-4A0A1B0GX49 MAPKAPK2-202ENST00000367103 2961 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
TRBV6-4A0A1B0GX49 ETV2-203ENST00000402764 1487 ntAPPRIS P3 TSL 1 (best) BASIC13.24□□□□□ -0.29
TRBV6-4A0A1B0GX49 PRR14-202ENST00000300835 2198 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
TRBV6-4A0A1B0GX49 MTDH-203ENST00000519934 2184 ntTSL 5 BASIC13.24□□□□□ -0.29
TRBV6-4A0A1B0GX49 KRT17-205ENST00000540235 1438 ntTSL 5 BASIC13.24□□□□□ -0.29
TRBV6-4A0A1B0GX49 AC138028.1-201ENST00000333666 2137 ntTSL 2 BASIC13.24□□□□□ -0.29
TRBV6-4A0A1B0GX49 CRYBB2P1-202ENST00000382734 1364 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
TRBV6-4A0A1B0GX49 AC096733.2-201ENST00000609937 1394 ntBASIC13.24□□□□□ -0.29
TRBV6-4A0A1B0GX49 BLOC1S3-201ENST00000433642 2601 ntAPPRIS P1 TSL 2 BASIC13.24□□□□□ -0.29
TRBV6-4A0A1B0GX49 AC018755.2-202ENST00000429354 1926 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
TRBV6-4A0A1B0GX49 C1QBP-201ENST00000225698 1169 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
TRBV6-4A0A1B0GX49 GAMT-201ENST00000252288 1121 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
TRBV6-4A0A1B0GX49 MDK-201ENST00000359803 985 ntAPPRIS P2 TSL 2 BASIC13.24□□□□□ -0.29
TRBV6-4A0A1B0GX49 C9orf129-201ENST00000375419 1154 ntAPPRIS P1 TSL 5 BASIC13.24□□□□□ -0.29
TRBV6-4A0A1B0GX49 GPR35-203ENST00000407714 1258 ntAPPRIS P3 TSL 1 (best) BASIC13.24□□□□□ -0.29
TRBV6-4A0A1B0GX49 GCSHP5-201ENST00000443090 522 ntBASIC13.24□□□□□ -0.29
TRBV6-4A0A1B0GX49 AL158047.1-201ENST00000445918 881 ntBASIC13.24□□□□□ -0.29
TRBV6-4A0A1B0GX49 AC008040.2-201ENST00000461049 708 ntBASIC13.24□□□□□ -0.29
TRBV6-4A0A1B0GX49 AC116562.2-201ENST00000507042 360 ntBASIC13.24□□□□□ -0.29
TRBV6-4A0A1B0GX49 NUDT16P1-203ENST00000513809 620 ntBASIC13.24□□□□□ -0.29
TRBV6-4A0A1B0GX49 FAM86C2P-201ENST00000525180 435 ntTSL 4 BASIC13.24□□□□□ -0.29
TRBV6-4A0A1B0GX49 IGHMBP2-205ENST00000539224 785 ntTSL 3 BASIC13.24□□□□□ -0.29
TRBV6-4A0A1B0GX49 AP005263.1-201ENST00000579126 914 ntTSL 2 BASIC13.24□□□□□ -0.29
TRBV6-4A0A1B0GX49 AC233702.5-201ENST00000584107 538 ntBASIC13.24□□□□□ -0.29
TRBV6-4A0A1B0GX49 TSTD3-202ENST00000636394 336 ntAPPRIS ALT2 TSL 3 BASIC13.24□□□□□ -0.29
TRBV6-4A0A1B0GX49 TYRO3-201ENST00000263798 8207 ntAPPRIS P3 TSL 1 (best) BASIC13.24□□□□□ -0.29
TRBV6-4A0A1B0GX49 AC096719.1-201ENST00000510705 1874 ntTSL 5 BASIC13.24□□□□□ -0.29
TRBV6-4A0A1B0GX49 EI24-201ENST00000278903 2455 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
TRBV6-4A0A1B0GX49 AC073592.3-201ENST00000625118 1834 ntBASIC13.24□□□□□ -0.29
TRBV6-4A0A1B0GX49 ATP2A3-201ENST00000309890 4826 ntTSL 5 BASIC13.24□□□□□ -0.29
TRBV6-4A0A1B0GX49 FRRS1L-201ENST00000561981 8197 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
TRBV6-4A0A1B0GX49 DAG1-222ENST00000545947 5829 ntAPPRIS P1 TSL 5 BASIC13.24□□□□□ -0.29
TRBV6-4A0A1B0GX49 NCAN-201ENST00000252575 6387 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
TRBV6-4A0A1B0GX49 LTBP3-202ENST00000322147 4046 ntAPPRIS P3 TSL 1 (best) BASIC13.24□□□□□ -0.29
TRBV6-4A0A1B0GX49 OGG1-203ENST00000302036 2220 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
TRBV6-4A0A1B0GX49 ANKRD13D-201ENST00000308440 2219 ntTSL 2 BASIC13.24□□□□□ -0.29
TRBV6-4A0A1B0GX49 HAUS4-218ENST00000555986 1626 ntTSL 5 BASIC13.24□□□□□ -0.29
TRBV6-4A0A1B0GX49 IMMP2L-202ENST00000405709 1522 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
TRBV6-4A0A1B0GX49 MTMR9LP-203ENST00000426597 1545 ntBASIC13.23□□□□□ -0.29
TRBV6-4A0A1B0GX49 PLIN5-201ENST00000381848 2470 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
TRBV6-4A0A1B0GX49 RTN4-207ENST00000402434 1456 ntTSL 5 BASIC13.23□□□□□ -0.29
TRBV6-4A0A1B0GX49 MSLN-207ENST00000566549 2418 ntAPPRIS ALT2 TSL 1 (best) BASIC13.23□□□□□ -0.29
TRBV6-4A0A1B0GX49 PRPF39-201ENST00000355765 2868 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
TRBV6-4A0A1B0GX49 SH3BP1-201ENST00000357436 2852 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
TRBV6-4A0A1B0GX49 SNAP47-201ENST00000315781 2367 ntAPPRIS P3 TSL 1 (best) BASIC13.23□□□□□ -0.29
TRBV6-4A0A1B0GX49 AC112777.1-201ENST00000540175 1423 ntBASIC13.23□□□□□ -0.29
TRBV6-4A0A1B0GX49 TBX20-201ENST00000408931 1871 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
TRBV6-4A0A1B0GX49 PCCB-208ENST00000468777 1877 ntAPPRIS ALT2 TSL 3 BASIC13.23□□□□□ -0.29
Retrieved 100 of 98,524 protein–RNA pairs in 23.7 ms