Protein–RNA interactions for Protein: A0A075B6N4

TRBV25-1, T-cell receptor beta variable 25-1 (Fragment), humanhuman

Predictions only

Length 114 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV25-1A0A075B6N4 RAB34-203ENST00000395243 1597 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
TRBV25-1A0A075B6N4 CCDC177-201ENST00000599174 4131 ntAPPRIS P1 TSL 3 BASIC13.54□□□□□ -0.24
TRBV25-1A0A075B6N4 FBF1-205ENST00000586717 4825 ntAPPRIS ALT2 TSL 5 BASIC13.53□□□□□ -0.24
TRBV25-1A0A075B6N4 TRPV4-208ENST00000544971 2295 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
TRBV25-1A0A075B6N4 GALNT16-204ENST00000553669 1629 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
TRBV25-1A0A075B6N4 CORO1A-216ENST00000570045 1622 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
TRBV25-1A0A075B6N4 SLC6A9-202ENST00000360584 2330 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
TRBV25-1A0A075B6N4 ROCK2-209ENST00000616279 6401 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
TRBV25-1A0A075B6N4 TMEM91-209ENST00000539627 1843 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
TRBV25-1A0A075B6N4 SMARCC2-201ENST00000267064 4076 ntAPPRIS P4 TSL 1 (best) BASIC13.53□□□□□ -0.24
TRBV25-1A0A075B6N4 CEP78-204ENST00000415759 2623 ntAPPRIS ALT2 TSL 5 BASIC13.53□□□□□ -0.24
TRBV25-1A0A075B6N4 AP001351.1-201ENST00000501397 1865 ntTSL 2 BASIC13.53□□□□□ -0.24
TRBV25-1A0A075B6N4 C2CD3-213ENST00000539061 2722 ntTSL 2 BASIC13.53□□□□□ -0.24
TRBV25-1A0A075B6N4 NADSYN1-201ENST00000319023 2773 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
TRBV25-1A0A075B6N4 BIRC8-201ENST00000426466 2026 ntAPPRIS P1 BASIC13.53□□□□□ -0.24
TRBV25-1A0A075B6N4 SLC16A3-221ENST00000617373 2048 ntAPPRIS P1 TSL 5 BASIC13.53□□□□□ -0.24
TRBV25-1A0A075B6N4 MLNR-201ENST00000218721 1239 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
TRBV25-1A0A075B6N4 C16orf74-201ENST00000284245 906 ntAPPRIS P2 TSL 1 (best) BASIC13.53□□□□□ -0.24
TRBV25-1A0A075B6N4 SMNDC1-201ENST00000369592 1110 ntAPPRIS P1 TSL 3 BASIC13.53□□□□□ -0.24
TRBV25-1A0A075B6N4 DUSP5P2-201ENST00000426873 1033 ntBASIC13.53□□□□□ -0.24
TRBV25-1A0A075B6N4 ABHD14A-202ENST00000458031 1113 ntTSL 5 BASIC13.53□□□□□ -0.24
TRBV25-1A0A075B6N4 OR2A1-AS1-201ENST00000462305 773 ntBASIC13.53□□□□□ -0.24
TRBV25-1A0A075B6N4 AC004889.1-204ENST00000474656 773 ntTSL 3 BASIC13.53□□□□□ -0.24
TRBV25-1A0A075B6N4 LINC01962-201ENST00000513771 411 ntTSL 2 BASIC13.53□□□□□ -0.24
TRBV25-1A0A075B6N4 TXNRD3-203ENST00000524230 2950 ntAPPRIS ALT2 TSL 1 (best) BASIC13.53□□□□□ -0.24
TRBV25-1A0A075B6N4 GOSR2-208ENST00000573224 1115 ntTSL 5 BASIC13.53□□□□□ -0.24
TRBV25-1A0A075B6N4 CIRBP-214ENST00000587896 1081 ntTSL 2 BASIC13.53□□□□□ -0.24
TRBV25-1A0A075B6N4 AL121832.2-201ENST00000610979 668 ntBASIC13.53□□□□□ -0.24
TRBV25-1A0A075B6N4 AL121906.2-201ENST00000621597 723 ntBASIC13.53□□□□□ -0.24
TRBV25-1A0A075B6N4 TRIL-201ENST00000539664 4935 ntAPPRIS P1 BASIC13.53□□□□□ -0.24
TRBV25-1A0A075B6N4 IFRD2-204ENST00000436390 2275 ntAPPRIS P1 TSL 2 BASIC13.53□□□□□ -0.24
TRBV25-1A0A075B6N4 TRMU-202ENST00000381019 1381 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
TRBV25-1A0A075B6N4 SOST-201ENST00000301691 2300 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
TRBV25-1A0A075B6N4 GGNBP2-210ENST00000611219 2315 ntTSL 2 BASIC13.53□□□□□ -0.24
TRBV25-1A0A075B6N4 TM7SF2-202ENST00000345348 1490 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
TRBV25-1A0A075B6N4 TLE2-219ENST00000591529 2483 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
TRBV25-1A0A075B6N4 CEP83-AS1-201ENST00000623122 2482 ntBASIC13.53□□□□□ -0.24
TRBV25-1A0A075B6N4 APOLD1-202ENST00000356591 4646 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
TRBV25-1A0A075B6N4 TIMM50-202ENST00000544017 2572 ntAPPRIS P2 TSL 1 (best) BASIC13.53□□□□□ -0.24
TRBV25-1A0A075B6N4 SNX7-205ENST00000529992 1589 ntTSL 2 BASIC13.53□□□□□ -0.24
TRBV25-1A0A075B6N4 KRT14-201ENST00000167586 1662 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
TRBV25-1A0A075B6N4 SCUBE2-202ENST00000450649 2912 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
TRBV25-1A0A075B6N4 ACVR1B-205ENST00000541224 1791 ntTSL 2 BASIC13.53□□□□□ -0.24
TRBV25-1A0A075B6N4 CRAMP1-202ENST00000397412 7772 ntAPPRIS P1 TSL 5 BASIC13.53□□□□□ -0.24
TRBV25-1A0A075B6N4 EFCAB11-202ENST00000538485 1870 ntTSL 2 BASIC13.53□□□□□ -0.24
TRBV25-1A0A075B6N4 EEF1A1-203ENST00000331523 1923 ntAPPRIS P1 TSL 5 BASIC13.52□□□□□ -0.24
TRBV25-1A0A075B6N4 CYP2E1-205ENST00000463117 1912 ntAPPRIS P1 TSL 5 BASIC13.52□□□□□ -0.24
TRBV25-1A0A075B6N4 HOXA9-201ENST00000343483 2060 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
TRBV25-1A0A075B6N4 GGT6-202ENST00000381550 2145 ntTSL 2 BASIC13.52□□□□□ -0.24
TRBV25-1A0A075B6N4 IL17RC-206ENST00000416074 2342 ntAPPRIS ALT2 TSL 1 (best) BASIC13.52□□□□□ -0.24
TRBV25-1A0A075B6N4 LZTS3-203ENST00000360342 4055 ntTSL 1 (best) BASIC13.52□□□□□ -0.24
TRBV25-1A0A075B6N4 UNC13A-205ENST00000551649 6052 ntAPPRIS ALT2 TSL 5 BASIC13.52□□□□□ -0.24
TRBV25-1A0A075B6N4 EWSR1-206ENST00000397938 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC13.52□□□□□ -0.24
TRBV25-1A0A075B6N4 MDGA1-203ENST00000434837 10736 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
TRBV25-1A0A075B6N4 PRR18-201ENST00000322583 3084 ntAPPRIS P2 BASIC13.52□□□□□ -0.24
TRBV25-1A0A075B6N4 INPP4A-205ENST00000409851 3365 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
TRBV25-1A0A075B6N4 DCAF17-211ENST00000539783 5623 ntAPPRIS ALT2 TSL 5 BASIC13.52□□□□□ -0.25
TRBV25-1A0A075B6N4 CHCHD10-201ENST00000401675 691 ntAPPRIS P1 TSL 5 BASIC13.52□□□□□ -0.25
TRBV25-1A0A075B6N4 WIPF1-207ENST00000410117 777 ntTSL 3 BASIC13.52□□□□□ -0.25
TRBV25-1A0A075B6N4 MIPEPP3-201ENST00000412105 444 ntBASIC13.52□□□□□ -0.25
TRBV25-1A0A075B6N4 OTUB1-203ENST00000428192 1296 ntAPPRIS P2 TSL 2 BASIC13.52□□□□□ -0.25
TRBV25-1A0A075B6N4 AL645608.9-201ENST00000442292 829 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
TRBV25-1A0A075B6N4 ANKRD65-202ENST00000442470 876 ntTSL 2 BASIC13.52□□□□□ -0.25
TRBV25-1A0A075B6N4 AC006252.1-201ENST00000483834 1101 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
TRBV25-1A0A075B6N4 CTBP1-AS2-203ENST00000507044 739 ntTSL 3 BASIC13.52□□□□□ -0.25
TRBV25-1A0A075B6N4 TPD52L1-207ENST00000527711 999 ntTSL 2 BASIC13.52□□□□□ -0.25
TRBV25-1A0A075B6N4 VPS53-216ENST00000574029 585 ntTSL 4 BASIC13.52□□□□□ -0.25
TRBV25-1A0A075B6N4 CD99-210ENST00000611428 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC13.52□□□□□ -0.25
TRBV25-1A0A075B6N4 AL050303.2-201ENST00000619798 666 ntBASIC13.52□□□□□ -0.25
TRBV25-1A0A075B6N4 MARS-234ENST00000630571 216 ntTSL 5 BASIC13.52□□□□□ -0.25
TRBV25-1A0A075B6N4 MARS-235ENST00000630803 183 ntTSL 3 BASIC13.52□□□□□ -0.25
TRBV25-1A0A075B6N4 MTAP-204ENST00000460874 1434 ntTSL 2 BASIC13.52□□□□□ -0.25
TRBV25-1A0A075B6N4 NEO1-202ENST00000339362 7342 ntAPPRIS P3 TSL 5 BASIC13.52□□□□□ -0.25
TRBV25-1A0A075B6N4 SARDH-201ENST00000298628 1484 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
TRBV25-1A0A075B6N4 GCOM1-201ENST00000380568 1516 ntAPPRIS ALT2 TSL 2 BASIC13.52□□□□□ -0.25
TRBV25-1A0A075B6N4 BSCL2-207ENST00000407022 1516 ntAPPRIS P3 TSL 1 (best) BASIC13.52□□□□□ -0.25
TRBV25-1A0A075B6N4 ALKBH6-213ENST00000486389 1525 ntTSL 3 BASIC13.52□□□□□ -0.25
TRBV25-1A0A075B6N4 AC093525.10-201ENST00000625130 1569 ntBASIC13.52□□□□□ -0.25
TRBV25-1A0A075B6N4 CFAP77-203ENST00000393216 1638 ntAPPRIS ALT2 TSL 1 (best) BASIC13.52□□□□□ -0.25
TRBV25-1A0A075B6N4 MELTF-202ENST00000296351 1650 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
TRBV25-1A0A075B6N4 SLC22A1-202ENST00000366963 1948 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
TRBV25-1A0A075B6N4 ITSN2-201ENST00000355123 6300 ntAPPRIS P4 TSL 1 (best) BASIC13.52□□□□□ -0.25
TRBV25-1A0A075B6N4 ENTPD8-202ENST00000371506 2222 ntAPPRIS P1 TSL 5 BASIC13.52□□□□□ -0.25
TRBV25-1A0A075B6N4 TRIM47-201ENST00000254816 2266 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
TRBV25-1A0A075B6N4 PPAN-P2RY11-201ENST00000393796 2385 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
TRBV25-1A0A075B6N4 ZNF84-201ENST00000327668 7162 ntAPPRIS P2 TSL 1 (best) BASIC13.52□□□□□ -0.25
TRBV25-1A0A075B6N4 CHRAC1-201ENST00000220913 2488 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
TRBV25-1A0A075B6N4 ARPC4-201ENST00000397261 2582 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
TRBV25-1A0A075B6N4 PANX1-202ENST00000436171 2750 ntAPPRIS ALT1 TSL 1 (best) BASIC13.52□□□□□ -0.25
TRBV25-1A0A075B6N4 RNF187-201ENST00000305943 3017 ntAPPRIS ALT2 TSL 1 (best) BASIC13.52□□□□□ -0.25
TRBV25-1A0A075B6N4 TTLL12-201ENST00000216129 3385 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
TRBV25-1A0A075B6N4 PITPNA-202ENST00000539476 3612 ntAPPRIS ALT1 TSL 5 BASIC13.52□□□□□ -0.25
TRBV25-1A0A075B6N4 ATXN2-201ENST00000377617 4702 ntAPPRIS P3 TSL 1 (best) BASIC13.52□□□□□ -0.25
TRBV25-1A0A075B6N4 NFATC4-231ENST00000557451 5613 ntAPPRIS ALT2 TSL 1 (best) BASIC13.51□□□□□ -0.25
TRBV25-1A0A075B6N4 AP5B1-201ENST00000532090 4811 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
TRBV25-1A0A075B6N4 TBC1D20-201ENST00000354200 4466 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
TRBV25-1A0A075B6N4 NOMO1-208ENST00000620755 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC13.51□□□□□ -0.25
TRBV25-1A0A075B6N4 CDK16-223ENST00000622098 2968 ntTSL 2 BASIC13.51□□□□□ -0.25
TRBV25-1A0A075B6N4 FARP2-202ENST00000373287 2580 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
TRBV25-1A0A075B6N4 MTMR14-203ENST00000353332 2368 ntAPPRIS ALT2 TSL 1 (best) BASIC13.51□□□□□ -0.25
Retrieved 100 of 98,524 protein–RNA pairs in 41.3 ms