Protein–RNA interactions for Protein: Q99990

VGLL1, Transcription cofactor vestigial-like protein 1, humanhuman

Predictions only

Length 258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VGLL1Q99990 RASSF5-204ENST00000580449 1932 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
VGLL1Q99990 SMDT1-201ENST00000331479 1567 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
VGLL1Q99990 RAD21-AS1-201ENST00000521487 2010 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
VGLL1Q99990 BCL7C-202ENST00000380317 2409 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
VGLL1Q99990 ECI1-203ENST00000562238 948 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
VGLL1Q99990 FAM189B-210ENST00000621094 1335 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
VGLL1Q99990 HIST2H3C-201ENST00000369158 1656 ntAPPRIS P1 BASIC18.92■□□□□ 0.62
VGLL1Q99990 HIST2H3A-201ENST00000403683 1656 ntAPPRIS P1 BASIC18.92■□□□□ 0.62
VGLL1Q99990 AC018358.1-201ENST00000631079 1402 ntBASIC18.91■□□□□ 0.62
VGLL1Q99990 BBC3-204ENST00000449228 1827 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
VGLL1Q99990 TGFBRAP1-202ENST00000393359 5979 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
VGLL1Q99990 JMJD8-202ENST00000562111 823 ntTSL 2 BASIC18.91■□□□□ 0.62
VGLL1Q99990 CFAP99-207ENST00000635017 2298 ntTSL 5 BASIC18.9■□□□□ 0.62
VGLL1Q99990 AL449106.1-201ENST00000608517 1980 ntBASIC18.9■□□□□ 0.62
VGLL1Q99990 REXO4-202ENST00000371942 2360 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
VGLL1Q99990 MARCKSL1-201ENST00000329421 1699 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
VGLL1Q99990 HTRA1-201ENST00000368984 2120 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
VGLL1Q99990 MAF-202ENST00000393350 6384 ntAPPRIS ALT2 BASIC18.9■□□□□ 0.62
VGLL1Q99990 NAA50-207ENST00000493900 962 ntAPPRIS ALT1 TSL 2 BASIC18.9■□□□□ 0.62
VGLL1Q99990 AC108673.1-201ENST00000510422 1159 ntBASIC18.9■□□□□ 0.62
VGLL1Q99990 SUZ12P1-203ENST00000578195 985 ntBASIC18.9■□□□□ 0.62
VGLL1Q99990 FSD1-201ENST00000221856 1831 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
VGLL1Q99990 FAM120AOS-202ENST00000423591 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC18.9■□□□□ 0.62
VGLL1Q99990 C8orf58-202ENST00000409586 2021 ntAPPRIS ALT2 TSL 2 BASIC18.9■□□□□ 0.62
VGLL1Q99990 HNRNPLP2-201ENST00000568980 1570 ntBASIC18.89■□□□□ 0.62
VGLL1Q99990 CSNK1E-203ENST00000396832 2791 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.62
VGLL1Q99990 NRARP-201ENST00000356628 1770 ntAPPRIS P1 BASIC18.89■□□□□ 0.61
VGLL1Q99990 NRBF2-202ENST00000435510 1816 ntTSL 2 BASIC18.89■□□□□ 0.61
VGLL1Q99990 PPP1R14B-201ENST00000309318 982 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
VGLL1Q99990 VRK2-202ENST00000412104 1916 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
VGLL1Q99990 IRAK1-205ENST00000429936 2127 ntTSL 5 BASIC18.89■□□□□ 0.61
VGLL1Q99990 MAPK8IP1P1-201ENST00000574657 1439 ntBASIC18.89■□□□□ 0.61
VGLL1Q99990 SYT12-205ENST00000527043 1661 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
VGLL1Q99990 ZNF692-201ENST00000306601 1931 ntAPPRIS P3 TSL 1 (best) BASIC18.88■□□□□ 0.61
VGLL1Q99990 MIR6090-201ENST00000622481 60 ntBASIC18.88■□□□□ 0.61
VGLL1Q99990 OSBP-201ENST00000263847 5083 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
VGLL1Q99990 ZNF653-201ENST00000293771 2240 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
VGLL1Q99990 CDPF1-201ENST00000314567 1875 ntAPPRIS P2 TSL 1 (best) BASIC18.87■□□□□ 0.61
VGLL1Q99990 DDAH2-212ENST00000375789 1688 ntAPPRIS P1 TSL 2 BASIC18.87■□□□□ 0.61
VGLL1Q99990 DDAH2-213ENST00000375792 1688 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
VGLL1Q99990 GKAP1-202ENST00000376365 1511 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
VGLL1Q99990 LCNL1-201ENST00000408973 1839 ntAPPRIS P1 TSL 2 BASIC18.87■□□□□ 0.61
VGLL1Q99990 FBXL8-206ENST00000519917 1460 ntAPPRIS P1 TSL 5 BASIC18.87■□□□□ 0.61
VGLL1Q99990 AC009690.3-201ENST00000569547 1902 ntAPPRIS P1 TSL 2 BASIC18.87■□□□□ 0.61
VGLL1Q99990 PDCD2-215ENST00000614056 1287 ntTSL 2 BASIC18.87■□□□□ 0.61
VGLL1Q99990 EI24-212ENST00000615917 1407 ntTSL 2 BASIC18.87■□□□□ 0.61
VGLL1Q99990 GATA3-AS1-201ENST00000355358 2214 ntTSL 2 BASIC18.86■□□□□ 0.61
VGLL1Q99990 ESRRA-203ENST00000406310 2218 ntAPPRIS ALT1 TSL 1 (best) BASIC18.86■□□□□ 0.61
VGLL1Q99990 TOP1MT-208ENST00000519148 1868 ntTSL 2 BASIC18.86■□□□□ 0.61
VGLL1Q99990 PRKAR1B-203ENST00000403562 1917 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
VGLL1Q99990 CFAP73-201ENST00000335621 1514 ntAPPRIS P1 TSL 5 BASIC18.85■□□□□ 0.61
VGLL1Q99990 TAZ-205ENST00000475699 1862 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
VGLL1Q99990 NXPH4-201ENST00000349394 1804 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
VGLL1Q99990 RUNX2-203ENST00000371436 1588 ntAPPRIS ALT2 TSL 5 BASIC18.85■□□□□ 0.61
VGLL1Q99990 LINC00273-201ENST00000539813 1452 ntBASIC18.84■□□□□ 0.61
VGLL1Q99990 TCEA2-202ENST00000343484 1235 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
VGLL1Q99990 AL133346.1-201ENST00000435287 495 ntTSL 2 BASIC18.84■□□□□ 0.61
VGLL1Q99990 DDX42-201ENST00000359353 2783 ntTSL 5 BASIC18.84■□□□□ 0.61
VGLL1Q99990 MAGI2-217ENST00000629359 6704 ntTSL 5 BASIC18.84■□□□□ 0.61
VGLL1Q99990 ANKRD53-203ENST00000441349 1797 ntTSL 5 BASIC18.83■□□□□ 0.61
VGLL1Q99990 FEZ1-201ENST00000278919 1748 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
VGLL1Q99990 ADAT3-201ENST00000329478 1620 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
VGLL1Q99990 MFAP2-202ENST00000375535 1260 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
VGLL1Q99990 CLPTM1L-201ENST00000320895 2500 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
VGLL1Q99990 TBL1X-201ENST00000217964 5871 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
VGLL1Q99990 AC091060.1-201ENST00000623524 1766 ntBASIC18.83■□□□□ 0.6
VGLL1Q99990 F8A1-201ENST00000610495 1713 ntAPPRIS P1 BASIC18.83■□□□□ 0.6
VGLL1Q99990 ACSS1-203ENST00000432802 2438 ntTSL 2 BASIC18.82■□□□□ 0.6
VGLL1Q99990 SKOR2-203ENST00000620245 3048 ntAPPRIS ALT2 TSL 5 BASIC18.82■□□□□ 0.6
VGLL1Q99990 FLT1-202ENST00000539099 1911 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
VGLL1Q99990 GPR150-201ENST00000380007 2065 ntAPPRIS P1 BASIC18.81■□□□□ 0.6
VGLL1Q99990 TMEM150A-202ENST00000334462 1518 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
VGLL1Q99990 NKIRAS2-202ENST00000316082 833 ntTSL 5 BASIC18.81■□□□□ 0.6
VGLL1Q99990 PGAM5-201ENST00000317555 1182 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
VGLL1Q99990 DUX4L28-201ENST00000623687 678 ntBASIC18.81■□□□□ 0.6
VGLL1Q99990 ZNF470-206ENST00000601902 1640 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
VGLL1Q99990 TIGD3-201ENST00000309880 2012 ntAPPRIS P1 TSL 2 BASIC18.81■□□□□ 0.6
VGLL1Q99990 PTPA-202ENST00000347048 1989 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
VGLL1Q99990 DHFR-203ENST00000505337 1719 ntAPPRIS P1 TSL 2 BASIC18.8■□□□□ 0.6
VGLL1Q99990 HOPX-206ENST00000503639 1248 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
VGLL1Q99990 LYNX1-208ENST00000615007 1293 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
VGLL1Q99990 GATA4-209ENST00000622443 1982 ntTSL 5 BASIC18.79■□□□□ 0.6
VGLL1Q99990 SETBP1-202ENST00000426838 1785 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
VGLL1Q99990 SNTA1-201ENST00000217381 2342 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
VGLL1Q99990 VSIG8-201ENST00000368100 1818 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
VGLL1Q99990 CAPN10-204ENST00000354082 1999 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
VGLL1Q99990 OTUD5-203ENST00000396743 2682 ntAPPRIS ALT1 TSL 1 (best) BASIC18.78■□□□□ 0.6
VGLL1Q99990 TSEN34-204ENST00000429671 1912 ntTSL 2 BASIC18.78■□□□□ 0.6
VGLL1Q99990 NELFB-202ENST00000634710 1887 ntAPPRIS P2 TSL 1 (best) BASIC18.78■□□□□ 0.6
VGLL1Q99990 LYPD6B-203ENST00000409642 1577 ntAPPRIS P3 TSL 1 (best) BASIC18.78■□□□□ 0.6
VGLL1Q99990 DOCK5-202ENST00000410074 786 ntTSL 2 BASIC18.78■□□□□ 0.6
VGLL1Q99990 NELFB-201ENST00000343053 2698 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.6
VGLL1Q99990 GTF2IP1-204ENST00000616377 2632 ntTSL 2 BASIC18.77■□□□□ 0.6
VGLL1Q99990 ANKRD53-201ENST00000272421 2185 ntAPPRIS P3 TSL 1 (best) BASIC18.77■□□□□ 0.6
VGLL1Q99990 S100A10-202ENST00000368811 1202 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
VGLL1Q99990 MSANTD2-203ENST00000524950 1109 ntTSL 2 BASIC18.77■□□□□ 0.6
VGLL1Q99990 CNNM2-201ENST00000369875 2059 ntTSL 1 (best) BASIC18.77■□□□□ 0.59
VGLL1Q99990 OVOL2-201ENST00000278780 1555 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
VGLL1Q99990 EBF4-210ENST00000609451 2012 ntAPPRIS ALT1 TSL 5 BASIC18.76■□□□□ 0.59
VGLL1Q99990 ST6GALNAC6-204ENST00000373144 2406 ntAPPRIS ALT1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Retrieved 100 of 98,524 protein–RNA pairs in 12.5 ms